SUPPLEMENTARY MATERIAL Facile synthesis of tetrahydroprotoberberine and protoberberine alkaloids from protopines and study on their antibacterial activities Pi Cheng ab*, Bin Wang c, Xiubin Liua, Wei Liua, Weisong Kang c, Jie Zhouc and Jianguo Zeng abc* a Pre-State Key Laboratory for Germplasm Innovation and Utilization of Crop, Hunan Agricultural University, Changsha, Hunan 410128, China b National Research Center of Engineering Technology For Utilization of Functional Ingredients From Botanicals, Hunan Agricultural University, Changsha, Hunan 410128, China c School of Pharmaceutical, Hunan University of Chinese Medicine, Changsha, Hunan 410128, China *Corresponding authors: E-Mail: picheng55@126.com (Pi Cheng); ginkgo@worldway.net (Jianguo Zeng); Tel.: +86-731-8468-6560; Fax: +86-731-8468-6560. 1 Facile synthesis of tetrahydroprotoberberine and protoberberine alkaloids from protopines and study on their antibacterial activities A series of isoquinoline alkaloids including tetrahydroprotoberberines, Nmethyl tetrahydroprotoberberines and protoberberines were facile synthesized with protopines as starting material. All compounds were evaluated for their antibacterial activities against four pathogenic bacteria E. coli, S. aureus, Avian Staphylocosis and S. choleraesuis. Experimental results indicated that protoberberines were the most active compounds to the target bacteria among the tested alkaloids. It was suggested that planar molecule with high aromatization level (eg. coptisine 5 and berberine 6) or a positive charge of the molecules (eg. N-methyl tetrahrydroprotoberberines 11 and 12) had a positive influence on the antibacterial effects. Keywords: protopines; isoquinoline alkaloids; synthesis; antibacterial activities 1 Experimental 1.1 Chemistry Column chromatography silica gel (200-300 mesh) and TLC plate (Qingdao Meijin Chemical Inc.; Qingdao; China); 1H NMR and 13 C NMR spectra were recorded on Bruker 400M spectrometers and chemical shifts were given in with TMS as an internal reference. HRMS data were obtained on an Agilent UPLC-QTOF(6530) instrument. All the reagents are commercially available. Protopine and allycryptopine isolated from M. cordata. 1.1.1. Synthesis of N-Methyl-13,14-dehydrostylopinium (3) and N-Methyl-7,8dihydroberberine (4) To a solution of protopine (1) or allycryptopine (2) (2 mmol) in chloroform (30mL), oxalyl chloride (1.6 mL) was added and the mixture refluxed for 1h. After this period, the solvent was removed in vacuum. The reaction crude was purified on silica column eluted by dichloromethane/methanol/acetone(7.5:1:0.1)to provide compounds 3 and 4 respectively. 1.1.2. Synthesis of Coptisine (5) and Berberine (6) A solution of compound 3 or 4 (0.5 mmol) in DMSO (10 mL) was heated at 115°C for 1.5 h. The solvent was removed in vacuum at 80 °C for 24 h to give a residue. The 2 residue was purified on silica column chromatography eluted by dichloromethane/methanol/acetone ( 7.5:1:0.1 ) to provide compounds 5 and 6 respectively. 1.1.3. Synthesis of Stylopine (7) and Canadine(8) To a solution of compounds 5 or 6 (0.5 mmol) in methanol (15 mL), NaBH4 (380mg, 10mmol) was added in 15min and the reaction mixture was stirred for 24h. Then the reaction mixture was poured to ice-cooled water and extracted with chloroform. The organic solvent was removed in vacuum to give a residue which was further purified on silica column with chloroform/acetone (10:0.2) as eluant to afford the desired compounds. 1.1.4. Synthesis of Dihydroprotopine (9) and Dihydroallycryptopine (10) To a solution of protopine or allycryptopine (1 or 2, 10 mmol) in methanol (100 mL), NaBH4 (3.8g, 100mmol) was added and the mixture was refluxed for 48h. The solvent was removed in vacuum. Water 100 mL was added to the residue and the mixture was extracted with chloroform. The organic solvent was dried over Na2SO4, concentrated and purified by column chromatography (hexane/acetone/triethylamine, 3:2:0.1) to give the target compound. 1.1.5. Synthesis of N-methyl stylopine (11) and N-methyl tetrahydroberberine (12) To a solution of dihydroprotopine (9) dihydroallycryptopine (10) (1mmol) in chloroform (50 mL), a few drops of TFA were added and the mixture was stirred for 0.5 h. The reaction mixture was then evaporated and the residue was purified on silica gel chromatography eluted by dichloromethane/MeOH/triethylamine (7.5:1:0.1) to provide the target compound. 1.2. General procedure for anti-bacteria assay 1.2.1. Kirby-Bauer experiments Compounds 1-4 and their derivatives were screened for their antibacterial activity using the Kirby-Bauer paper disc diffusion method (Melaiye et al., 2004; Kong et al., 2008). S. aureus, Avian Staphylocosis and S. choleraesuis were used as the test bacteria. The test compounds were dissolved in 20% DMSO at a concentration of 1mgmL-1 and a paper disc (d = 6 mm) was evenly soaked with 100 L compound solution, and then dried in an oven at 40°C and placed on an agar plate seeded with the 20–24 h cultured fresh bacteria at 28°C. After incubation for 24 h at 37°C, the 3 diameter of the inhibitory zone around the disc was measured. A paper disc saturated with 20% DMSO was used, after drying, as a negative control. Mequindox was used as positive control. 1.2.2 Determination of MIC and MBC MIC and MBC values of all compounds were determined by the turbidity method with slight modification, using S. aureus, Avian Staphylocosis and S. choleraesuis as the test bacteria. A Baird-Parker agar (BPA) broth consisting of beef extract (0.3%), peptone and NaCl (0.5%) was used for culturing the test bacteria. A 24 h cultured broth diluted by the same broth to 2.2×107 colony forming units (CFU) for S. aureus, Avian Staphylocosis and S. choleraesuis, 3.6×107CFU for E. coli to serve as inocula. The test sample was dissolved in 20% DMSO, and 20 mL of the resulting solution added to a first tube containing 980 L of BPA broth. Two-fold serial dilutions made by adding the same BPA broth to obtain concentrations from 400 gmL-1 to 3.12 gmL-1. A bacterial suspension (0.5 mL) was added to each tube and incubated for 24 h at 37°C for bacteria. The MIC determined by visually judging the bacterial growth in the series of test tubes, which was defined as the lowest concentration at which no bacterial growth was observed after incubation. The MBCs were determined by inoculating the surfaces of Mueller-Hinton agar (MHA) plates with 25 mL of the samples taken from the clear tubes the MIC determination. After the bacterial suspensions had fully absorbed into agar, the plates were further incubated at 28°C for 24 h and were examined growth in daylight. The MBC was defined as the concentration at which no colony was observed after incubation. All experiments were performed in triplicate. 1.3 Original spectra of typical synthetic compounds 1.3.1 ESI-HRMS and 1H-NMR spectra of compound 3 4 1.3.2 ESI-HRMS and 1H-NMR spectra of compound 4 1.3.3 ESI-HRMS and 1H-NMR spectra of compound 5 5 1.3.4 ESI-HRMS and 1H-NMR spectra of compound 6 6 1.3.5 ESI-HRMS and 1H-NMR spectra of compound 7 1.3.6 ESI-HRMS and 1H-NMR spectra of compound 8 7 1.3.7 ESI-HRMS and 1H-NMR spectra of compound 10 1.3.8 ESI-HRMS and 1H-NMR spectra of compound 12 8 Acknowledgements This work was financially supported by the Important Science & Technology Specific Projects of Hunan province (No. 2012FJ1004), the Talent Introduction Project in Hunan Agricultural University (No. 11YJ04) and TCM Scientific Research Project (No. 201259) of state Administration of Traditional Chinese Medicine of Hunan Province). References Melaiye, A., Simons, R.S., Milsted, A., Pingitore, F., Wesdemiotis, C., Tessier, C.A., Youngs, W.J. (2004). 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