Supplementary Figure Legends Figure S1 Targeting vector for the inducible deletion of the DNase II gene. The wild-type DNase II gene, targeting vector, targeted allele (3 lox), flox allele, Cre-mediated deletion allele (DNase II), and previously established DNase II-null allele are shown schematically. Black boxes represent exons of the DNase II gene. Closed triangles represent the loxP sequence. The PGK-promoter-driven neo gene and DNA coding for the diphtheria toxin A fragment (DT-A) are indicated by boxes. The probe used for Southern hybridization in Fig. S2 is indicated by a filled box below the wild-type allele. Some recognition sites for major restriction enzymes (B, Bam HI; E, Eco RV; Sm, Sma I; H, Hind III; X, Xho I; SI, Sac I; Nc, Nco I; Nr, Nru I; Xm, Xmn I, and SII, Sac II) are indicated. The recognition sites destroyed during vector construction or recombination are in parenthesis. A 1.0-kb size marker is shown. Figure S2 Inducible deletion of the DNase II gene. Left panel, chimeric mice generated with an ES clone carrying the DNase II3lox/+ allele were mated with C57/BL6 mice. These mice were crossed with transgenic mice carrying E2a-Cre to generate mice carrying the DNase IIflox/+ allele. Tail DNA was prepared from DNase II+/+ (lane 1) and DNase II3lox/+ (lane 2) mice, digested with Sac I, and subjected to Southern hybridization with the probe. Bands for the wild-type (WT) and targeted allele (3lox) are indicated by arrowheads. Right panel, DNase IIflox/-Mx1-CreT (lane 3) or DNase II+ /+Mx1-CreT mice (lane 2) at age 4-6 weeks were treated with poly(I:C). Two months later, DNA was prepared from the spleen, digested with Nco I, and analyzed by Southern hybridization. DNA from untreated DNase IIflox/+ mice (lane 1) was analyzed as a control for the wild-type and lox alleles. Bands for the conditionally deleted allele (delta), null allele (null), and wild-type/ floxed allele (WT or flox) are indicated by arrowheads. Figure S3 No expression of DNase II mRNA in poly(I:C)-treated mice. Four to six-week-old DNase IIflox/- mice were treated with poly(I:C), and RNA was prepared from the bone marrow and spleen at the indicated time. DNase II mRNA was quantified by real-time PCR, and expressed as a value relative to -actin. There were 3-5 mice in each group, and their average values are plotted with S.D.(bars).