2.2 Structure-property relationships A deeper look into the molecule

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2.2 Structure-property relationships

A deeper look into the molecule

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Review: Different elements can combine either with ionic or covalent bonds

Na is a metal

Si is a semimetal

Cl is a nonmetal

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Let’s review how to draw Lewis structures (line-bond structures)

1. List how many valence electrons each element has

2. Put the CENTRAL ATOM in the middle, put all other atoms around it

3. Draw all the valence electrons around each atom as dots

4. connect 2 dots between each atoms as a single bond

5. Count to see if hydrogens have 2 electrons, and everything else has 8 electrons (octet)

6. Add multiple bonds if needed.

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Let’s try some structures.

Underlined are the central atoms

CHCl

3

(chloroform)

H

2

O

2

(hydrogen peroxide)

HCN (hydrogen cyanide)

CH

3

COCH

3

(acetone)

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We also realize certain patterns…

Hydrogen atoms form one bond

Carbon atoms form four bonds

Nitrogen atoms form three bonds

Oxygen atoms form two bonds

Halogens form one bond when they are surrounding atoms; Fluorine is always a surrounding atom

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Let’s recall that some ions are molecules…

OH

NH

CO

CN -

-

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4

3

2to be able to deal with charges, we need to add or subtract the number of electrons accordingly

We need to add these electrons to the more electronegative (electronloving) atoms.

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Formal charges helps us keep track of charges on our molecule

FORMAL charges can be calculated as:

FC = valence electrons –

(#of surrounding electrons + #of bonds)

The sum of all formal charges in a molecule will be the overall charge.

Go back to check the OH- ion.

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Let’s try the carbonate ion CO

3

2found in CaCO

3

(lime/corals/shells/toothpaste… putting the extra electrons on it.

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Let’s now try: H

3

O + the hydronium ion, which is the acidified form of water. (vs. OH )

Since it’s a positive ion, we need to

REMOVE electrons.

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Do these:

OH -

NH

CN -

4

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Let’s review again how to draw

Lewis structures

1. List how many valence electrons each element has. Check if the structure is an ion. We’ll need to add/subtract electrons if ever.

2. Put the CENTRAL ATOM in the middle, put all other atoms around it

3. Draw all the valence electrons around each atom as dots, adding or removing necessary electrons for ions

4. Connect 2 dots between each atoms as a single bond

5. Count to see if hydrogens have 2 electrons, and everything else has 8 electrons (octet)

6. Add multiple bonds if needed.

7. Check formal charges. Add them up for the total ion charge.

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In reality we can find bonds that aren’t pure single or double bonds…

RESONANCE STRUCTURES are sort of the different versions of the same thing. In fact the true structure is somewhat of an average of the different resonance structures.

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In reality we can find bonds that aren’t pure single or double bonds…

OZONE is an allotrope of oxygen O

3 instead of normal O

2

What is a possible Lewis structure?

It absorbs UV light from the sun, protecting us, and it’s just a thin layer 3mm thick on average.

There’s a thinning/depleted area naturally occurring but also possible human interferences!

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QUIZ #5 For 1-4 a. Draw the Lewis structures of the ff. b. Show formal charges for each atom

1. H

2

S a very poisonous gas (2 pts)

2. C

2

H

2 acetylene, a gas used as fuel in welding (3 pts)

3. pts)

NO

3

nitrate anion the biologically used form of nitrogen, Oxygen is more electron-loving than Nitrogen. (4

4. Draw a possible resonance structure of the nitrate ion (1 pt)

BONUS: name the ion: ______everyday waiting for you/ Darling don't be afraid I have loved you/ For a

thousand years/I'll love you for a thousand more (1pt)

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3D STRUCTURES –

VSEPR theory

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VSEPR = valence shell electron pair repulsion

Lewis structures have either atoms or

electron pairs surrounding our central atom

We treat these as groups that repel each other (same negative charges will repel each other)

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Depending on the number of electron groups, we’ll have different main geometries

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Linear Molecules

AX

2

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Trigonal planar molecules: AX

3

AX

2

E

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Tetrahedral molecules: AX

4

, AX

3

E,

AX

2

E

2

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Trigonal Bipyramidal AX

5

, AX

4

E,

AX

3

E e

, AX

2

E

3

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Octahedral, AX

6

, AX

5

E, AX

4

E

2

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Let’s try more structures now, and then determine their: 1. AXE notation 2. Electron domain geometry 3. Molecular geometry

CHCl

3

(chloroform)

HCN (hydrogen cyanide)

CH

3

COCH

3

(acetone)

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More!

ClO

3

(chlorate ion)

CO

3

2(carbonate ion AGAIN!)

I

3

(triiodide ion)

BrF

5

XeF

4

ClF

3

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Molecular structures bring about so much of a molecule’s functionality.

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Molecular structures bring about so much of a molecule’s functionality.

DNA retinal

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