BIOLOGY101COURSESYLLABUSFORSPRING2016 CourseDescription Biology101isthefirstofatwo-semesterintroductorycoursesequencedesignedprimarilyforsciencemajors.Itcovers somecentralconceptsinbiology.Topicsincludemolecules,cells,enzymes,photosynthesis,cellularrespiration,cellular reproduction,genetics,andbiotechnology.Thelaboratoryincludesbasiclaboratoryskillssuchassafety,microscopeuse, andmeasurement,anditreinforcestopicsdiscussedinlecture. ThiscoursemeetstheSUNYGeneralEducationcourserequirementsfornaturalsciences. CreditHours:4;ContactHours:5 Instructor Dr.MichaelGregory Office:219T,Phone:562-4336 OfficeHours:M12:00-1:30,W12:00-12:30,Th10:00-12:00,F1:15-2:15 E-mail:Michael.Gregory@clinton.edu MaterialandInternetRequirements Textbook–BiologybyOpenStaxCollege.Thisisafree,onlinetextbook.Thetextbookcanbedownloadedorviewedonline usingthefollowingURL:https://www.openstaxcollege.org/textbooks/biology/get Safetyglasses Quad-ruledcompositionnotebook AccesstotheInternet. TheBiologyWeb(http://faculty.clinton.edu/faculty/Michael.Gregory/Default.htm) containsthelabmanual,lecturenotes,andotherresourcesneededforthecourse.Alinkto facultywebsitescanbefoundonthecollegehomepage(http://www.clinton.edu/). StudentswillberequiredtousetheAngelonlinecoursemanagementsystemforsomeof theassignmentsinthiscourse. StudentsarerequiredtochecktheirClintonCommunityCollegee-mailregularly throughoutthesemester.ImportantcourseannouncementswillbemadeviaCCCstudent e-mailaccounts. Prerequisite:PlacementintoMAT100orhigher;StudentsreceivingcreditforBIO101and/orBIO102 cannotreceivecreditforBIO100 Corequisite:ENG101–EnglishCompositionorequivalent;SCI110–FoundationalSkillsinScience TheBiologyWeb TopicsandReadingAssignments Eachreadingassignmentsinthetablebelowshouldbecompletedwhenthetopicisdiscussedinclass. Topic Introduction Life NaturalSelection Science Chemistry OrganicChemistryandBiochemistry Cells Membranes Energy,Enzymes,Metabolism GlycolysisandCellularRespiration Photosynthesis Mitosis Meiosis Genetics:Genes Genetics:Chromosomes DNA GeneExpression ControlofGeneExpressioninProkaryotes Biotechnology Reading (textbookchapter) 1 Exam Exam1 2.1,2.2 2.3,3 4 5 6 7 8 10 11.1 12 13 14 15 16 17 Exam2 Exam3 Part1ofFinalExam Laboratory LabDate 1/26 2/2 Topic Introduction,LabSafety MetricMeasurement StatisticsandGraphing 2/9 WhatisScience? 2/16 2/23 3/1 3/8 3/22 3/29 4/5 4/12 Microscopy Biochemistry Biochemistry(Cont.) Cells Enzymes CellularRespiration Photosynthesis MitosisandMeiosis 4/19 4/26 5/3 FinalsWeek Nondisjunction PedigreeAnalysis BacterialTransformation DNAProfiling DueDate Thedayofthenextlab Submission Onlineandlabnotebook Groupreport,dueatthebeginningofthenext Inclass lab Formallabreport:DuethedayoftheCellslab Labnotebookandformal (in4weeks). labreport Labnotebookswillbecollectedtoday. Labnotebook Drawings:beginningofnextlab Questions:nextlabday Nextlabday Nextlabday Labnotebook Labnotebook Labnotebook Labnotebook Drawings:inclass Questions:online(Angel) Online(Angel) Online(Angel) Labnotebook Labnotebook Labnotebook Youshouldreadthelaboratoryexercisesbeforecomingtolabsothatyouhaveafamiliaritywiththeprocedureforthelab. Ifthelaboratoryexerciseinvolvesexperimentation,youshouldprepareahypothesisforeachexperiment. 2 Grading GradingScale A A- B+ B B- C+ 90-100% 87-89% 84-86% 80-83% 77-79% 74-76% C C- D+ D F 70-73% 67-69% 64-66% 57-63% <57% FinalGrade Item Lectureexams(3) Finalexam(Halfofthisexamiscumulative.) Classassignments Labreports–duethefollowingweek Formallabreport Labnotebook %ofFinalGrade 39(13%each) 26(13%eachhalf) 9 9 8 9 ExamandQuizSchedule LectureExamDates Exam Date Exam1* 2/22 Exam2* 3/25 Exam3* 4/15 FinalExam Finalsweek *Datesforthefirstthreeexamsmaychange.Allchangeswillbeannouncedinclass. FinalsWeek Classesdonotmeetattheirnormallyscheduledtimesduringfinalsweek.BIO101willmeettwotimesfor2.5hourseach time.ThedatesandtimesforeachsectionofBIO101willbeannouncedlater. Make-upExams Ifanexamcannotbetakenduringtheregularlyscheduledtime,amake-upexamcanbetakenlater.Make-upexamsmay containmostlyessayandshort-answerquestions. Assignments Duedatesforthereadingassignmentswillnotbeannouncedduringclasstime.Eachreadingassignmentsshouldbe completedwhenthetopiciscoveredinclass. Studentsarerequiredtokeepbackupcopiesofallsubmittedassignmentsuntiltheendofthesemester.Cellphone camerasareconvenientforphotographinghandwrittenmaterialsforbeforesubmittinginclass.Photographs,photocopies, scans,orcomputerfilesareallgoodmethodsforkeepingbackupcopies. Allwrittenassignmentsshouldbecompletedusingwholesentences.Abbreviatedwordsshouldnotbeused. 3 Allsubmittedworkmustbeinyourownwords.Ifyouworkwithapartneronanassignmentthatrequiresindividual submission,youmustsubmityourowndocumentusingyourownwords.Youmayobtainordiscussanswerstothe exercisesfromanysourcethatisapplicable,butyoumustuseyourownwordstoanswerthequestionsorwritethe reports.Documentsthatappeartohavebeencopiedfromotherswillnotreceiveagrade(grade=0). Ifyouuseinformationfromanothersourceinanassignment,itmustbestatedinyourownwords.Whileitislegaltocopy word-for-wordifitisproperlycited,thisisusuallypoorwritingstyleanditisnotallowedinthiscourse.Inadditionto rewording,youmustalsostatewheretheinformationcamefrom.Forpurposesofthiscourse,itisnotnecessarytostate thesourceofinformationobtainedfromthecoursetextbookorTheBiologyWeb.Allothersourcesofinformationshould beidentified. Assignmentssubmittedinclassaredueatthebeginningofclassontheduedate.Assignmentsthatareturnedinafterclass hasstartedontheduedatewillbeconsidered1daylate.Assignmentssubmittedonlinemustbesubmittedbefore midnightontheduedate. Scoresonallassignmentsexcepttheformallabreportwillbereducedby10%oftheirtotalpossiblepointvalueiftheyare onedaylateand20%iftheyaretwodayslate.Theywillnotbeacceptedaftertwodays.Scoresontheformallabreport willbereduced1%foreachdaylate.Allassignmentsandmake-upexamsmustbecompletedbeforefinalsweekbegins. Attendance Theinstructorreservestherighttowithdrawstudentsthatmissmorethan8classes(includinglabs)ormorethan2labs. Thelaboratoryclassisdesignedtoprovidehands-onlearningexperiences.Studentswilllearnbasiclaboratoryskillswhile reinforcingconceptslearnedinlecture.Toalargeextent,gradesinthelaboratorywillreflectparticipationandlaboratory skillsacquired,soitisimportantthatstudentsdonotmisslaboratoryexercises. Absencescannotbemadeup.Thisincludesabsencesfromthelaboratoryorfromlectureclasses. Studentsarerequiredtoattendlectureandlaboratoryclassesfortheentireperiod.Studentsthatarrivelateorleaveearly willbemarkedasabsent.Similarly,studentsthatsleepduringclassordonotparticipateinclassactivitieswillbemarkedas absent. ExtraCredit Extracreditisnotavailableinthiscourse.Thetopicsandassignmentslistedinthesyllabushavebeenselectedasthebest waytomeetthecourseobjectives. E-mailCommunication Studentsareencouragedtomaintainfrequentcommunicationwiththeirinstructor.E-mailisaconvenientwaytoask questionsaboutanyofthematerialcoveredinthecourse.Pleaseaskquestionsonanymaterialthatisnotclearly understood. E-mailfromstudentsshouldcontainaminimumlevelofprofessionalcourtesy.Forexample,itshouldnotcontain abbreviationssuchas"u"insteadof"you"anditshouldnotcontainincorrectcapitalizationsuchas"i"insteadof"I." Sentencesshouldbeginwithacapitalletterandendwithaperiod.Theinstructorwillnotreadorreplytoe-mailmessages thatcontainthesegrammaticalerrors. 4 AcademicIntegrity AcademichonestyisexpectedofallClintonCommunityCollegestudents.Itisdishonesttomisrepresentanotherperson’s workasone’sown,totakecreditforsomeoneelse’sworkorideas,toaccepthelponatest,toobtainadvanced informationonconfidentialtestmaterials,ortointentionallyharmanotherstudent’schancesforacademicsuccess. StudentswithDisabilities Ifyouhave,orsuspectthatyoumayhaveanytypeofdisabilityorlearningproblemthatmayrequireextraassistanceor specialaccommodations,pleasespeakwithmeprivatelyafterclassorduringmyofficehoursassoonaspossiblesothatI canhelpyouobtainanyassistanceyoumayneedtosuccessfullycompletethiscourse.YoushouldalsocontactLaurie Bethka,EXT252(room420M)forfurtherassistance. CourseContinuityPlan Inthecasethatthecollegeofficiallyclosesbecauseofanemergencythatcausesashort-termdisruptionofthiscourse,we willusee-mailtocontinuethiscourseintheshortterm(1-3weeks).Allstudentsmustusetheircampuse-mailtoreceive courserelatedinformation. TutoringCenter TheTutoringCenterprovidestutoringservicesforallstudentsenrolledatClintonCommunityCollege.TheTutoringCenter staffworkswithstudentstodevelopstudyskillsandstrategiesforacademicsuccess.Tutorsareavailabletoassiststudents inmath,science,writing,reading,computersandsomespecializedtechnologycourses.TheCenter,locatedonthe4thfloor ofthemainbuildingroom412M,offersindividualandsmallgrouptutoringservices.Onlinetutoringisalsoavailable.For moreinformationaboutthetutoringschedulegotohttp://www.clinton.edu/tutoringcenter/tutorschedule.cxml. Changes Thedetailsofthissyllabus,includingtopicscovered,calendar,grading,gradingscale,andattendancepolicyaresubjectto change.Changesinthegradingscalewillbelimitedtothosethatresultinimproved(curved)grades.Youwillbeinformed inclassofanychanges.AllchangestothesyllabuswillalsobepostedontheInternetinTheBiologyWeb. TechnologyStatement ACCCstudentshouldexpectthatanyclassmayrequiresomecourseactivitythatusesacomputerandthe internet.Activitiescouldincludebutarenotlimitedtoaccessingthecoursesyllabus,schedule,orotherhandoutsona website,completinghomeworkonline,takingquizzesorsubmittingwrittenwork,participatinginadiscussionor sending/receivingemail. CourseObjectives Astheresultofinstructionalactivities,studentswillbeableto: 1. Compareandcontrastthestructureandfunctionofprokaryoticandeukaryoticcells. • • Compareprokaryoticandeukaryoticcells. Compareplantandanimalcellstructuresandtheirfunctions. 2. Demonstratetheproperuseofcompoundanddissectingmicroscopes. 3. Explainthestructureandfunctionofthefourmajorclassesofbiologicalmolecules. 4. Describecellmembranestructureandfunctioninactive,passive,andfacilitatedtransport. 5 5. Describehowthephysicalandchemicalenvironmentaffectsenzymeactivity. 6. Explaintheprocessesofphotosynthesisandcellularrespirationandtheirrelationshiptoeachother. • • • • Describehowplantsmodifytheirenvironment(photosynthesis) Describetheprocessofcellularrespiration Explaintherelationshipbetweenphotosynthesisandcellularrespiration Describetheprocessofchemiosmoticphosphorylation 7. ExplainhowgeneticinformationisstoredinDNAandtranslatedintoprotein. • • • • ComparethemolecularstructuresofDNAandRNA. DescribeDNAsynthesis. Describetranscriptionandtranslation. Describethestructureofchromosomes. 8. Describethemechanicsofmitosisandmeiosisandtherelationshipoftheseprocessestoreproductionandfunction. • • • Describethebeginningandendingproductsofmitosis,includingtherelationshipofthisprocesstogrowth,repair, andchromosomenumber. Identifyanddescribethestagesforthecellcycle Describethebeginningandendingproductsofmeiosis,includingtherelationshipofthisprocesstoreproduction, heredity,variation,andreductionofchromosomenumber. 9. Describethemechanismofoperationofthefollowingkindsofreceptors:G-proteinlinked,tyrosinekinase,ionchannel. 10.ExplaintheroleofcAMP,phosphodiesterase,proteinkinases,andproteinphosphatesinsignaltransduction. 11.ApplygeneticprinciplestosimpleMendelianandnon-Mendelianinheritanceproblemsandconcepts. • • • • Applygeneticprinciplestosimpleinheritanceproblems/conceptsincludingmonohybridanddihybridcrosses Describenon-Mendelianinheritanceincludingincompletedominance,codominance,multiplealleles,pleiotrophy, epistasis,genomicimprinting,polygeneticinheritance Compareandcontrasttherelationshipbetweenmutationsandgeneticdisorders Usepedigrees/karyotypestoexaminetheinheritanceofgeneticdisorders. 12.Explainadvantagesanddisadvantagesofusinggeneticengineeringtechniquestodayinplants,humansandother animalsandtheethicalissuesrelatedtobiotechnology. LabObjectives Thelaboratoryexperiencewillreinforcebiologicalconceptsandlaboratoryskills.Studentswill: • • • • • • • • Compareprokaryoticandeukaryoticorganisms. Investigateplantpigmentsandphotosyntheticprocessesinplants. Comparecellularrespirationandphotosyntheticprocessesusingavarietyoforganisms. Investigateenvironmentaleffectsonenzymecatalysis. Investigatemitoticandmeioticcellularprocesses. ExploreDNAbiotechnology,itsrealworldapplications,andtheuseofelectrophoresisandrecombinantDNA technologytoinvestigatetheseapplications. Analyzedatafromgeneticcrossestoinvestigateindependentassortmentoftwogenes. Investigategenestodetermineautosomalorsex-linkedinheritance. 6 • • • Demonstrateunderstandingofoperatingandusingavarietyofinstrumentationnormallyexpectedtobeusedina biologylaboratorysettingincluding: o HorizontalGelElectrophoresis o CompoundMicroscopes o Micropipettes o Verniersoftwareorcomparabledatacollectionsoftware o Spectrophotometers Uselabdocumentationtorecordalldataandscientificinformationinaboundnotebook. Solveproblemsusingtheprocessofscientificinquiryduringlaboratoryexperimentationincluding: o Developinghypothesesbasedontheobservationofnaturalphenomena. o Designinganexperimentbasedonatestablehypothesis. o Conductinganexperimentusinganappropriateexperimentaldesign. o Recordingandorganizingdataresultingfromquantitativemeasurementusingtablesandgraphs. o Performingappropriatestatisticalanalysesonthedata. o Summarizingthedatausinggraphs,tables,anddescriptivestatistics. o Communicatingthroughwritingtheresultsofascientificinvestigationusingscientificargumentsand explanations. SUNYGeneralEducationKnowledgeAreaLearningOutcomes Studentswilldemonstratetheabilityto: 1.understandthemethodsscientistsusetoexplorenaturalphenomena,including: • • • • • • observation hypothesisdevelopment measurementanddatacollection experimentation evaluationofevidence employmentofmathematicalanalysis 2.applyscientificdata,conceptsandmodelsinoneofthenaturalsciences 7