BIO 529 S04 Exam I Name______________________ ID #_______________________ 1. Fill in the blanks with the best answer from the list provided. (1 pt each) epigenesis fate map induction soma determination gastrulation morphogen autonomous cloning RNAi specification juxtacrine pluripotence commitment nematode enhancer Pax6 vertebrate embryo notochord preformation metazoan conditional microarray morphogenesis blastula totipotence mitosis Wnt deuterostome TGF- epithelium PCR competence amphibian FGF ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ ____________________ epiboly diploblast zygote cleavage stem cell morpholino germ line imprinting instructive meiosis chordate permissive arthropod BMP4 endocrine Hedgehog differentiation Smad chimera triploblast organogenesis larva protostome regulative development in situ hybridization mosaic development JAK-STAT syncytial reverse transcription mesenchyme receptor tyrosine kinase Northern blotting paracrine urochordate targeted knock-out methylation A sheet of tightly connected cells Chemically modified oligonucleotide used to reduce gene activity Organism in which the mouth is the first orifice to develop Theory that organisms develop from a miniature in the gamete Type of specification in which individual cells develop independently Technique to trace all the cell lineages of an organism Ability of a cell to produce many, but not all, fates Ability of a cell to respond to a signal from another cell Type of specification that occurs when the nuclei of an early embryo develop in a common cytoplasm Hybridization technique that provides information about the total size of a mRNA A ligand that stimulates RTK signaling Stage of embryogenesis during which cells are rearranged Signaling that affects very distant cells of the body Organism with a notochord only during embryogenesis Selective inactivation of gene copy from only one parent State in which a cell is irreversibly developing toward a specific fate Type of induction that provides specific information to the responder Organism that is comprised of cells with two different genotypes Use of somatic cell nucleus from one organism to create a new organism Technique that provides the most specific information about the spatial expression of a gene 1 BIO 529 S04 Exam I Name______________________ ID #_______________________ For all remaining questions, you must show your work or explain your reasoning to receive any partial credit. 2. Most eukaryotic embryos are comprised of three primary germ layers. a. Name the three germ layers and provide one example of an adult tissue derived from each. (9 pts) b. What is the name for an organism with only two primary germ layers. (1 pt) 3. Classify the following organisms with respect to the following features. (1 pt each) Organism Animal, Plant, or Protist For Animals: Protostome or Deuterostome For Animals: Dipoblast or Triploblast Xenopus Drosophila Dictyostelium Mouse Arabidopsis 4. Name the three major stages of metazoan embryogenesis (after fertilization) and describe what happens or is characteristic of each stage. (9 pts) 2 BIO 529 S04 Exam I Name______________________ ID #_______________________ 5. You are given an animal whose development has never been characterized before. You note that at the four-cell stage, one blastomere transiently shows red pigmentation. However, as embryogenesis proceeds, the red pigmentation fades and you are unable to determine what becomes of the blastomere in the fully-developed embryo. Describe a simple experiment you can do to determine the fate of the red blastomere. Provide sufficient detail to show that you understand the technique and its interpretation. (10 pts) 6. For the animal described above, you find that the red blastomere at the four-cell stage ultimately gives rise to all of the central nervous system of the embryo. Using this information, devise an experiment to determine whether development in this organism is regulative or mosaic. In addition to describing the experimental procedure, describe the possible results and how you would interpret them. (15 pts) 3 BIO 529 S04 Exam I Name______________________ ID #_______________________ 7. At the early gastrula stage of a Xenopus embryo, the presumptive eye tissue is transplanted into a new embryo that in the region that gives rise to the somitic mesoderm. The resulting transplanted tissue becomes somitic mesoderm. What does that tell you about the presumptive eye tissue of Xenopus at the early gastrula stage? (8 pts) 8. In birds, feathers form from the epidermis after induction by the underlying dermis. The protein Feather Forming Factor (FFF) may be involved in this process. To determine the role of FFF in feather induction, tissue from FFF mutants was mixed with wild-type tissue. Indicate the anticipated results of these mixing experiments for each of the following situations by filling in the table with “Yes” or “No” to indicate whether feathers would form. (9 pts) Dermis PFFWild-type PFF- Epidermis PFFPFFWild-type Feather Formation If… FFF is Competence Factor FFF is Inducer FFF is Not Required 9. The Binary Expression (GAL4) system is commonly used in Drosophila to easily misexpress genes of interest. Using a diagram and words, explain the binary (two) DNA components of this system and how they interact to create misexpression. (10 pts) 4