Analytical Seminar - Literature John Carr October 24, 2003 Ion Trap Mass Spectrometry of Fluorescently Labeled Nanoparticles1 Accurate molecular weight determinations of macromolecular ions with mass ranges in the mega-Dalton (MDa) range are limited in conventional mass spectrometry by a loss in detector efficiency due to the lower impact velocities of large ions.2 Electrospray ionization methods generates ions with a mass to charge (m/z) ratio that allow detection by conventional methods yet generate complicated spectra with decreasing resolution on the high mass end.1,3,4 In this paper, matrix-assisted laser desorption/ionization (MALDI) generates 27 nm ions of fluorescently labeled polystyrene spheres with an average mass of 6.5 MDa.1,5 A dual quadrupole ion trap is utilized where the first trap provides mass discrimination while the second concentrates the ions ejected from the first to be detected through laser induced fluorescence (LIF). Several experimental parameters related to both ion traps are optimized and theoretically discussed. Results of the polystyrene particle mass analysis yield theoretically accurate data with high signal to noise ratios. Application of this technique to a biological molecule was illustrated with the mass determination of fluorescently labeled IgG (goat anti-mouse antibody). Results showed a signal to noise ratio of 10 with a mass resolution greater than five at 1.5 * 105 Da. A brief overview of the problems related to high molecular weight determinations using conventional techniques2,6 will be presented in addition to a description of the dual ion trap experimental setup and parameters. The experimental results and implications will be discussed and direction of further work outlined. References: 1. Y. Cai, W.P. Peng, and H.C. Chang, Anal. Chem. 75, 1805 (2003). 2. I.S. Gilmore and M.P. Seah, Int. J. Mass Spectrom. 202, 217 (2000). 3. T. Nohmi and J.B. Fenn, J. Am. Chem. Soc. 114, 3241 (1992). 4. X. Cheng, R. Bakhtiar, S. Van Orden and R.D. Smith, Anal. Chem. 66, 2084 (1994). 5. Y. Cai, W.P. Peng, S.J. Kuo, C.C. Han, and H.C. Chang, Anal. Chem. 74, 4434 (2002) 6. D.C. Shriemer and L. Li, Anal. Chem. 68, 2721 (1996).