Medical Microbiology & Immunology Lecture 24 Virology Retroviruses (HTLVs, HIVs, and AIDS Molecular) 1) To understand the term retroviruses. Retroviruses are enveloped, single stranded (+), RNA viruses, which contain an enzyme known as reverse transcriptase, which converts the RNA genome to DNA genome after infecting the host cells. The virus DNA integrates into the host genome. Transmissible only by intimate contact. 2) To recognize the difference between oncoviruses and lentiviruses. Oncoviruses transform cells to produce new virus indefinitely and can transduce growth promoting genes called oncogenes, which are partly responsible for malignancies. Human T-limpotrophic virus type1 (HTLV-I) and type 2 (HTLV-II) are oncogenes that infect T-lymphocytes. Lentiviruses are slow disease causing viruses including: HIV-1 and HIV-2, the viruses that cause AIDS, which infect and specifically kill T4 lymphocytes. They also infect monocytes-macrophages, dendritic cells, Langerhans cells, brain cells, etc. 3) To describe the structure and replication of retroviruses. Structure: Retroviruses are remarkably similar with a virion size of about 100 nm, two copies of (+) RNA genomes (diploid) coated with nucleocapsid proteins and RNA protein complex enclosed in capsid protein, matrix covers the capsid, and nuclear-derived membrane with surface and transmembrane glycoproteins. Replication: viral entry - HIV-1 virions interact with the cellular membrane through surface glycoprotein gp120 and CD4+ on T lymphocytes or macrophages, the transmembrane glycoprotein gp41 aids membrane fusion, CXCR4 and CCR5 are coreceptors required for entry (interact with gp120) → Uncoating → Reverse transcription RNA converted to dsDNA (forms pre-integration complex) → Migration to the nucleus → Integration into host genome → Transcription of viral genes by host RNA polymerase II, including envelope glycoproteins and viral regulatory proteins → Translation and processed by viral encoded protease → Viral assembly and release by budding through the plasma membrane. 4) To explain the mechanisms by which retroviruses transform to an oncogenic state. Three mechanisms are known to exist: 1. The acute transforming viruses acquire the cellular gene (oncogene) that results in loss of normal growth control upon expression. Cannot be cytocidal. No known human correlates. 2. Insertional mutagenesis occurs when integration of a retrovirus causes inappropriate expression of cellular genes resulting in uncontrolled growth. The cellular oncogenes are called protooncogenes. No known human correlates. 3. HTLV-I, the causative agent of adult T cell leukemia, integrates a provirus in leukemia cells at a unique location resulting in the continual expression of the viral Tax gene that activates viral transcription and expression of cellular genes (possibly protooncogenes) resulting in malignant transformation 5) To explain the genomic complexity of retroviruses (HTLV-I, HTLV-II, and HIV). HTLV-I HTLV-II Structural genes gag-pol-env are flanked by long terminal repeats (LTR), which act as a promoter, also encodes regulatory genes Tax and Rex HIV Also has gag-pol-env flanked by LTRs, but encodes regulatory proteins Tat and Rev, and accessory proteins Vif, Vpr, Vpu, and Nef. HIV-2 encodes all accept Vpu, it encodes Vpx instead. 6) To understand the roles of viral structure and regulatory proteins. Proteins gag pol env tat rev nef vif vpr vpu (HIV-1) vpx (HIV-2) Function The group specific antigen gene encodes structural proteins and in some cases the protease. The polymerase gene encodes reverse transcriptase, integrates, and protease in some cases. The envelope gene encodes the two glycoproteins found in the envelope, gp120 and gp41 by processing gp160. Exhibits extensive variation resulting in considerable polymorphism. Transcriptional post-transcriptional activator. Post-transcriptional activator, transport structural proteins RNAs to the cytoplasm, involving RNA splicing and stability. Negative factor, down regulates CD4+ expression, required for viral pathogenesis. Infectivity Up regulates virus expression, prevents cell proliferation, arrest cells in G2/Mphase Virus release and/or assembly Virus assembly (?) 7) To know the complex interaction of HIV and immune system and the role of host factors in HIV infection. Immune system interaction: destroys CD4+ cells reducing the CD4+/CD8+ ratio from 2.0 to 1.0-0.2 in infected patients. Active virus production results in cell death. CD4+ cells expressing gp120 and gp41 on their membrane can be killed by antibodyplus-complement lysis. MHC I expression with viral peptides can be killed by CTL response. Number of infected T cells = 0.0 1-1%. Lymph nodes contained 10-100 times more virus than circulating T cells. Uninfected CD4+ T cells can be depleted by syncytial formation, destruction is mediated by soluble gp120 which interferes with T cell maturation resulting in apoptosis. Humoral and cell mediated immune response: neutralizing antibodies primarily target gp120 and gp41, but antibodies against most HIV-1 proteins can be found in infected patients. CD4+ T cells present viral peptides on MHC II causing the release of antiviral cytokines (INF-g, TNF). CD8+ T cells present viral peptides on MHC I resulting in killing of virus-infected cells and release of antiviral substances. Cell-tocell spread avoids virus recognition by antibodies. The immune system is unable to keep pace with the rapidly mutating virus. T cell and B cell function is impaired, suppressing MHC I and II and interfering with cytokine function. 8) To discuss genetic variation in HIV. HIV-1 possesses the most error-prone reverse transcriptase resulting in a myriad of variants. The variability is mainly in the envelope region of the genome but also observed in other regions, and is stimulated by immunologic pressure for change, alteration in cell tropism, and replication efficiency. This genetic variation causes problems in vaccine development. 9) To describe pathogenesis and immunopathologies of HIV-I infection. Pathogenesis: complex and poorly understood. HIV-1 targets CD4+ surface marker on key lymphocytes, monocytes, and macrophages (probably the first to be infected). R5 HIV-1 is commonly transmitted from person to person or mother to child. Buyers can also infect other tissues expressing CD4 including: enterocytes, renal epithelium, and brain astrocytes. Latency: there is no viral latency in HIV-1 infection. Clinical latency observed in HIV-1 infection is a long symptomatic symptomatic asymptomatic period following infection. Factors that terminate clinical latency include mutations, altered cell tropism, activation of infected T cells by mitogens and DNA viruses. Immunopathology: production of CD4+ T lymphocytes due to direct killing of the target cells. Leads to generalized failure of cell mediated immune responses resulting in opportunistic infection and malignancy.