Biology Chapter 3 Notes: Cells Cells all organisms made of cells; most basic unit of life first used in mid-1600s by Robert Hooke (British scientist); small rooms Cell theory: all living organisms are made up of one or more cells; cells arise from other, preexisting cells Prokaryotic Cells Does not have a nucleus; DNA simply resides in the middle of the cell Four basic structures: plasma membrane encompasses the cell (intracellular substances are within the cell); cytoplasm's jelly-like substance fills the cell; ribosomes makes proteins; one or more circular loops or linear strands of DNA may have cell walls to protect and give shape to the cell pili: Hair-like projections that help cells attach to other surfaces Flagellum: whip-like projection(s) that aids in cellular movement diverse metabolically Endosymbiosis Theory a prokaryote entered a larger host prokaryote, eventually their existence became dependant on each other Support: chloroplasts and mitochondria are similar in size to prokaryotic cells; have small amounts of circular DNA simular to prokaryotes; divide by fission like prokaryotes; have internal structures called ribosomes that are similar to bacteria ones Invagination plasma membrane folds in on itself; other compartments are formed when new membrane encloses on the folded ones Eukaryotic Cells about 1.5 billion years after prokaryotes Typical features: DNA contained in nucleus; internal structures into compartments; larger usually by 10 times; cytoplasm has organelles Plasma Membrane phospholipid bilayer (phospholipids) membrane that holds the contents of a cell in place and regulates what enters and exits the cell Heads of the phospholipids re hydrophilic (polar) and the tails are hydrophobic (non-polar); a sheet is created various protein, carb and lipid molecules are also attached to the bilayer Transmembrane proteins: penetrate right through the lipid bilayer; surface proteins reside on the inner or outer surface of the membrane; lipids are within the hydrophobic tails Receptor proteins: bind to chemicals in the cell's external environment; regulate certain processes within the cell; heart cell receptors bind to adrenaline in times of stress or fright Recognition Proteins: a fingerprint that makes it possible for the body's immune system to distinguish the cells that belong inside your body from those that are invaders and need to be attacked; help cells bind to or adhere to other cells/molecules Transport proteins: transmembrane proteins that help large/strongly charged molecules pass through the plasma membrane Enzymatic proteins (enzymes): accelerate chemical reactions on the plasma membrane's surface Short Branched Carbohydrate Chains: allows cell to be recognized by other cells like immune sys Cholesterol: helps membrane maintain its flexibility Fluid mosaic: plasma membrane comprised of many parts that aren't anchored in place Faulty membranes: cystic fibrosis (chloride ions are restricted and hard to get mucus out of lungs) Beta-blockers: treats anxiety Have a fingerprint that identifies cells ("I belong here") Movement of molecules across membranes Passive transport: molecular movement occurs spontaneously without input of energy; diffusion and osmosis Diffusion: solute is dissolved in a gas or liquid (solvent) and moves from an area of high solute concentration to an area of a lower concentration; moves down their concentration gradient Simple diffusion: gets through plasma membranes on their own (O2, CO2) Facilitative diffusion: Most molecules may be repelled and electrically charged; they need a carrier molecule to pass/enter Osmosis: passive diffusion of water across a membrane; water molecules will move to lower concentration areas; hypertonic solution contains more solutes in extracellular fluid (water diffuses out); hypotonic solutes contain lower concentrations are lower in extracellular fluid (water diffuses in); Isotonic (balanced); only determined by the total concentration of molecules Active Transport: movement of very large molecules or molecules that move against their concentration gradient; uses up energy and ATP; digestion pushes H+ ions into stomach; when the transport uses energy directly from ATP to fuel, it is primary active transport; many transporter proteins use indirect method of fueling activities from ATP and it is called secondary active transport Endocytosis and exoctytosis are used for bulk transport of particles: can be receptor mediated (LDL particles in cholesterol) Phagocytosis: large particles are engulfed by cells / Pinocytosis: dissolves particles and liquids (amoebas, unicellular protists) Connections between cells connections hold the cells in place and enable them to communicate with each other Tight junctions: water-tight seals around cells and also anchor cells in place; important in the small intestine because it prevents excess water and bacteria to flow into your cells along with nutrients Desmosomes: fasten cells together into strong sheets like a irregular interval of velcro (not water tight); lines tissue of animal body cavities, muscle tissue, holding fibers together; lack of this will form blisters Gap junctions: pores surrounded by special proteins that form open channels between two cells; secret passageways for nutrients to flow through; cell-to-cell communication; important for the functioning of hearts; allows cells to recognize when they bump against other cells (contact inhibition); cancer cells do not have contact inhibition In plant cells, there are 1,000-100,000 microscopic gap junctions called plasmodesmata Nucleus the nucleus is the largest and most prominent organelle in most eukaryotic cells; generally larger than any prokaryotic cell Nuclear membrane (nuclear envelope): separates nucleus from cytoplasm; contains two bilayers one on top of the other; perforated and covered with tiny pores made from multiple protein embedded in the phospholipid membranes and spanning both bilayers; pores enable large molecules to pass in and out the nucleus Chromatin: prominent structure inside the nucleus; a mass of long, thin fibers consisting of DNA with some proteins attached to it to keep it from getting impossibly tangled; as DNA directs activity, chromatin resembles a plate of spaghetti but when cell division time, chromatin coils up and the threads become shorter and thicker until they become visible as chromosomes Nucleolus: area near the centre of the nucleus where subunits of the ribosomes are assembled; ribosomes copy bits of info stored in DNA and use them to construct proteins; ribosomes are passed through the nuclear pores and into the cytoplasm before they begin production Cytoplasm and the Cytoskeleton form the cell's internal environment (shape/structure) provide its physical support controls intracellular traffic flow can generate movement with cilia in unison or flagella Mitochondria power all the reactions in our bodies that make it possible for us to breathe, move and think; allpurpose energy converters and are present in virtually all eukaryotic cells; some cells have 200 mitochondria mitochondria consume most of the oxygen used by each cell due to energy conversion from food; produces about 90% of energy our cells need in return Two separate compartments: intermembrane space and the matrix has their own DNA; mixed in among approx 3000 proteins; has 2-10 copies of its own little ringshaped DNA; this DNA carries instructions for making 13 important mitochondrial proteins necessary for metabolism and energy production our mitochondria come from the mitochondria that were initially present in the mother's egg; sperm contains DNA but no cytoplasm so no mitochondria; true for most eukaryotes exercise intolerance can be related to defective mitochondrial DNA Lysosomes round, membrane-enclosed, acid-filled vesicles that function as garbage disposals; enzymes in lysosomes represent broad spectrum of chemicals designed for dismantling macromolecules that are no longer needed by cells or by-products of cellular metabolism 50 different enzymes: some enzymes break down lipids, carbs, protein and nucleic acids lysosomes are frequently also a first step when a cell consumes and begins digesting a particle of food or invading bacterium (phagocytosis) Tay-Sachs disease: inability to produce a critical lipid-digesting enzyme; lysosome swells until it bursts and the cell chokes to death Endoplasmic Reticulum site where cells build proteins and disarms toxins; actual production and modification of biological molecules are made in the endomembrane system with instructions from the nucleus takes up nearly 1/5th of the cell's volume; lipids are produced, products for export are modified, toxic chemicals are broken down and nutralized Rough ER: contains ribosomes for protein production; primary function is to fold and package proteins that will be shipped elsewhere in the organism; proteins used within the cell itself are generally produced on free-floating ribosomes in cytoplasm; pancake stack shaped Smooth ER: father from the nucleus, lacks ribosomes, slightly different in apperance; branched tube look-a-like; synthesizes lipids (varies) such as fatty acids, phospholipids, steroids; hormones are produced inside ovaries and testes; inside liver, fat cells are produced; following production, the cells are transported Smooth ER" detoxifying enzymes break down harmful chemicals; proliferated ER can be beneficial with drugs because it increases capacity for detoxification; may be more and more drug tolerant over time Golgi Apparatus processes molecules sythesized in the cell (primarily proteins and lipids); site of carb synthesis including complex polysaccharides found in many plasma membranes; not interconnected ER transports vesicles into cytoplasm, then to G.A.; vesicles fuse with the G.A. membrane and dump their contents into a Golgi body; contents visit 4 chambers making slight modifications; modified molecules moves into cytoplasm Cell Wall made from polysaccharides imbedded with cellulose; some bacteria, protists, and fungi have cell wall; sometimes there is a secondary cell wall formed; nearly 100 times thicker than plasma membrane provides structural strength; water resistance; protection from insects and other animals primary cell walls touch; plasmodesma connects these cell walls together 50 different enzymes 50 different enzymes Vacuoles Nutrient storage: stores hundreds of dissolved substances including amino acids, sugars, and ions Waste management: retains waste products and degrades them with digestive enzymes like lysosomes Predator deterrence: nasty-tasting materials that accumulate inside Sexual reproduction: contain pigments that give some flowers their colours, enabling them to attract birds/insects to help the plant reproduce by transferring pollen Physical Support: high concentration of solutes cause water to rush into cells through osmosis; creates turgor pressure Chloroplasts power-house for plant cells; contains stroma, thylakoid and DNA each cell in a green leaf has about 40-50 chloroplasts chloroplasts are oval; critical for photosynthesis