Protein Synthesis Activity Preparation • Designate a section of the classroom as the ‘nucleus’. • Designate other sections of the classroom as ‘ribosomes’. • Print out (font size 24) the sample strips (see top right) of DNA sequences of bases (one for each pair of students in the class). Place each strip in an envelope in the area that you have decided will be the nucleus of the cell (by printing each sample twice you will have sufficient for 14 groups). • Print the tRNA codes onto coloured cards (see table below) and print the corresponding word on the back of each card, 8 words per A4 sheet works well. Place these cards at random around the room to show that the tRNA can be found anywhere in the cell. • Print a copy of the worksheet for each student. • Divide class group into pairs of students. If the exercise has been completed correctly each group will have made a sentence. If the sentence does not make sense a mistake has been made and each of the mRNA and tRNA sequences has to be rechecked. 1 1.ATGAAAAACAAGGTACACATCTAG 2.ATGAAAACAATTTGCACGTAG 3.ATGTAAACCACTAGATAG 4.ATGAGAAACAGGGGACACATATAG 5.ATGCCCCCGAGAAGCCCTTAG 6.ATGCCCCCGGCAGCCAGATAG 7.ATGAAAGTGATGGATTAG Print this page and cut these seven DNA strands out and put them in an envelope in the space allocated to the nucleus in the classroom. 2 Protein Synthesis Simulation – Student Worksheet 1. Start at the "nucleus". Pick up a DNA strand and write the number of the DNA strand here. 2. Staying in the “nucleus”. Transcribe the DNA into mRNA. Write down the mRNA sequence. 3. Go to one of the “ribosomes” and write the tRNA sequence that corresponds to your mRNA sequence. 4. Split the tRNA sequence into anti-codons. (Groups of three letters) 5. Look for the tRNA cards that match your anti-codons. 6. Write down the words in order. If you have completed this exercise correctly you should have mad a sentence. If you haven’t got a sentence that makes sense then you have made a mistake. Check your mRNA and tRNA sequences Questions 1. Why did you have to stay in the "nucleus" to write down the mRNA? 2. What part of this activity represents transcription? 3. What part of this activity represents translation? 4. What happens in the ribosomes during protein synthesis? 5. What does each word represent in terms of protein synthesis? 6. All DNA sequences started with ATG and ended with TAG? Why? 3 Write down the corresponding mRNA sequence and then write down the corresponding tRNA sequence ( I only give this page out when teaching weaker students) 1. ATGAAAAACAAGGTACACATCTAG __________________________________ __________________________________ 2. ATGAAAACAATTTGCACGTAG __________________________________ __________________________________ 3. ATGTAAACCACTAGATAG __________________________________ __________________________________ 4. ATGAGAAACAGGGGACACATATAG __________________________________ __________________________________ 5. ATGCCCCCGAGAAGCCCTTAG __________________________________ __________________________________ 6. ATGCCCCCGGCAGCCAGATAG __________________________________ __________________________________ 7. ATGAAAGTGATGGATTAG __________________________________ __________________________________ 4 Replication sequences – these are what the student should come up with mRNA tRNA ATGAAAAACAAGGTACACATCTAG UACUUUUUGUUCCAUGUGUAGAUC AUGAAAAACAAGGUACACAUCUAG ATGAAAACAATTTGCACGTAG UACUUUUGUUAAACGUGCAUC AUGAAAACAAUUUGCACGUAG ATGTAAACCACTAGATAG UACAUUUGGUGAUCUAUC AUGUAAACCACUAGAUAG ATGAGAAACAGGGGACACATATAG UACUCUUUGUCCCCUGUGUAUAUC AUGAGAAACAGGGGACACAUAUAG ATGCCCCCGAGAAGCCCTTAG UACGGGGGCUCUUCGGGAAUC AUGCCCCCGAGAAGCCCUUAG ATGCCCCCGGCAGCCAGATAG UACGGGGGCCGUCGGUCUAUC AUGCCCCCGGCAGCCAGAUAG ATGAAAGTGGCGTAG UACUUUCACGCGAUC AUGAAAGUGGCGUAG 5 Codes and Words – print these out on cards AAA AAC AAG ACA ACC ACG ACU AGA AGC AGG AGU AUA AUC AUG AUU CAC CCC CCG CCU CGA CGG GAU GCA GCC GCG GGA GUA GUG UAA UAG UGC Genetics is the makes have individual coding DNA in made a bases inheritance start us of Chromosomes contain Genes Biology Genes traits non coding Inherited up study studies chromosomes Stop an 6 What the sentences should say: 1. 2. 3. 4. 5. 6. 7. Genetics is the study of inheritance Genetics makes us an individual Chromosomes have coding DNA DNA is made up of bases Chromosomes contain DNA and genes Chromosomes contain non coding DNA Genetics studies inherited traits Instructions: 1: Print out a copy of page one and cut into coding strips. Place these sections of code in an envelope at the desk that you have decided will be the nucleus of the cell. If you have more than six groups you can print page one twice or make up more codes. 2: Print the tRNA triplet codes onto cards and print the corresponding word on the back of each card. I placed these cards at random around the room to show that the codes could be found anywhere in the cell. 3: Print a copy of the student worksheet for each student. 7