Structure of Matter

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February 19 th , 1994

DMSO = Dimethyl Sulfoxide

A Change…

The Structure of Matter

• “Nature uses only the largest threads to weave her patterns, so each small piece of her fabric reveals the organization of the entire tapestry”

– -Richard Feynman

What’s The Difference?

• BIOLOGY

• Study of the structure, organization and interaction of living organisms

• CHEMISTRY

• Study of the structure, organization and interaction of matter

Properties of Matter

• Chemical • Intensive

• Physical • Extensive

CHEMICAL v. PHYSICAL

• CHEMICAL • PHYSICAL

• A property of matter than exists only when the matter interacts with other forms of matter

• A property of matter that exists whether or not the matter interacts with other forms of matter

• Ex: Oxidation

(rusting)

• Ex: Density, Viscosity

INTENSIVE v. EXTENSIVE

• Intensive • Extensive

• Property or characteristic is consistent regardless of the amount of matter present

• Property or characteristic depends upon the amount of matter

• Ex: mass, pH

• Ex: boiling point, conductivity

These properties are determined by the arrangement of matter on multiple levels

The Atom

• Atmos = indivisible

• Three major subatomic particles

– Proton

– Neutron

– Electron

Elements of Biological Interest

• Oxygen (O)

• Carbon (C)

• Hydrogen (H)

• Nitrogen (N)

• Calcium (Ca)

• Phosphorus (P)

• Potassium (K)

• Sulfur (S)

• Sodium (Na)

• Chlorine (Cl)

• Magnesium (Mg)

Electron Arrangement

• Energy levels/orbits

• Shells hold

– 2 e-

– 8 e-

– 18 e-

• Valence Electrons are outermost electrons

The Octet Rule

• Atoms seek stability through having completely full or completely empty valence shells

• Atoms may gain, lose or share electrons to satisfy these full or empty arrangements. These arrangements are called BONDS

• The interaction of electrons occurs in the valence (outermost) shells/orbits

IONS

• Atoms with an imbalance between the number of electrons (-) and protons (+)

• If protons > electrons, the positively charge atom is a CATION

• If protons < electrons the negatively charged atom is an ANION

WHAT’S THE DIFFERENCE?

• IONIC

• Gain or loss of electrons from valence shells

• Causes an imbalance in electrical charge • Considerably stronger than ionic bonds

• As a result of this exchange, ions are formed.

• COVALENT

• Sharing of electrons in valence shells to satisfy octet rule for all atoms involved

Intermolecular Forces

• Attractions between positive and negative groups in molecules

• Electrons are not shared or exchanged

• Weak, temporary forces

• Examples:

– Hydrogen

– Van der Waal

– Disulfide

– Metallic

WHAT’S THE DIFFERENCE?

• COMPOUND • MOLECULE

• Def: Matter comprised of two ore more different elements

• Ex: NaCl, H

2

0, CCl

4

• Def: Smallest unit of a chemical substance that retains properties of that same substance

• Ex: C

6

H

12

O

6

, Cl

2,

H

2

O

What’s The Difference?

• ORGANIC • INORGANIC

• Contains carbon • Does not contain carbon

• Ex: C0

2

, CCl

4

, C

6

H

12

O

6

• H

2

O, NaCl, H

2

SO

4

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