Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Course Title and Number: Biology 2164 – Microbiology Day(s) and Time(s): Lecture- MC G27 5:30-6:50 MW Lab – MC 629 7:00-9:50 pm M Instructor: Prof Judyth Gulden Office hours: by appointment TO CONTACT YOUR INSTRUCTOR Phone: 918 289 0744 Email: judyth.gulden@tulsacc.edu PREREQUISITES FOR THIS COURSE BIO 1224 and CHEM 1215 or CHEM 1114 TO CONTACT THE DIVISION OFFICE Division Name: Metro Science & Mathematics Division Associate Dean: Dr. Connie Hebert Office: MC 620 Phone: 918 595 7334 COURSE DESCRIPTION General microbiology with emphasis on fundamentals of morphology, physiology, and growth related activities of pathogenic and nonpathogenic disease producing organisms. Principles involved in susceptibility and resistance to infections and the uses of immune sera and vaccines. Lecture: 3 hours. Laboratory: 3 hours. COURSE PURPOSE I. Learning Objectives II. Describe the structure, reproduction, metabolism and disease processes of the major groups of bacteria and viruses. Describe the major groups of bacteria from their microscopic, cultural, and diagnostic standpoints. Explain host-microbe interactions including normal flora, transients and pathogens. Outline the nonspecific and specific host defense mechanisms and the roles of various cells and chemicals involved. Describe the nutritional requirements of microbes and the consequent relationships to the disease process. Describe the diseases, transmissions, epidemiology, culturing and biochemical characteristics of select genera and species of bacteria. Perform the laboratory skills of general microbiology, including microscopy, staining, aseptic technique, transfer, culturing and the use of diagnostic media. Relate current trends in microbiology, from analysis of current research in recombinant DNA to gene therapy, DNA sequencing, and monoclonal antibodies. Demonstrate aseptic technique as it relates to personal life, laboratory procedures, and the medical setting. Explain microbial growth processes, their requirements for growth, the mathematics of microbial growth, and the control of microbial growth in the laboratory, medical, and personal setting. Student Learning Outcomes The following are specific learning outcomes for the student taking this class: 1 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Describe and practice laboratory safety guidelines relating to working with chemicals, microorganisms, body fluids and/or dissection. Define and correctly use scientific terminology in regard to microbiological organisms and processes. Synthesize information, think critically and solve critical thinking problems; write clear, well organized answers to assignments that demonstrate synthesis. Work well independently and show self-direction and motivation Understand and follow directions properly Show proficiency in taking exams, by responding to questions quickly and accurately, effectively handling the pressure of a timed exam. Assess personal needs in regard to study time and methods, and accept personal responsibility for the learning process. Apply principles of scientific inquiry, differentiate a theory from a hypothesis, and differentiate fact from opinion in regard to microbiological sciences. Assess and describe aspects of sustainability, including economic, societal and environmental factors, especially in relation to microbiological systems. TEXTBOOKS AND MATERIALS All materials can be purchased at the bookstore. Required Books and Materials Microbiology with Diseases by Body System 4e – Bauman, Benjamin Cummings Microbiology Laboratory Theory and Applications – Leboffe & Pierce, 9780895829672 (Custom Edition) – Please note that if you buy other editions you will be responsible for getting the questions and other materials found in the custom edition. Students must have safety glasses that wrap around the eye and a lab coats for all labs. Students who do wear goggles and/or lab coats during labs will not be allowed to participate in the lab. Student must have a box of microscope slides, a lab notebook, and a black Sharpie permanent marker. Safety policy: Students must wear safety glasses and protective gloves during labs. Students not wearing proper safety equipment will not be allowed to participate in the designated laboratory exercise. Students who consistently engage in unsafe practices in the lab may be asked to leave by the Instructor. INSTRUCTOR SUPPORT Prof Gulden is available by phone, text, email or you can schedule an appointment. You are encouraged to call the Instructor to discuss the material or any other items concerning the course. Email will be checked daily, Monday through Friday from 9 am to 6 pm CST. 2 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Please note that if you send an email after those hours, it may not be addressed until the following business day (Monday-Friday). This includes requests concerning exams or online assignments. When you email please put your name, course and section number in the subject line of the email. This helps the instructor identify emails that need immediate attention. For example: Guldenbio1224section21032098 ATTENDANCE POLICY AND LATE ARRIVALS The likelihood of succeeding in this course without your attendance is minimal. If you exceed more than 2 unplanned absences from classes without contacting the instructor prior to the scheduled class you may be dropped from the class at the instructor’s discretion. For late arrivals see Inappropriate Behavior in the Classroom below. TEACHING METHODS Lecture, videos, interactive and lab exercises, seminars, research activities, fieldtrips, and occasional guest speakers. The course material will be divided into units representing closely related topics. Lecture will introduce the major concepts. Each student is responsible for learning all assigned materials regardless of whether they are presented through lecture or laboratory exercises. Once each week students will participate in a Hands-On experience in the laboratory. Prior to any class meeting, it is each student's responsibility to have read the appropriate assigned material. EVALUATION TECHNIQUES Letter grades will be determined on the basis of the following: Grading Scale 90-100% 80-89% A B 70-79% 60-69% C D Assignment Categories Exams [4@100 pts each] Lecture Final Exam [100 - comprehensive] & Lab Final Exam [60 comprehensive] Unknown Lab Report [100pts] Lab Assignments [13@15 pts] Lecture Quizzes [4@10] Lab Quizzes [3 @ 10] Infectious Disease Paper [50] & Presentation[25] Total Points 400 pts 160 pts 100 pts 195 pts 40 pts 30 pts 75 pts 1000 pts Exams and assignments will not be returned to students. A student may make an appointment to look over their exams/assignment at any time before finals weeks. You may also make copies of your assignments prior to turning them in. 3 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Make up policy: Lecture exams and quizzes may not be made up. In the event that an exam or quiz is missed, the score on the next exam or quiz will be doubled and substituted for the missed exam or quiz. Only one exam or quiz (excluding the final exam which must be taken) may be made up during the semester. The student must inform the instructor BEFORE the date of the exam if they are going to miss it. This may be done by email or phone. If this is not done prior to the date of the exam or quiz then the student will receive a zero and may not take advantage of the makeup policy. Assignment Presentation: All assignments are to be typed or in a format specified by the instructor. There are computers with word processing software available to any TCC student with a current ID. These are located in the General User Microcomputer Lab on all campuses. All graphs must be generated using graphing software (e.g. excel). All work must be in a format that is supported by Microsoft Office unless directed otherwise by the instructor. The IT helpdesk and Computer Lab Services are available to provide support to students and help them with technology related questions. Late Laboratory and Short Assignments: Due dates are provided for all assignments. Late assignments will only be accepted up until the following class period. At that time, the assignment will lose 50% of the score. You may turn in assignments early. OTHER POLICIES AND REQUIREMENTS Announcements pertaining to course activities will be made at the beginning of lecture and posted on Blackboard. The student is responsible for obtaining all information made available during the meeting periods from other students if they do not attend. All handouts, when possible, will be posted on Blackboard. It is your responsibility to acquire them. Laboratory exercises, class presentations and fieldtrips cannot be made up. Last day to withdraw: Make sure you note the date. It is the student’s responsibility to make sure they withdraw. AW will not be given in lieu of forgetting to withdraw in time. Cellular Phones and Pagers Turn them off during lecture and laboratory! If for some reason you expect an emergency situation to arise, please turn off the ringer and take the call outside of class. Please be respectful of other students. Cell phones MUST NOT ring or be answered during laboratories or exams! Internet Accessibility: All TCC students have access to computers and the Internet in the General User Computer Labs on all four campuses. Public libraries are an additional location. Inappropriate Behavior in the Classroom – Increasingly many students display inconsiderate behavior towards the instructor and other students. This will not be tolerated. Initially the instructor will speak to the student individually. If a change in behavior is not observed, the student will be dropped from the class. Such behavior includes disruptive late arrivals (repeated arrivals more than 7 minutes after a session begins without prior notification is considered disruptive), excessive talking during lecture, repeated 4 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus leaving and returning to the room during lecture, repeated cell phone interruptions, and rudeness towards the instructor. Changes in this Syllabus The policies and statements contained in this syllabus may be altered, added to, or deleted at any time by the instructor of the class. This will be done by typed supplements or amendments given to the student and/or posted on blackboard. Course Withdrawal: The deadline to withdraw from a course shall not exceed 3/4 the duration of any class. Contact the Counseling Office at any TCC campus to initiate withdrawal from a course ('W' grade) or to change from Credit to Audit. Check the TCC Academic Calendar for deadlines. Students who stop participating in the course and fail to withdraw may receive a course grade of “F,” which may have financial aid consequences for the student. Communications: a. Email communications: All TCC students receive a designated “MyTCC” email address (ex: jane.doe@mail.tulsacc.edu). All communications to you about TCC and course assignments will be sent to your MyTCC email address; and you must use MyTCC email to send email to, and receive email from, the instructor regarding this course. b. Inclement Weather: TCC rarely closes. If extreme weather conditions or emergency situations arise, TCC always gives cancellation notices to radio and television stations. This information is also posted on the TCC website (www.tulsacc.edu). General Education Goals: General Education courses at TCC ensure that our graduates gain skills, knowledge, and abilities that comprise a common foundation for their higher education and a backdrop for their work and personal lives. TCC’s General Education goals are: Critical Thinking, Effective Communication, Engaged Learning, and Technological Proficiency. Classroom Etiquette: Open and mutually respectful communication of varied opinions, beliefs, and perspectives during classroom or online discussion encourages the free exchange of ideas that is essential to higher learning and to the ability to learn from each other. Use of any electronic device (including computers, ipads and smartphones) is at the discretion of the instructor. Academic Dishonesty: Academic dishonesty (cheating) is defined as the deception of others about one’s own work or about the work of another. Academic dishonesty or misconduct is not condoned or tolerated at campuses within the Tulsa Community College system. Tulsa Community College adopts a policy delegating certain forms of authority for disciplinary action to the faculty. Such disciplinary actions delegated to the faculty include, but are not limited to, the dismissal of disrespectful or disorderly students from classes. In the case of academic dishonesty a faculty member may: o require the student to redo an assignment or test, or require the student to complete a substitute assignment or test; o Record a "zero" for the assignment or test in question; o Recommend to the student that the student withdraw from the class, or administratively withdraw the student from the class; o Record a grade of "F" for the student at the end of the semester. Faculty may request that disciplinary action be taken against a student at the administrative level by submitting such request to the Dean of Student Services. 5 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus It is the student’s responsibility to ensure that they understand the meaning of plagiarism, how to avoid it and the consequences of any acts of plagiarism. Not understanding how to properly cite materials or use citation format does not provide an excuse for academic dishonesty. DISABILITY RESOURCES It is the policy and practice of Tulsa Community College to create inclusive learning environments. Accommodations for qualifying students in compliance with the Americans with Disabilities Act (ADA) and Section 504 of the Rehabilitation Act are available. To request accommodations, contact the Education Access Center (EAC) at eac@tulsacc.edu or call (918) 595-7115 (Voice). Deaf and hard of hearing students may text (918) 809-1864. Blackboard is an accessible learning management system. Blackboard’s accessibility information can be found at http://www.blackboard.com/Platforms/Learn/Resources/Accessibility.aspx . Institutional Statement Each student is responsible for being aware of the information contained in the TCC Catalog, the TCC Student Policies & Resources Handbook, and semester information listed in the class schedule. All information may be viewed on the TCC website: www.tulsacc.edu 6 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus FALL 2014 SCHEDULE OF READINGS AND ASSIGNMENTS Week of Lecture & Exams Aug 18 First day of class Aug 25 Sept 1 Sept 8 Sept 15 Sept 22 Sept 29 Oct 6 Laboratory & Assignments ADDITIONAL READINGS, QUIZ Intro & Ubiquity Lab safety & introduction Basic Lab techniques Ubiquity (2.1) Aseptic Transfer (1.3) Microscopy Microscopy (3.1) All items, including labs must be submitted by Sept 1 at 5:30pm CST Stains & Smears Simple Stain (3.4) Gram Stain (3.6) Acid Fast (3.7) Capsule Stain (HO; 3.8) Endospore Stain (3.9) All items, including labs must be submitted by date Sept 8 at 5:30 pm CST Exam 1 – Chpt 4-6 (M) Chp 7 – Microbial Genetics Aerotolerance Fluid Thioglycollate (2.6) Anaerobic Jar (2.7) Nitrate Reduction Test (5.6) Quiz 2 Chpts 7,8, & 13 (due Oct 29 at 5:30 pm CST) All items including labs must be submitted by Sept 15 at 5:30 pm CST Chp 8 – Recombinant DNA Technology Chp 13 - Viruses Quiz & Unknown Lab Quiz 1 (W) Stain Unknown All items, including labs must be submitted by Sept 22 at 5:30pm CST Review for exam 2 (M) Exam 2 – Chpt 7,8,&13 (W) Chp 15 – Innate Immunity Stain Unknown All items, including labs must be submitted by Sept 29 at 5:30pm CST Selective and Differential Media Mannitol Salt (4.1) EMB (4.4) Hektoen (4.5) Unknown Quiz 3 Chpt 15-18 (due Oct 27 at 5:30 pm CST) All items, including labs must be submitted by Oct 6 at 5:30pm CST Carbohydrates and Fermentation Phenol Red Broth (5.2) Syllabus Chp 4 – Microscopy , Staining and Classification Chp 5 - Microbial Metabolism Chp 6 – Microbial Nutrition & Growth Labor Day (M) no class Review for exam 1 Chp 16 – Adaptive Immunity Quiz 1 Chpts 4-6 (due Sept 8th at 5:30 pm CST) All items, including labs must be submitted by Aug 25 at 5:30pm CST All items, including labs must be submitted by Oct 13 at 5:30pm CST 7 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Week of Lecture & Exams Oct 13 Chp 17 – Immunization and Immune Testing Oct 20 Chp 18 – AIDS and Immune Disorders Oct 27 Review for exam 3 Exam 3 – Chpt 15,16,17, 18 (W) Nov 3 Nov 10 Nov 17 Nov 24 Chp 9 – Controlling Microbial Growth Environment Chp 10 – Controlling Microbial Growth Body Chp 14 – Infection, Infectious Disease and Epidemiology Review for exam 4 Exam 4 – Chpt 9,10,14 (W) Review for Final Exam Laboratory & Assignments MR-VP (5.3) Unknown Quiz & Respiration &Combination Differential Lab Quiz 2 (W) Lysine Iron (5.22) Catalase (5.4) Oxidase (5.5) SIM (5.17) Unknown Enzymes Starch (5.11) Gelatinase (5.14) Lipid (5.16) Unknown Antimicrobials and Immunodiffusion Kirby-Bauer (7.2) Blood Typing (8.6) Hand out Unknown Medical Micro Snyder (7.1) UV Light (2.11) Chemical Germicides (2.12) Blood Agar (5.20) Quiz & Epidemiology & Bioterrorism Lab Quiz 3 (W) Epidemic (7.4) Bioterrorism - CDC film History of Bioterrorism Unknown Epidemiology Simulation Game Eukaryotic Pathogens & Presentations Eukaryotic Pathogens (HO) Presentations ADDITIONAL READINGS, QUIZ All items, including labs must be submitted by Oct 20th at 5:30pm CST All items, including labs must be submitted by Oct 27th at 5:30pm CST Quiz 4 Chpt 9,10,14 (due Nov 17 at 5:30 pm CST) All items including labs must be submitted by Nov 3rd at 5:30 pm CST All items, including labs must be submitted by Nov 10 at 5:30pm CST Papers due Nov 17th at 5:30 pm CST All items, including labs must be submitted by Nov 17 at 5:30pm CST Unknown Report due Nov 24th at 5:30 pm CST All items, including labs must be submitted by Nov 24th at 5:30 pm CST. Thanksgiving Break – no lab 8 Biology 2164 – Microbiology Fall 2014 Tulsa Community College Metro Campus Week of Lecture & Exams Dec 1 Dec 8 Review Final Exam Laboratory & Assignments Lab Final Exam FINALS & SEMESTER ENDS ADDITIONAL READINGS, QUIZ FINAL EXAM – Includes all chapters and laboratory work assigned 9