Recombinant DNA and Genetic Engineering Chapter 16 Familial Hypercholesterolemia Gene encodes protein that serves as cell’s LDL receptor Two normal alleles for the gene keep blood level of LDLs low Two mutated alleles lead to abnormally high cholesterol levels & heart disease Example of Gene Therapy Woman with familial hypercholesterolemia Part of her liver was removed Virus used to insert normal gene for LDL receptor into cultured liver cells Modified liver cells placed back in patient Results of Gene Therapy Modified cells alive in woman’s liver Blood levels of LDLs down 20 percent No evidence of atherosclerosis Cholesterol levels remain high Remains to be seen whether procedure will prolong her life Genetic Changes Humans have been changing the genetics of other species for thousands of years Artificial selection of plants and animals Natural processes also at work Mutation, crossing over Genetic Engineering Genes are isolated, modified, and inserted into an organism Made possible by recombinant technology Cut DNA up and recombine pieces Amplify modified pieces Discovery of Restriction Enzymes Hamilton Smith was studying how Haemophilus influenzae defend themselves from bacteriophage attack Discovered bacteria have an enzyme that chops up viral DNA Specificity of Cuts Restriction enzymes cut DNA at a specific sequence Number of cuts made in DNA will depend on number of times the “target” sequence occurs Making Recombinant DNA 5’ G 3’ C T T A A A A T T C G one DNA fragment another DNA fragment 5’ G A A T T C 3’ 3’ C T T A A 5’ G In-text figure Page 254 Making Recombinant DNA nick 5’ G A A T T C 3’ 3’ C 5’ T T A A G nick DNA ligase action G A A T T C C T T A A G In-text figure Page 254 Using Plasmids Plasmid is small circle of bacterial DNA Foreign DNA can be inserted into plasmid Forms recombinant plasmids Plasmid is a cloning vector Can deliver DNA into another cell Using Plasmids DNA fragments + enzymes recombinant plasmids Figure 16.4 Page 255 host cells containing recombinant plasmids Amplifying DNA Fragments can be inserted into fast-growing microorganisms Polymerase chain reaction (PCR) Polymerase Chain Reaction Sequence to be copied is heated Primers are added and bind to ends of single strands DNA polymerase uses free nucleotides to create complementary strands Doubles number of copies of DNA Polymerase Chain Reaction Double-stranded DNA to copy DNA heated to 90°– 94°C Primers added to base-pair with ends Mixture cooled; base-pairing of primers and ends of DNA strands Stepped Art Figure 16.6 Page 256 DNA polymerases assemble new DNA strands Polymerase Chain Reaction Mixture heated again; makes all DNA fragments unwind Mixture cooled; basepairing between primers and ends of single DNA strands Stepped Art Figure 16.6 Page 256 DNA polymerase action again doubles number of identical DNA fragments DNA Fingerprints Unique array of DNA fragments Inherited from parents in Mendelian fashion Even full siblings can be distinguished from one another by this technique Tandem Repeats Short regions of DNA that differ substantially among people Many sites in genome where tandem repeats occur Each person carries a unique combination of repeat numbers Gel Electrophoresis DNA is placed at one end of a gel A current is applied to the gel DNA molecules are negatively charged and move toward positive end of gel Smaller molecules move faster than larger ones Analyzing DNA Fingerprints DNA is stained or made visible by use of a radioactive probe Pattern of bands is used to: Identify or rule out criminal suspects Identify bodies Determine paternity Genome Sequencing 1995 - Sequence of bacterium Haemophilus influenzae determined Automated DNA sequencing now main method Draft sequence of entire human genome determined in this way Gene Libraries Bacteria that contain different cloned DNA fragments Genomic cDNA library library Engineered Proteins Bacteria can be used to grow medically valuable proteins Insulin, interferon, blood-clotting factors Vaccines Cleaning Up the Environment Microorganisms normally break down organic wastes and cycle materials Some can be engineered to break down pollutants or to take up larger amounts of harmful materials The Ti plasmid Researchers replace tumorcausing genes with beneficial genes Plasmid transfers these genes to cultured plant cells plant cell foreign gene in plasmid Figure 16.11 Page 261 Engineered Plants Cotton plants that display resistance to herbicide Aspen plants that produce less lignin and more cellulose Tobacco plants that produce human proteins Mustard plant cells that produce biodegradable plastic First Engineered Mammals Experimenters used mice with hormone deficiency that leads to dwarfism Fertilized mouse eggs were injected with gene for rat growth hormone Gene was integrated into mouse DNA Engineered mice were 1-1/2 times larger than unmodified littermates Cloning Dolly 1997 - A sheep cloned from an adult cell Nucleus from mammary gland cell was inserted into enucleated egg Embryo Sheep implanted into surrogate mother is genetic replica of animal from which mammary cell was taken Designer Cattle Genetically identical cattle embryos can be grown in culture Embryos can be genetically modified create resistance to mad cow disease engineer cattle to produce human serum albumin for medical use The Human Genome Initiative Goal - Map the entire human genome Initially thought by many to be a waste of resources Process accelerated when Craig Ventner used bits of cDNAs as hooks to find genes Sequencing was completed ahead of schedule in early 2001 Genomics Structural genomics: actual mapping and sequencing of genomes of individuals Comparative genomics: concerned with possible evolutionary relationships of groups of organisms Using Human Genes Even with gene in hand it is difficult to manipulate it to advantage Viruses usually used to insert genes into cultured human cells but procedure has problems Very difficult to get modified genes to work where they should Can Genetically Engineered Bacteria “Escape”? Genetically engineered bacteria are designed so that they cannot survive outside lab Genes are included that will be turned on in outside environment, triggering death Ethical Issues Who decides what should be “corrected” through genetic engineering? Should animals be modified to provide organs for human transplants? Should humans be cloned?