Biology 2250 Principles of Genetics Instructors: Dr. Steven M. Carr Molecular Genetics Dr. David J. Innes Mendelian Genetics Course Web Pages Dr.Innes: www.mun.ca/biology/dinnes/B2250/B2250.html Dr. Carr: www.mun.ca/biology/scarr/Bio2250.html Text Web Page: http://www.whfreeman.com/mga/ Virtual Fly: http://www.biologylabsonline.com/ Tentative Lecture Dates and Topics Carr: Sept. 8 – Oct. 4 Structure and function of Innes: Oct. 13 – Nov. 15 Mendelian Genetics Carr: Nov. 22 – Dec. 1 Molecular Genomics Tests: I Oct. 6 (Thurs) II Nov.17 (Thurs) DNA and genes Weekly Online Quizzes Oct. 14 Oct. 21 Oct. 28 Nov. 4 Nov. 10 Marks Example Quiz 2** for logging in Quiz 1 2 Quiz 2 2 Quiz 3 2 Quiz 4 2 WebCT Quizzes Log in: http://webct.mun.ca:8900/ Webct quizzes Course Goals • • • • Understanding of basic genetics Solve problems Think and think critically Contribute to a discussion on current issues in genetics (GMO, gene therapy…) What is Genetics ? - Genetics is the study of heredity and variation - Examples of genetic variation (within species) 1. Domesticated species 2. Human genetics 3. Natural Populations Genetic variation Phenotypic variation Molecular genetic variation Cultivated varieties Animal Breeds Human Genetic Variation Natural Populations DNA Sequence Molecular Genetic Variation DNA Fingerprint Protein variation Which suspect matches blood stain ? Subareas of Genetics cytogenetics molecular genetics human genetics population genetics quantitative genetics developmental genetics immunogenetics etc. etc. Genetic Journals American Journal of Medical Genetics Clinical Genetics Developmental Genetics Human Molecular Genetics Genetics European J. of Human Genetics Genetics Selection Evolution Nature Genetics Genetika Fungal Genetics and Biology Genome Cancer Genetics and Cytogenetics Genomics American J. Human Genetics Heredity Annals of Human Genetics Hereditas Opthalmic Genetics Japanese Journal of Human Genetics Human Genetics Journal of Heredity Current Genetics Molecular Biology and Evolution Animal Genetics Molecular Ecology Brazilian J. Genetics Molecular and General Genetics Biochemical Genetics Theoretical and Applied Genetics J. of Medical Genetics Trends in Genetics (http://www.trends.com/tig/default.htm) History of Genetics • Domestication of animals • Cultivation of plants Historical Notes 1953 J. D. Watson and F. Crick(*) DNA Structure http://www.sil.si.edu/Exhibitions/Science-and-theArtists-Book/bioc.htm Advances in Genetics • Human Genome Sequence http://www.hgsc.bcm.tmc.edu/ • Drosophila Genome sequence http://flybase.bio.indiana.edu/ • Other organsims: http://daphnia.cgb.indiana.edu/ http://www.jgi.doe.gov/ Genetic Information Online Mendelian Inhertitance in Man (OMIM) http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db =OMIM Online Mendelian Inhertiance in Animals (OMIA) http://omia.angis.org.au/ Ethical Issues in Genetics Ethical Issues in Genetics • Genetically modified organisms (GMO) • Gene therapy (Parkinson’s) http://hdlighthouse.org/research/genetherapy/upd ates/0053parkinson.phtml • Designer genes • Data banks of DNA finger prints (criminals?) • Cloning (Stem cell research) 1997 Cloning 1999 - 2002 1998 Sheep Mice Pig Dolly “An udder way of making lambs” Goat Cow nucleus foster egg “Cc” copy cat Genetics in the News Basic Concepts of Genetics (Chapter 1) contains genetic material genetic material 4 bases (nucleotides G, C, A, T) Gene functional unit of heredity sequence of 4 nucleotides Chromosome linear DNA molecule Nucleus DNA Pairs of Chromosomes (maternal, paternal) Two sets of chromosomes: diploid One set of chromosomes: haploid DNA Replication Gene Expression 2. Translation of mRNA: triplet codon Amino acid 1. Transcription of mRNA from DNA Understanding Genetics Relationship between: GENOTYPE set of genes inherited ENVIRONMENT PHENOTYPE morphology physiology behaviour Interaction of genes and environment Genotype Phenotype Mendelian Genetics Topics: - Transmission of DNA during cell division Mitosis and Meiosis (Ch. 4) - Segregation (Ch. 5) - Sex linkage (Ch. 5) - Inheritance and probability (Ch.5) - Mendelian genetics in humans (pedigrees) (Ch.5) - Independent Assortment (Ch. 6) - Linkage (Ch. 6) - Gene mapping (Ch. 6) Mendelian Genetics Topics (cont.): - Tetrad Analysis (mapping in fungi) - Extensions to Mendelian Genetics - Gene mutation - Chromosome mutation - (Quantitative and population genetics) Basic Concepts of Genetics Cell/nuclear division Mitosis (somatic tissue): identical cells Meiosis (germ tissue): gametes (variation) Mendelian Genetics: Chromosomes Readings: Transmission of DNA and cell division - Mitosis and meiosis (Ch. 4) pp. 92, 100 – 113 Chromosome Theory of Inheritance (Ch. 4) - genes organized into chromosomes - correlation: Genetics & Cytology - theory can explain the behaviour of genes (segregation and independent assortment) Chromosome and DNA Replication 1. DNA replication results in chromosome replication 2. Nuclear and cell division Cell cycle: S = synthesis Mitosis G = “gaps” n = # of chr. in a set Haploid (n) Diploid (2n) n 2n Meiosis 2n n Animal Polar bodies n n egg Plant n gp = gametophyte Fungus Cytological Observations 1. Constancy of the number of chromosomes 2. Morphologically similar pairs (diploid) 3. Gametes - contain one set (haploid) 2n Homologous chromosomes n Two processes of nuclear division 1. Mitosis (somatic tissue) 2. Meiosis (germ tissue) Mitosis 1. one parent cell--------> 2 identical daughter cells 2. same in all organisms 3. simple: (a) each chromosome doubles (identical) (b) identical halves separate Four Stages of Mitosis 1.Prophase 2. Metaphase 3. Anaphase 4. Telophase Chromosome replication 1. Prophase - chromosomes condense - 2 chromatids (sister chromatids) - centromere - nuclear membrane breaks down 2. Metaphase - chromosomes attach to spindle fibers - chromosomes migrate to plane between poles - maximum contraction: karyotype - number Nuclear spindle - centromere position - length 3. Anaphase - centromeres divide - sister chromatids separate 4. Telophase - nuclear membrane reforms - spindle disperses - cytoplasm divides (cytokinesis) Mitosis: Mitosis: Summary 2n = 2 replication mitosis 2n = 4 Mitosis: Summary replication mitosis Mitosis Animation http://www.whfreeman.com/mga/ Mitosis: Lily Fig. 4-21 Meiosis (overview) diploid (2n) ---------------> haploid (n) gametes Chromosome replication once --------> 2 nuclear divisions (meiosis I, II) one nucleus -------------------> 4 nuclei Meiosis I (reductional) Prophase I Metaphase I Anaphase I Telophase I Meiosis II (equational) Prophase II Metaphase II Anaphase II Telophase II Meiosis I (reductional division) 2n = ? Pairing of homologous chromosomes Continued Meiosis II (equational division) 4 products n=? Meiosis Animation http://www.whfreeman.com/mga/ Meiosis: Lily pollen Fig. 4-22 Prophase I Metaphase I Anaphase I Telophase I Prophase II Metaphase II Anaphase II Telophase II Comparison (Fig. 4-24) Mitosis somatic cells one doubling Meiosis cells of sexual cycle one doubling 1 division 2 cells 2 divisions 4 cells same amount of DNA ½ amount of DNA Comparison (continued) Mitosis Meiosis # chrs doesn’t change #chrs. halved No pairing of chr. Synapsis of homologs Centromeres divide at anaphase Conservative Not at anaphase I, but at anaphase II Variation Mitosis (n) Fig. 4-20 Mitosis (2n) Meiosis Genetic Terminology Genes: hereditary elements Alleles: forms of a gene: A , a b, b+ Genotypes Heterozygote: Homozygotes: Gene pairs Aa AA aa bb+ bb b+ b+ Genes on Chromosomes Expect behaviour of genes to correlate with the behaviour of chromosomes: genes chromosomes Diploid (2n) AA, Aa, aa pairs Haploid (n) A a one set Genes on Chromosomes Fig. 4-17 b+ b+ homozygote Genes on Chromosomes b b+ heterozygote b b homozygote Genetic Links http://www.biologyonline.org/tutorials/2_genetics_evolution.htm http://www.tokyo-med.ac.jp/genet/mfi-e.htm http://www.biology.arizona.edu/mendelian_gen etics/mendelian_genetics.html http://science.nhmccd.edu/biol/genetics.html