Hints on Column Chromatography

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13

C NMR: DEPT

• IR Spectroscopy:

- How it works

- Interpretation of spectra

Due:

Lecture Problem 2

Lecture 4

Determine the structure of this unknown (MF is C

8

H

9

Cl)

13 C NMR Correlation Chart

NH

1 H NMR Correlation Chart OH

X-C H

CO

2

H

C H O

12.0

11.0

10.0

9.0

Ar H

C=C H

O-C H

COC H

C H

3

C C H

C H , C H

2

8.0

7.0

6.0

5.0

Chemical Shift,

(ppm)

4.0

3.0

2.0

1.0

0.0

DEPT-NMR

(Distortionless Enhancement by Polarization Transfer)

• Distinguishes between CH, CH

2

, and CH

3 carbons

13

C NMR: broadband decoupled

(normal)

13

C NMR:

DEPT-90

13

C NMR:

DEPT-135

MRI: A Medicinal Application of NMR

Magnetic Resonance Imaging:

• MRI Scanner: large magnet; coils to excite nuclei, modify magnetic field, and receive

Signals

• Different tissues yield different signals

• Signals are separated into components by

Fourier transform analysis

• Each component is a specific site of origin in the patient

 a cross-sectional image of the patient’s body

QuickTime™ and a

TIFF (LZW) decompressor are needed to see this picture.

MRI showing a vertical

Cross section through a

Human head. http://en.wikipedia.org/wiki/Magnetic_resonance_imaging

How it works:

• Most signals originate from hydrogens of

Water molecules

• Water is bound to different organs in different way  variation of signal among organs & variation between healthy and diseased tissue

MRI: A Medicinal Application of NMR

Some Magnetic Resonance Imaging Uses:

• Detailed images of blood vessels

• Examine the vascular tree

• Differentiate intracelluar and extracelluar edema

 stroke patients

• Detecting cancer, inflammation, tumors

Current research:

• 31 P nuclei analysis: investigate celluar metabolism (ATP and ADP)

QuickTime™ and a

TIFF (LZW) decompressor are needed to see this picture.

MRI showing a vertical

Cross section through a

Human head. http://en.wikipedia.org/wiki/Magnetic_resonance_imaging

Spectroscopy

1 H NMR:

Determine bond connectivities/pieces of a structure, whole structure

13C NMR:

Types of carbons (DEPT)

IR:

Determine the functional groups present in a structure:

-OH, C=O, C-O, NH

2

, C=C, C

C, C=N, C

N

IR Spectroscopy

Main Use: To detect the presence or absence of a functional group (specific bonds) in a molecule

How It Works:

1.

Bonds vibrate freely at specific wavelengths (wavenumbers)

2.

Want to cause the bonds to increase the magnitude of this vibrational frequency

3.

Subject compound to IR radiation, 4000-625 cm -1 cm -1 is the unit for wavenumber ( n

) n is directly proportional to energy (unlike wavelength)

4. Bonds absorb energy equal to their natural vibrational energy - it is quantized. This absorption of energy causes a change in dipole moment for the bond.

5. Upon absorption, bonds stretch and/or bend; the IR measures this absorption.

Vibrational Modes of Bonds

Stretches are more noted than bends

Correlation Chart

Specific bonds absorb specific IR radiation and signals will appear within certain wavenumber ranges (similar to NMR).

Note: O-H stretches are broader than N-H stretches

N-H Stretches:

1 ° Amines (RNH

2

) has two peaks

2 ° Amines (RNHR) has one peak

3 ° Amines (NR

3

) has no peaks

IR Correlation Chart

Specific bonds absorb specific IR radiation and signals will appear within certain wavenumber ranges (similar to NMR).

Correlation of Bond St retching and IR A bsorption (See also Correlation Ch art & Table in Lab

Gu ide)

Type of Bond Group

Family of Compounds Wave number Range (cm -1 )

Single Bonds —C— H Alkanes 2850-3300

Alkenes, aromatics 3000-3100 =C— H

 C—H Alkynes 3300-3320

O—H

Alcohols 3200-3600

N—H

Amines 3300-3500

C—O Ethers, E sters, Alcohols

Carboxylic Acids

1330-1000

Double Bonds C=C

Alkenes, aromatics 1600-1680

C=O

Carbonyls 1680-1750

Aldehydes, ketones 1710-1750

Carboxylic acids 1700-1725

Esters, amides

Imines

1680-1750

1500-1650

Triple Bonds

C=N

C

C

C

N

Alkynes

Nitriles

2100-2200

2200-2300

A: O-H stretch (strong, broad)

C: C-H stretch (strong, sharp)

E: C

C or C

N stretch (sharp)

F: C=O stretch (strong, medium to sharp)

G: C=C stretch (sharp)

J: C-O stretch (strong, medium)

K: C-X stretch (sharp)

IR spectrum of hexanoic acid

Functional Group Region:

1550-4000 cm -1

Most useful portion

Fingerprint Region:

400-1550 cm -1

More difficult to interpret

An IR Spectrum

O-H stretches are broad due to H-bonding.

Sample Problem 1

Indicate how the following pairs of compounds could be distinguished using characteristic IR peaks:

(a) Benzaldehyde (C

6

H

5

O) and benzoic acid (C

6

H

5

COOH)

1. Consider each structure:

O

H

O

OH benzaldehyde Benzoic acid

2. Determine the main differences that would be seen in IR. Use correlation chart.

Sample Problem 2

An unknown oxygen-containing compound is suspected of being an alcohol, a ketone, or a carboxylic acid. Its IR spectrum shows a broad strong peak at 3100-3400 cm -1 and a strong, sharp peak at 1700 cm -1 . What kind of compound is it?

Consider what type of bonds appear in the ranges given. Refer to correlation chart.

Broad peak at 3100-3400 cm -1

Strong, sharp peak at 1700 cm

-1

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