BIOLOGY102COURSESYLLABUSFORSPRING2016 CourseDescription ThiscourseisacontinuationofBIO101.Topicsincludeevolution,biologicaldiversity,plantstructureandfunction,animal systems,anddevelopmentandreproduction,andintroductoryconceptsofecology.Thelaboratoryreinforcesconcepts discussedinlectureemphasizingevolution,plantandanimaldiversity,andanatomyandphysiologyofselectedplantsand animals.Therearethreehoursoflectureandtwohoursoflaboratoryperweek. StudentsreceivingcreditforBIO101and/orBIO102cannotreceivecreditforBIO100. CreditHours:4;ContactHours:5 Instructor Dr.MichaelGregory Office:219T,Phone:562-4336 OfficeHours:M,W12:00-01:15,TH10:00-12:00,F9:30-10:00 E-mail:Michael.Gregory@clinton.edu CourseRequirements Textbook–BiologybyOpenStaxCollege.Thisisafree,onlinetextbook.Thetextbookcanbedownloadedorviewedonline usingthefollowingURL:https://www.openstaxcollege.org/textbooks/biology/get Safetyglasses Quad-ruledcompositionnotebook AccesstotheInternet. TheBiologyWeb(http://faculty.clinton.edu/faculty/Michael.Gregory/Default.htm) containsthelabmanual,lecturenotes,andotherresourcesneededforthecourse.Alinkto facultywebsitescanbefoundonthecollegehomepage(http://www.clinton.edu/). StudentsarerequiredtochecktheirClintonCommunityCollegee-mailregularly throughoutthesemester.ImportantcourseannouncementswillbemadeviaCCCstudent e-mailaccounts. Prerequisite:BIO101orequivalent Corequisite:ENG101orequivalent TheBiologyWeb TopicsandReadingAssignments Eachreadingassignmentsinthetablebelowshouldbecompletedwhenthetopicisdiscussedinclass. BiologyWebChapter EvolutionandPopulationGenetics Speciation HistoryofLife Phylogeny Prokaryotes:BacteriaandArcheae Protists SeedlessPlants SeedPlants Fungi IntroductiontoAnimals Sponges,Cnidarians Flatworms,Mollusks,Annelids,Roundworms,Arthropods,Echinoderms Chordates AnimalTissues NervousSystem:Neurons NervousSystems SensorySystems MotorSystems CirculatorySystem RespiratorySystem ImmuneSystem EndocrineSystem DigestiveSystemandNutrition ExcretorySystem ReproductiveSystem AnimalDevelopment TextbookChapter Exams 19 18 Exam1 20.1,20.2 22 11.2,23 25 26 24 Exam2 27 28.1,28.2 28.3,28.4,28.5 29 Exam3 33 35.1,35.2 35.3,35.4 36 38 40 39 42 Part1ofFinalExam 37 34 41 43.1through43.5 43.6,43.7 LaboratoryTopics Date 1/28 2/4 2/11 2/18 2/25 3/4 Topic EvolutionandPopulationGenetics HistoryofLife–Videoandexercise Phylogenetics Prokaryotes Protists Plants1:SeedlessPlants ChemotaxisinSlimeMolds(Protists) 3/11 Plants2:SeedPlants 3/25 Fungi 4/1 Animals1:Sponges,Cnidarians,Flatworms 4/8 Animals2:Mollusks,Annelids,Roundworms 4/15 Animals3:Arthropods,Echinoderms 4/22 Animals4:Chordates,Videoexercise 4/29 AnimalTissues,videoexercise 5/6 RespiratorySystem FinalsWeek MammalDissection Sheeporgans(Dissection) Submission Nextweek,online Labnotebook LabnotebookandFormallabreport Labnotebook 2 Grading GradingScale A A- B+ B B- C+ 90-100% 87-89% 84-86% 80-83% 77-79% 74-76% C C- D+ D F 70-73% 67-69% 64-66% 60-63% <60% FinalGrade Item LectureExams(3) FinalExam(Halfofthisexamiscumulative.) ClassAssignments(Portfolio) LaboratoryQuizzesandLabReports(approximately14quizzes) FormalLabReport LabNotebook %ofFinalGrade 42(14%each) 28 5 15 5 5 ExamandQuizSchedule LectureExamDates Exam Date Exam1* 2/17 Exam2* 3/11 Exam3* 4/13 FinalExam Finalsweek *Datesforthefirstthreeexamsmaychange.Allchangeswillbeannouncedinclass. FinalsWeek Classesdonotmeetattheirnormallyscheduledtimesduringfinalsweek.BIO101willmeettwotimesfor2.5hourseach time.Thedatesandtimesfortheseclasseswillbeannouncedinclassandpostedonthecollegewebsite. LaboratoryQuizzes Therewillbeapproximately14laboratoryquizzes.Laboratoryquizzeswillbetakenatthestartofeachnewlaboratory topic.Thequizwillcovermaterialfromthepreviouslabtopic. Make-upExams Ifanexamcannotbetakenduringtheregularlyscheduledtime,amake-upexamcanbetakenlater.Make-upexamsmay containmostlyessayandshort-answerquestions. Laboratoryquizzescannotbemadeup.Studentsthatmissalaboratoryshouldstudythemissedmaterialandbeprepared forthenextquiz. 3 Assignments Duedatesforthereadingassignmentswillnotbeannouncedduringclasstime.Eachreadingassignmentsshouldbe completedwhenthetopiciscoveredinclass. Studentsshouldkeepbackupcopiesofallsubmittedassignmentsuntiltheendofthesemester.Cellphonecamerasare convenientforphotographinghandwrittenmaterialsforbeforesubmittinginclass.Photographs,photocopies,orcomputer filesareallgoodmethodsforkeepingbackupcopies. Allwrittenassignmentsshouldbecompletedusingwholesentences.Abbreviatedwordsshouldnotbeused. Allsubmittedworkmustbeinyourownwords.Ifyouworkwithapartneronanassignmentthatrequiresindividual submission,youmustsubmityourowndocumentusingyourownwords.Youmayobtainordiscussanswerstothe exercisesfromanysourcethatisapplicable,butyoumustuseyourownwordstoanswerthequestionsorwritethe reports.Documentsthatappeartohavebeencopiedfromotherswillnotreceiveagrade(grade=0). Ifyouuseinformationfromanothersourceinanassignment,itmustbestatedinyourownwords.Whileitislegaltocopy word-for-wordifitisproperlycited,thisisusuallypoorwritingstyleanditisnotallowedinthiscourse.Inadditionto rewording,youmustalsostatewheretheinformationcamefrom.Forpurposesofthiscourse,itisnotnecessarytostate thesourceofinformationobtainedfromthecoursetextbookorTheBiologyWeb.Allothersourcesofinformationshould beidentified. Assignmentssubmittedinclassaredueatthebeginningofclassontheduedate.Assignmentsthatareturnedinafterclass hasstartedontheduedatewillbeconsidered1daylate.Assignmentssubmittedonlinemustbesubmittedbefore midnightontheduedate. Scoresonallassignmentsexcepttheformallabreportwillbereducedby10%oftheirtotalpossiblepointvalueiftheyare onedaylateand20%iftheyaretwodayslate.Theywillnotbeacceptedaftertwodays.Scoresontheformallabreport willbereduced1%foreachdaylate.Allassignmentsandmake-upexamsmustbecompletedbeforefinalsweekbegins. Attendance Theinstructorreservestherighttowithdrawstudentsthatmissmorethan8classes(includinglabs)ormorethan2labs. Thelaboratoryclassisdesignedtoprovidehands-onlearningexperiences.Studentswilllearnbasiclaboratoryskillswhile reinforcingconceptslearnedinlecture.Toalargeextent,gradesinthelaboratorywillreflectparticipationandlaboratory skillsacquired,soitisimportantthatstudentsdonotmisslaboratoryexercises. Absencescannotbemadeup.Thisincludesabsencesfromthelaboratoryorfromlectureclasses. Studentsarerequiredtoattendlectureandlaboratoryclassesfortheentireperiod.Studentsthatarrivelateorleaveearly willbemarkedasabsent.Similarly,studentsthatsleepduringclassordonotparticipateinclassactivitieswillbemarkedas absent. ExtraCredit Extracreditisnotavailableinthiscourse.Thetopicsandassignmentslistedinthesyllabushavebeenselectedasthebest waytomeetthecourseobjectives. E-mailCommunication Studentsareencouragedtomaintainfrequentcommunicationwiththeirinstructor.E-mailisaconvenientwaytoask questionsaboutanyofthematerialcoveredinthecourse.Pleaseaskquestionsonanymaterialthatisnotclearly understood. 4 E-mailfromstudentsshouldcontainaminimumlevelofprofessionalcourtesy.Forexample,itshouldnotcontain abbreviationssuchas"u"insteadof"you"anditshouldnotcontainincorrectcapitalizationsuchas"i"insteadof"I." Sentencesshouldbeginwithacapitalletterandendwithaperiod.Theinstructorwillnotreadorreplytoe-mailmessages thatcontainthesegrammaticalerrors. AcademicIntegrity AcademichonestyisexpectedofallClintonCommunityCollegestudents.Itisdishonesttomisrepresentanotherperson’s workasone’sown,totakecreditforsomeoneelse’sworkorideas,toaccepthelponatest,toobtainadvanced informationonconfidentialtestmaterials,ortointentionallyharmanotherstudent’schancesforacademicsuccess. StudentswithDisabilities Ifyouhave,orsuspectthatyoumayhaveanytypeofdisabilityorlearningproblemthatmayrequireextraassistanceor specialaccommodations,pleasespeakwithmeprivatelyafterclassorduringmyofficehoursassoonaspossiblesothatI canhelpyouobtainanyassistanceyoumayneedtosuccessfullycompletethiscourse.YoushouldalsocontactLaurie Bethka,EXT252(room420M)forfurtherassistance. TutoringCenter TheTutoringCenterprovidestutoringservicesforallstudentsenrolledatClintonCommunityCollege.TheTutoringCenter staffworkswithstudentstodevelopstudyskillsandstrategiesforacademicsuccess.Tutorsareavailabletoassiststudents inmath,science,writing,reading,computersandsomespecializedtechnologycourses.TheCenter,locatedonthe4thfloor ofthemainbuildingroom412M,offersindividualandsmallgrouptutoringservices.Onlinetutoringisalsoavailable.For moreinformationaboutthetutoringschedulegotohttp://www.clinton.edu/tutoringcenter/tutorschedule.cxml. CourseContinuityPlan Inthecasethatthecollegeofficiallyclosesbecauseofanemergencythatcausesashort-termdisruptionofthiscourse,we willusee-mailtocontinuethiscourseintheshortterm(1-3weeks).Allstudentsmustusetheircampuse-mailtoreceive courserelatedinformation. Changes Thedetailsofthissyllabus,includingtopicscovered,calendar,grading,gradingscale,andattendancepolicyaresubjectto change.Changesinthegradingscalewillbelimitedtothosethatresultinimproved(curved)grades.Youwillbeinformed inclassofanychanges.AllchangestothesyllabuswillalsobepostedontheInternetinTheBiologyWeb. TechnologyStatement ACCCstudentshouldexpectthatanyclassmayrequiresomecourseactivitythatusesacomputerandthe internet.Activitiescouldincludebutarenotlimitedtoaccessingthecoursesyllabus,schedule,orotherhandoutsona website,completinghomeworkonline,takingquizzesorsubmittingwrittenwork,participatinginadiscussionor sending/receivingemail. CourseObjectives Astheresultofinstructionalactivities,studentswillbeableto: Evolution • Explaintheevidencethatsupportsthetheoryofevolutionincludingthefossilrecord,biogeographic,biochemical, morphological,andmolecularphylogenicevidence. • Describethemajorevolutionaryeventsinthehistoryoflife. • Evaluatemodelsabouttheoriginoflifeonearth. 5 • • Explainhoworganismsarecategorizedbasedonevolutionarychanges. Usephylogenictreesand/orcladogramstoinferhypothesesabouttheevolutionaryrelationshipsbetweenorganismsto showthatorganismsarelinkedbylinesofdescentfromcommonancestry. UsetheHardy-WeinbergLawtoevaluatepopulationgeneticsdata. Evaluateevidencetoinvestigatetheroleofnaturalselectioninevolution. Explaintheroleofmutation,geneticvariation,andsexualreproductioninevolutionarychange. Identifyfactorsthataffectspeciationincludingallopatric,geographical,andreproductiveisolatingmechanisms. • • • • Viruses • Describethestructureofavirus. • Describereproductioninbacteriophages,animalvirusescontainingDNA,andretroviruses. Bacteria • Describehowrepresentativeprokaryoticorganismsobtaintheirenergyandnutrients,wheretheyfoundinthe environment,theirimportantrelationshipswithotherorganisms,andimportantadaptations. • Describethemechanismsofgeneticvariationinbacteriaincludingconjugation,transformation,transduction,transposition, andmutation. • Comparereproductioninprokaryoticorganismstothatofrepresentativeeukaryoticorganisms. EukaryoticDiversity • Comparethelifecyclesandreproductivestructuresofmajorrepresentativephyla. • Describehowrepresentativeeukaryoticgeneraobtaintheirenergyandnutrients,whereeachrepresentativeorganismcan befoundintheenvironment,theirimportantrelationshipswithotherorganisms,reproductionandimportantadaptations. • Describethecharacteristicsthatdefinephylumchordataandclassmammalia. • Identifythreeembryonictissuesanddescribethetissuesthattheygiverisetoinanimals. • Describethedevelopmentofembryonicgermlayers,symmetry,bodycavity,andgutinthemajorphylaofanimals. • Explainthedifferencebetweenopenandclosedcirculatorysystemsandgiveexamplesofanimalswitheachtype. • Compareandcontrastthestructureandfunctionofcirculatory,digestive,excretory,respiratory,andreproductivesystems inrepresentativesofthemajorphylaofanimals. • Describethedifferencesbetweencell-mediatedandhumoralimmuneresponses. • Describethestructureandfunctionofskeletal,smooth,andcardiacmuscle. • Explainhowactionpotentialsarepropagatedalonganeuron. • Describephysiologicalmechanismsthatleadtothereleaseofneurotransmitterandexplainhowneurotransmitteris removedfromthesynapticcleft. • Statetherelationshipbetweenthehypothalamusandtheposteriorandanteriorpituitarysecretions. • Describehownegativefeedbacklimitsthesecretionofhormonesbythepituitaryandotherendocrineglands. Ecology • Describethemajorfactorsthataffectthedistributionofspeciesinterrestrialandaquaticenvironmentsandexplainhow eachfactoraffectstheorganismsineachofthemajorbiomes. • Distinguishbetweenexponentialgrowthandlogisticgrowth. • Distinguishbetweendensity-dependentanddensity-independentpopulationgrowth. • Describetheagestructureofstable,declining,andincreasingpopulations. • Defineecologicalniche. • Explainthecompetitiveexclusionprinciple. • Explaincharacterdisplacement. • Giveanexampleofakeystonespeciesandexplainhowitaffectscommunitystructure. • Explainhowdisturbanceaffectscommunitystructure. • Describehowprimaryandsecondaryecologicalsuccessionoccurandgiveanexampleofeach. • Explainhowgeographicfactorsaffectbiodiversity. • Explainwhyhighertrophiclevelshavelessbiomass. 6 Giveanexampleofanutrientcycleanddescribethenutrientasitisstoredorpassedbetweenmajorcomponentsofthe cycle. LaboratoryObjectives Laboratoryexerciseswillengagestudentsinactivitiesthatreinforcelectureconcepts.Studentswill: • Analyzedatafromfossil,anatomical,andgeneticevidencetosupportconverginglinesofevidenceforthetheoryof evolution. • Exploretheconceptofvariationtoreinforcenaturalselectionoperatesonpopulationsthathavevariablecharacteristics. • Investigatepopulationgeneticstoexplaintheeffectofnaturalselectiononpopulations. • Prepareagramstainofgrampositiveandgramnegativeorganismsandcomparetheseslideswithpreservedspecimens. • Useaseptictechniquetoinoculateagarplates,slants,broths,ordeeptubeswithbacteria. • Observepreservedorlivespecimensofrepresentativesofeachofthemajorphylaofprotists,fungi,plants,andanimals. Foreachrepresentativespecies,studentswillidentifyimportantstructuresthatarecharacteristicofthattaxonomicgroup andstatethefunctionofthestructureorhowitcontributestosurvival.Theseincludedetailsregardingadaptations, reproduction,ecologicalsignificanceofthegroup,oranyothersignificantinformation. • Investigateplantmorphology,physiology,andlifecyclesofseedlessandseedplants. • Performdissectionsonandidentifymajorstructuresofrepresentativeorganismsfromthemajorphylasuchas: Aflower Roundworm Earthworm Clam Crayfish Seastar • Observepreparedmicroscopeslidesoftissueandidentifythecharacteristicsthatdistinguisheachtissuedescribedbelow: o Epithelialtissue:cuboidal,columnar,pseudostratified,andsimpleandstratifiedsquamoustissue o Connectivetissue:Adipose,loose(areolar),dense,cartilage,bone,andblood o Muscletissue:skeletal,cardiac,andsmooth o Nervous:atypicalmotorneuron • Dissectadoubly-injectedmammalsuchasafetalpigandidentifymajorstructuresandtheirfunctionofthefollowing systems: o Circulatory-Identifystructuresoftheheartandthemajorbloodvessels. o Digestive o Endocrine o Excretory o Reproductive-Identifytheanatomyofbothmaleandfemalespecimens. o Respiratory • Investigateoneoftheecologyconceptslearnedinlectureusingeitheraninquirybasedlaboratoryexerciseinvolving measurementoracomputersimulation. • Usingscientificmethodology,developanexperimenttoinvestigateatestablequestionintheformofahypothesisabouta speciesofbacteria,protist,fungi,plantoranimal. • Communicatefindingsfromlabobjective#12(orotherinquirybasedlabinvestigation)inwrittenformattoincludea hypothesis,astatisticaltestofthehypothesis,aconclusionbasedonthestatisticaltest,agraph,atable,andliterature cited. • 7