Chapter 5 Activity: Identifying Macromolecules Organic macromolecules can often seem large and overwhelming upon first inspection with possibly hundreds of atoms comprising their complex structures. But a closer, more careful look will reveal repeatable patterns of atoms which gives clues to the type of macromolecule. Learning a few simple rules can go a long way to revealing the identity of the macromolecule. The following exercise will help you figure out some of those rules. Work through the questions within your lab group and try to come to a consensus on some ways you could distinguish different macromolecules, filling out the chart at the end. 1.) Which of the macromolecules can be composed of carbon (C), hydrogen (H) or oxygen (O) alone? CARBOHYDRATES, SOME LIPIDS 2.) Which of the macromolecules must have their C, H, and O in a 1:2:1 ratio? CARBOHYDRATES 3.) Which of the macromolecules must contain phosphorus (P)? NUCLEIC ACIDS, PHOSPHOLIPIDS 4.) Which of the macromolecules must contain nitrogen (N)? NUCLEIC ACIDS, PROTEINS 5.) If you wanted to label only the RNA in a cell and not DNA, what compound(s) could you label that are specific for RNA? URACIL; RIBOSE 6.) If you wanted to label only the DNA, what compound(s) could you label? THYMINE; DEOXYRIBOSE 7.) An RNA virus contains only RNA and a protein covering. You want to label to tag only the RNA in the virus. Which of the following would you use? Explain your answer. A. Phosphorus B. Nitrogen C. Sulfur D. Carbon All macromolecules have carbon so D. is out. Proteins only have sulfur so C. is out. Both nucleic acids and proteins have nitrogen so B. is out. That leaves only phosphorus which RNA but proteins do not. 8.) You are given an unknown white powdery substance and are asked to identify it as a carbohydrate or 1 a lipid. How could you distinguish between the two? (Hint: Assume you have a source of water) Attempt to dissolve in water. If water is a good solvent for the substance, it is a carbohydrate. If it doesn’t dissolve, it is a lipid. 9.) How could you distinguish a phospholipid from a fat? (Again, you have water.) Fats are entirely hydrophobic so they will form a top or bottom layer with water. Phospholipids are amphipathic and will form bilayers in water like cell membranes. 10.) Based on your answers to the previous questions, develop some simple rules you can use to identify the following macromolecules. Type of Rules macromolecule Name of Monomer Carbohydrates Made only of carbon:hydrogen:oxygen Monosaccharide Lipids Proteins Nucleic acids in a 1:2:1 ratio. Possess a carbonyl group, either a ketone or an aldehyde. Are hydrophilic due to many hydroxyl groups. Can be made of just carbon, hydrogen No monomer and oxygen in fats but not in a 1:2:1 ratio. Can have long, hydrophobic hydrocarbons (fatty acids). Some lipids are amphipathic and possess hydrophilic groups. Proteins arephosphate made of amino acids and Amino acid Steroids 4 ring structures lack all animoare acids have an aminothat group fatty acid tails. which must have N and a carboxyl group. Some R groups can have sulfur. All nucleic acids are made of Nucleotide nucleotides which will have a 5C sugar, a phosphate group so they will all have phosphorus and one of the 5 possible nitrogenous bases so they will have nitrogen. 2 Name of bond b/t monomers Glycosidic linkage Bond that joins fatty acid tails to glycerol is ester linkage Peptide bond Bond that joins sugars and phosphate is phosphodiester bond. H bonds b/t complementary bases.