GHSGT BIOLOGY REVIEW Biology- study of life Bio- life -ology study of Branches of Biology Zoology- study of animals Botany- study of plants Microbiology- study of bacteria, viruses, and protozoa Genetics- study of heredity Ecology- study of the environment and its effects on living things Cellular Basis of Life Cell Theory 1. All living things are made up of at least one cell. 2. Cells are the basic units of structure and function. 3. Cells come from other cells of like kind. Animal Cells Plant Cells: 3 differences between plant and animal cells: 1. Plant cells have a cell wall. 2. Plant cells have a large central vacuole. 3. Animal cells have centrioles. Common Cell Organelles Structure Cell membrane Location Around cell Cytoplasm Throughout cell Nucleus Nucleolus Nuclear membrane Center Nucleus Around nucleus Chromosomes Nucleus Ribosomes Endoplasmic reticulum Throughout cell Cytoplasm Golgi apparatus Cytoplasm Mitochondria Cytoplasm Lysosomes Cytoplasm Microtubules/Microfilaments Cytoplasm/Cell Membrane Cilia/flagella Outside surface Vesicles Cytoplasm Function Maintains cell shape and controls flow of materials into and out of cell Fluid substance which contains cell parts Contains chromosomes Production of ribosomes Controls entrance into and out of nucleus Determine genetic traits; provide instructions for protein production Protein production Site of protein production and transport Packaging and transporting of materials from the endoplasmic reticulum Site of energy production for the cell Contain digestive enzymes; remove waste Form the cytoskeleton, or framework, of cell; provide channels for the transport of materials. Movement of materials for the entire cell Sacs pinched off from the cell structures; contain materials for transport into or out of the cell Cell Transport and Homeostasis Homeostasis- process of keeping the cell and its surroundings the same Examples: controlling the temperature, pH, amount of water, amount of salts, and amount of oxygen in an organism Passive transport- moving things into and out of a cell without using energy Active transport- moving things into and out of a cell in a way that requires energy Cell membrane is semipermeable. This means that some things can fit through the membrane without help. Water is one of those things. Other things are too large to fit through and have to go through a special hole in the membrane. These holes are like doors and require energy to open and close. Some things are so large that the cell has to bend around them and enclose them. Passive Transport Mechanisms: Diffusion- movement of molecules from an area of higher concentration to an area of lower concentration Example: Spraying perfume in one corner of the room, and after a few minutes being able to smell it all over the room Osmosis- Diffusion of water Isotonic- same concentration of water on both sides of the membrane, there is the same amount of water going in as coming out Hypertonic environment/ hypotonic inside cell- More solute outside of the cell, higher concentration of water inside the cell, water moves out of the cell, the cell shrinks Plasmolysis- cell shrinkage caused when water leaves the cell Hypotonic environment/ hypertonic inside cell- More solute inside cell, more water outside cell, water moves into the cell, could cause the cell to burst Cytolysis- the bursting of the cell due to too much water entering Facilitated diffusion- similar to diffusion except that the materials must pass through special carrier molecules which allow the materials to get across the membrane faster Gated channels- special proteins that allow materials in as needed by the cell Active Transport Mechanisms: Sodium potassium pump- used to move materials against the concentration gradient from an area of lesser concentration to one of higher concentration Endocytosis- when the cell surrounds a material and takes it into itself Pinocytosis- taking in water and fluids by enclosing them Phagocytosis- taking in solids by enclosing them Exocytosis- when the cell expels waste by a vesicle membrane fusing to the cell membrane and then opening to the outside of the cell and putting out the waste CHEMICAL BASIS OF LIFE ATOMS combine to make ORGAN SYSTEMS MOLECULES combine to make MACROMOLECULES make up the work together to make ORGANISM! make up a ORGANELLES ORGANS function as part of a combine to form TISSUE combine to form CELL Inorganic compounds- nonliving Organic compounds- living Six elements present in all living things: Carbon (C) Hydrogen (H) Oxygen (O) Nitrogen (N) Sulfur (S) Phosphorous (P) Water- Most important inorganic compound in living things H2O Polar- has positive end and negative end Universal solvent- can dissolve many substances Dissolves polar substances but does not dissolve nonpolar substances Like dissolves like Oil and water don’t mix CarbohydratesMade of carbon, hydrogen, and oxygen Monomers- building blocks Monosaccharides- one sugar Disaccharides- two sugars Polysaccharides- many sugars Used for energy LipidsFats, oils, and waxes Non-polar, do not dissolve in water Fatty acids- polar end with a long non-polar chain Fats and oils are triglycerides- 3 long chains attached to a glycerol molecule Hydrophilic- water loving Hydrophobic- water fearing ProteinsMade up of amino acids Contain nitrogen Only 20 amino acids 2 amino acids linked together called a dipeptide many amino acids linked together called polypeptide protein formed when 2 or more polypeptides join together Enzymes- proteins that act as catalysts helping other reactions take place in a cell; enzymes speed up reactions. Enzymes work with only a specific molecule, this molecule is called its substrate Nucleic AcidsStore the information in the cell DNA- Deoxyribonucleic Acid- Found in chromosomes in the nucleus; stores the genetic information, gives instructions to the cell RNA- Ribonucleic Acid- used to transport the instructions from the DNA in the nucleus to the ribosomes outside the nucleus Monomers for RNA and DNA are nucleotides COMMON LIFE FUNCTIONS Absorption- taking in nutrients, oxygen, and water from the surroundings Excretion- getting rid of wastes Digestion- breaking down food into nutrients used by the cells Biosynthesis- process of using food to make new cells and cell parts Secretion- release of enzymes that control cell processes in the organism Reproduction- creation of a new organism like the parent organism Response- reacting to a stimulus Adaptation- changing to help the organism survive better in the environment Energy use- obtaining energy either from food, the sun, or chemicals Photosynthesis- the process of making food from light used by green plants Energy + 6CO2 + 6 H2O C6H12O6 + 6 H2O Respiration- breaking down glucose to form energy and carbon dioxide C6H12O6 + 6 H2O Energy + 6CO2 + 6 H2O Chemosynthesis- gaining energy from chemicals in the environment All life requires energy. All energy comes from the sun. Energy is stored in ATP. Energy is released by breaking ATP down into ADP. Energy is added back by adding another phosphate group to ADP to form ATP. Stimulus- a cause, anything that causes an organism to react Response- the reaction of an organism to a stimulus Behavior- a complex group of responses Reflex- involuntary response (not controlled) Instinct- genetically controlled behavior EVOLUTION Theories of Evolution Jean Baptiste de Lamarck developed the theory of the inheritance of acquired characteristics in 1809. This theory said that organisms changed to meet the needs of their environment such as a giraffe’s neck stretching as it reached to get food. He said that these useful characteristics would be passed on to the next generation. He also said that traits not used would “waste away” This theory has been proven false. Charles Darwin developed the theory of natural selection. This theory states that animals who are better suited to their environments will live longer and reproduce more offspring, thus passing on the traits that made them better suited to more of the next generation. This theory is also called survival of the fittest. Fossils (traces of previously living organisms) are the most convincing evidence for evolution. Fossils can be dated by radioactive dating (used to find the age of the fossils). Homologous structures (similar structure, different function) also provide evidence for evolution. Analogous structures have different structure but similar function. Vestigial organs- similar structure to organs in other organisms but have no apparent function Adaptation- characteristic that makes a species more suited to its environment, not a change in an organism Convergent evolution- different species becoming more alike Divergent evolution- similar species becoming more different Coevolution- when one organism’s adaptation causes a second organism to adapt (example: a plant develops a poison, and the predator develops and immunity to the poison) Extinction- when all the organisms of the species are dead Mass extinction- massive changes cause the extinction of many species REPRODUCTION Asexual reproduction- requires only one parent, reproduction without sex Sexual reproduction- requires cells from two parents Gametes- sex cells, the cells involved in the formation of offspring Spermatozoan or sperm- male sex cell Ovum- female sex cell, also called an egg Fertilization- uniting of egg and sperm to form a zygote Zygote- a fertilized egg Embryo- developing offspring PLANT REPRODUCTION In plants, fertilization occurs when pollen is transferred from the anther of one flower to the stigma of another flower. The pollen grain produces a tube which grows down the style into the ovary. The sperm inside the pollen grain moves down the tube into the ovary to fertilize an ovule. Germination occurs when a seed splits and the new plant begins to grow. Mitosis- one way cells make new cells Pass Me A Tissue Prophase Metaphase Anaphase Telophase Mitosis is used to reproduce asexually. Asexual reproduction includes the following: Budding- part of the cytoplasm breaks off and develops into a new organism Vegetative propagation- part of the plant is broken off and develops into a new plant Spore formation- fungi or mosses reproduce from haploid (half the number of chromosomes) cells that develop into organisms Binary fission- division of a parent cell into two separate organisms that then develop into adults Interphase- time in the cell cycle when the cell is not actively dividing. Chromatin- the DNA during interphase, scattered throughout the nucleus in thin strands MEIOSIS Diploid parent (two of each chromosome) divides into 4 haploid (one of each chromosome) daughter cells Creates sex cells Spermatogenesis- creation of sperm Oogenesis- creation of eggs Gametogenesis- creation of gametes Pass Me A Tissue…. Pass Me A Tissue!!!!! GENETICS Gregor Mendel experimented with pea plants and discovered that traits were passed from parent to offspring. He discovered this by keeping detailed records and providing for careful controls during his experiments. He recognized a pattern of inheritance . Gene- DNA segment that controls a single inherited characteristic Alleles- pair of genes Dominant- a gene that overpowers, masks, or hides the expression of the recessive gene; represented by a capital letter Recessive- a gene that can only be expressed if there is no dominant gene present; represented by a lower case letter Genotype- Gene types present Phenotype- physical expression of the genes Homozygous- two of the same allele, two dominant or two recessive Heterozygous- one of each allele, one dominant, one recessive Codominance- when neither allele is truly dominant and both are expressed in the heterozygous phenotype (red and white flowers making pink flowers) Incomplete Dominance- when both genes are dominant ( a white chicken and a black chicken making and black and white checked chicken) Punnett squaresUsed to predict the phenotype and genotype of offspring Green seed color dominant to yellow seed color: 100 % Gg GG Gg Gg Gg Gg Gg 100 % green Gg gg 25% GG 50% Gg 25 % gg 75 % green 25 % yellow GENETIC DISEASES Codon- three nucleotides that tells which amino acid is added next Mutation- change in one or more base pairs Point mutation- a specific base is substituted for another Frame-shift mutation- involves gaining or losing a base and shifting the codons Lethal genes- genes that cause an organism to be less well adapted to its environment, or a gene that causes the death of the offspring before birth Mutagens- cause mutations; the three most common are radiation, drugs (chemicals), and viruses Down Syndrome Too many or too few chromosomes Turner Syndrome (Chromosomal abnormalities) Extra 21st chromosome Results in extra skin around the eye, learning problems, and heart problems Only one X chromosome Female child does not develop properly and cannot bear children Klinefelter Syndrome Phenylketonuria Gene Mutation Cystic Fibrosis Gene Mutation cont. Dyslexia One dominant gene not a sex chromosome Huntington’s disease One dominant gene not a sex chromosome Hemophilia Sex Linked (on X or Y chromosome) XXY Male child with low mental ability and little chance of reproducing Lack an enzyme Two recessive to digest genes phenylalanine in foods a build up causes brain damage Offspring Two recessive produces excess genes mucous in the lungs, offspring tend to die young before age 25 Causes offspring to read words backwards, or confuse letters Loss of muscle control and mental ability Causes death Symptoms do not appear until around age 40 Only on X chromosome Recessive No match on the Y Seen almost exclusively in males (XY) Causes uncontrolled bleeding Clotting agent in blood not present Red-Green Color Blindness XXXY- Only on X chromosome Recessive No match on the Y Seen almost exclusively in males (XY) Unable to distinguish between colors most commonly red and green female offspring male offspring Sickle cell anemia- red blood cells become misshapen and cannot carry oxygen The blood cells get stuck in the smaller capillaries. Causes anemia, pain, fatigue, cramps, and organ damage. Some mutations can be useful. Genetic engineering uses those good mutations to give specific traits to plants and animals. DNA REPLICATION DNA is the instructions for the cell. DNA is made up of nucleotides. Phosphate Nitrogenous base 4 Nitrogenous bases 5carbon sugar Adenine (A) Thymine (T) Guanine (G) Cytosine (C) A always goes with T G always goes with C ATCGATTGGCC TAGCTAACCGG DNA strands are shaped together in a double helix DNA reproduces itself in a process called Replication The two DNA strands uncoil and separate from each other. Once apart special molecules bring new nucleotides (either A,T, G, or C) to create a complementary pair. The result is two DNA strands just alike. CLASSIFICATION Taxonomy- the study of classification Kings Play Chess On Fine Green Stools Kingdom Phylum Class Order Family Genus Species Prokaryotic- cell without a nucleus Eukaryotic- cell with a true nucleus TODAY'S SIX KINGDOMS ARE: ARCHAEBACTERIA, EUBACTERIA, PROTISTA, FUNGI, PLANTAE, AND ANIMALIA. 1) KINGDOM ARCHAEBACTERIA: The prefix archae - comes from the Greek Word "ANCIENT". Modern Archaebacteria MAY BE Directly descended from and very similar to the First Organisms on Earth. They Are UNICELLULAR PROKARYOTES with distinctive Cell Membranes as well as Biochemical and Genetic Properties that Differ from ALL Other Kinds of Life. Some are AUTOTROPHIC, producing food by CHEMOSYNTHESIS. Most are HETEROTROPHIC. Many Archaebacteria LIVE in HARSH ENVIRONMENTS such as Sulfurous Hot Springs, Very Salty Lakes, and in ANAEROBIC Environments, such as the Intestines of Mammals. Includes Chemosynthetic Bacteria. 2) KINGDOM EUBACTERIA: The EU part of Eubacteria means "TRUE". They are UNICELLULAR PROKARYOTES. Most of the Bacteria (Germs) that affect your life are members of the Kingdom Eubacteria. Eubacteria are both AUTOTROPHS and HETEROTROPHS. Includes the Diesease-Causing Bacteria such as tooth decay or food poisoning. The Combined Kingdoms, Archaebacteria and Eubacteria include the Greatest Number of Living Things on Earth. ALL OF THE PROKARYOTES ARE IN THESE TWO KINGDOMS. Both Reproduce By Binary Fission, but they do have some ways to Recombine Genes, allowing Evolution (CHANGE) to occur. 3) KINGDOM PROTISTA: "THE ASH AND TRASH KINGDOM". These organisms are placed here more because of What They Are Not than What They Are. Kingdom Protista contains All Eukaryotes that are NOT Plants, Animal, or Fungi, more than 50,000 Species in all. Kingdom Protista includes UNICELLULAR and a few simple MULTICELLULAR EUKARYOTES. Eukaroyotic cells have nuclei and organelles that are surrounded by membranes. The cells of multicellular protists are not specialized to perform specific functions in the organisms. Includes Euglena and Amoebas. 4) KINGDOM FUNGI. Fungi are Eukaryotes, and most are MULTICELLULAR. The cells of fungi have cell walls that contain a material called CHITIN. These organisms are HETEROTROPHIC AND OBTAIN THEIR NUTRIENTS BY RELEASING DIGESTIVE ENZYMES INTO A FOOD SOURCE. They absorb their food after it has been Digested by the Enzymes. Fungi act either as DECOMPOSERS OR AS PARASITES IN NATURE. KINGDOM FUNGI INCLUDES MOLDS, MILDEWS, MUSHROOMS, AND YEAST. 5) KINGDOM PLANTAE. Plants are EUKARYOTE, MULTICELLULAR and carry out PHOTOSYNTHESIS (AUTOTROPHS). The cells of plants have CELL WALLS, that contain the POLYSACCHARIDE CELLULOSE. PLANT CELLS ARE SPECIALIZED FOR DIFFERENT FUNCTIONS, SUCH AS PHOTOSYNTHESIS, THE TRANSPORT OF MATERIALS, AND SUPPORT. KINGDOM PLANTAE INCLUDES MOSSES, FERNS, CONE-BEARING PLANTS (GYMNOSPERMS), AND FLOWERING PLANTS (ANGIOSPERMS). 6) KINGDOM ANIMALIA. Animals are MULTICELLULAR, EUKARYOTES, AND HETEROTROPHIC. Animal cells have NO CELL WALLS. Most members of the Animal Kingdom can move from place to place. Some are Permanently attached to surfaces such as Sponges and Barnacles. FISH, BIRDS, REPTILES, AMPHIBIANS, AND MAMMALS-INCLUDING HUMANS BELONG TO THE KINGDOM ANIMALIA. THIS KINGDOM ALSO INCLUDES SPONGES, JELLYFISH, WORMS, SEA STARS, AND INSECTS. KINGDOMS Characteristic Archaea Cell Type Prokaryotic Nutrition Heterotrophs (Absorption) Bacteria Prokaryotic Photosynthesis; Chemosynthesis; Absorption Body Form Mostly unicellular; some colonial Asexual Mostly unicellular; some colonial Present in some Present in some Reproduction Locomotion Asexual Protista Eukaryotic Photosyntheis; ingestion or absorption Most unicellular; some simple multicellular Asexual & Sexual Present in some Fungi Eukaryotic Absorption Plantae Animalia Eukaryotic Eukaryotic Photosynthesis Ingestion Most Multicellular multicellular Asexual & Sexual Absent Sexual Multicellular; Organs & Organ Systems Sexual Absent Present ECOLOGY Ecosystem- composed of all living and non living things in a particular location (the environment) Biotic factors-living things in an environment Abiotic factors- non living things in an environment Food web- a chain of organisms that feed on one another in an environment Producers: make their own food plants eat plants eat plants Primary consumers: herbivores eat animals Tertiary consumers: omnivores eat animals eat animals Secondary consumers: carnivores Scavengers and Decomposers feed on dead things Niche- role in an ecosystem, includes all aspects of an organism’s lifestyle, but especially how it obtains food Habitat- the physical surroundings in which an organism lives Habitats can change over time. Primary succession- life has never been in the area; examples volcanic rocks, new volcanic islands, area of bare rock after a landslide -pioneer community - first group of organisms to settle an area - hardy group - usually lichens which can survive with no soil o - this group creates soil and accumulates soil -second group to move in is the grasses - need less soil than shrubs and trees - help create and accumulate more soil -Third group are the shrubs and cedar trees -Finally the climax community of deciduous trees moves in Climax community- very stable community that does not change much unless a natural or manmade disaster strikes Secondary succession- succession that occurs after a natural disaster, usually does not take as long as primary succession Even ponds will eventually become forests. Populations and changes Biological species- have genetic makeup that is similar enough for them to produce offspring which are able to produce a second generation of offspring Population- all the members of a species living in a specific area Geographic isolation- when members of a species become separated due to changes in their environment this can cause the members of the species to change over time to the point that they are no longer the same species Biome Region Flora Fauna Characteristics Polar North and Moss and Polar bears, Permafrost South poles Lichen penguins Tundra Arctic/Antarctic Grass and Reindeer, Thin soil, areas wildflowers caribou permafrost Taiga Northern Stunted Wolves, Long cold forests conifers rabbits winters Deciduous NE/mid-eastern Deciduous Deer, birds, Moderate forest US and trees small animals precipitation, Western warm Europe summers, cold winters Grasslands Mid-Western Grasses Prairie dogs, Hot summers, US; Eurasia, ferrets, snakes cold winters, Africa Desert Western US, North and SW Africa Cacti, succulents Jackrabbits, lizards, rats, snakes Tropical rainforest South America Diverse plants Monkeys, leopards Temperate rainforest NW US Giant Conifers Bear, deer, birds Effects of Humans on the Environment Cause Build up of carbon dioxide in the atmosphere Use of fossil fuels, build up of sulfur oxides and nitrogen oxides in the atmosphere Everyday human activities Release of heated water into rivers and streams rainfall unpredictable Dry, very little rainfall, extremely hot in the day, extremely cold at night High temperatures and rainfall Moist soil, high rainfall, moderate temperatures Effect Greenhouse effect which in turn causes global warming Photochemical smog which damages plant tissues Acid rain which changes the pH of lakes and rivers and kills fish in those waters Build up of pollutants or undesired impurities in the environment Thermopollution causes the death of many organisms Biodegradable- organic, can be broken down by living things in the environment Non-Biodegradable- cannot be broken down by living things in the environment Deforestation- erosion and habitat loss caused by cutting or burning down large areas of forest - can be prevented by planting new forests and recycling wood products Bioremediation- using microorganisms to decompose hazardous wastes Three ways to help the environment Reduce Reuse Recycle