Derivation of Type II Pneumocytes from Murine Embryonic Stem Cells: In Vivo Role in Lung Regeneration and Repair David Fernandes Braga Malta Dissertação para a obtenção do Grau de Mestre em Engenharia Biológica Júri Presidente: Orientadores: Vogais: Professor Luís Fonseca Professor Joaquim Sampaio Cabral Doutora Sile Lane (SCRM/ICL) Doutora Cláudia Lobato da Silva Doutora Raquel Gonçalves (IBMC/INEB) Setembro 2007 i Acknowledgments Imperial College of London I would like to thank my supervisor, Dr. Sile Lane, for teaching, guiding and helping me throughout the course of my project and for her help with the manuscript. I am thankful to Dr. Anne Bishop for allowing me to join her group. I would also like to thank Dr. Helen Rippon for letting me participate in her project. The contributions of the following people in this project are also gratefully acknowledged: Dr. Siti Ismail for her help with the day-to-day work in the laboratory. Dr. Masao Takata for providing the LPS-induced lung injury mice and performing the in vivo experiments. Niga Nawroly for her expertise with the FACS machine. Instituto Superior Técnico I would like to thank Professor Joaquim Cabral for opening the doors of his laboratory where I was trained and for helping whenever I needed. I am thankful to Dr. Cláudia Lobato for introducing me and sharing her passion for scientific research and for all her help with the manuscript. I would also like to thank Dr. Margarida Diogo for teaching me almost everything I know of murine ESC culture and helping me revising the manuscript. ii Abstract Lung diseases are estimated to be the third leading cause of death by 2020. For many patients the only available clinical treatment is transplantation, but the number of available organs is far surpassed by the demand. The possibility of an alternative means of lung regeneration and repair would be of enormous clinical impact. Embryonic stem cells (ESCs) are a potential source for cell therapy and tissue engineering strategies and, for respiratory disease, distal gas exchange epithelium is an obvious target. The present study investigates the potential of murine ESCs to provide an unlimited source of distal lung progenitor cells and evaluates for the first time their in vivo role in lung regeneration and repair. Murine ESC cultures were enriched for mature distal airway epithelial cells and their progenitors using a well-established protocol. This population was labelled using fluorescent markers and delivered to healthy and lung injured mice via tail vein injection. Mice were culled at various time points and implanted cells were traced. Labelled cells were present in the lungs of both healthy and injured mice up to 5 days after implantation. Overall, the presented studies provide evidence for the potential of ESC-derived lung progenitors to home to the lung in what is an important first step towards stem cell-based lung therapies. Lung; Tissue Engineering; Stem Cells; Regenerative Medicine iii Resumo As doenças pulmonares resultam potencialmente em taxas de mortalidade elevadas, estimando-se que em 2020 estas possam constituir a terceira maior causa de morte nos países desenvolvidos. Esta elevada taxa de mortalidade resulta de o único tratamento disponível para a maioria destas doenças, ser o transplante e de o número de órgãos disponíveis ser claramente insuficiente. Assim, a possibilidade de um método alternativo de regeneração do tecido pulmonar teria indubitavelmente um enorme impacto ao nível clínico. As células estaminais embrionárias (CEE) assumem um papel central na área da medicina regenerativa, pois representam uma fonte inesgotável de células para terapia celular e engenharia de tecidos. No caso do pulmão, o objectivo central é a obtenção do epitélio alveolar responsável pela troca gasosa que aí decorre. Neste âmbito, este estudo investiga o potencial das CEE como fonte de células progenitoras do pulmão e avalia o seu potencial in vivo na regeneração do tecido pulmonar. Para atingir o objectivo proposto, as células progenitoras do pulmão foram derivadas a partir de CEE de ratinho com base num protocolo previamente estabelecido. Esta população foi então marcada com uma sonda fluorescente e administrada a ratos saudáveis e doentes através de injecção na veia da cauda, sendo os ratos sacrificados após diferentes intervalos de tempo. Verificou-se que as células administradas estavam presentes nos pulmões dos animais até cinco dias após a implantação. Este resultado constitui a primeira evidência da capacidade de células progenitoras do pulmão derivadas a partir de CEE para participar in vivo na regeneração do pulmão. Pulmão; Engenharia de Tecidos; Células Estaminais; Medicina Regenerativa iv Table of Contents Acknowledgments ......................................................................................................................ii Abstract...................................................................................................................................... iii Resumo .....................................................................................................................................iv List of Abbreviations ................................................................................................................. vii List of Figures ............................................................................................................................ix List of Tables ............................................................................................................................ xii 1 Introduction ....................................................................................................................... 1 1.1 Aims of the Study and Experimental Approach............................................................ 2 1.2 Lung.............................................................................................................................. 3 1.2.1 1.2.2 Lung Development .......................................................................................... 3 Lung Biology.................................................................................................... 3 1.3 Embryonic Stem Cells .................................................................................................. 5 1.4 Lung Injury and Repair ................................................................................................. 6 1.4.1 1.4.2 1.4.3 1.4.4 1.5 Tissue Engineering: Creating Lung Tissue Ex-Vivo ................................................... 12 1.5.1 1.5.2 2 2.1 Derivation of Type II Pneumocytes from Murine ESCs................................. 12 Implantation of Murine ESC-Derived Lung Cell Progenitors ......................... 13 Materials and Methods.................................................................................................... 15 Cell Culture ................................................................................................................. 15 2.1.1 2.1.2 2.2 Lung Endogenous Stem Cells......................................................................... 6 Tracheal and Bronchial Stem Cells ................................................................. 6 Bronchiolar Stem Cells .................................................................................... 7 Alveolar Stem Cells ......................................................................................... 7 Lung Exogenous Stem Cells ........................................................................... 8 Bone Marrow–Derived Cells............................................................................ 8 Side Population Cells .................................................................................... 10 Stem Cells and Inflammatory Response ....................................................... 10 Lung Injury Models ........................................................................................ 10 Maintenance of Murine ESCs........................................................................ 15 Differentiation of Murine ESCs into Lung Cell Progenitors ........................... 15 Cell Culture Characterization...................................................................................... 16 2.2.1 Flow Cytometry.............................................................................................. 16 2.2.2 Reverse Transcription-Polymerase Chain Reaction ..................................... 16 2.2.3 Immunocytochemical Characterization of the Murine ESC-Derived Lung Cell Progenitors ................................................................................................................. 17 2.2.4 Microscopy .................................................................................................... 18 2.3 Cell Implantation......................................................................................................... 19 2.3.1 2.3.2 2.3.3 Labelling of Differentiated Cells..................................................................... 19 In vivo Studies ............................................................................................... 19 Tissue Recovery and Histological Analysis................................................... 20 Harvesting Tissues from Implanted Mice ...................................................... 20 v 2.3.4 3 Tissue Freezing ............................................................................................. 20 Cryostat Sectioning ....................................................................................... 20 Microscopy .................................................................................................... 20 Fluorescent In Situ Hybridization (FISH) for Y chromosome ........................ 20 Results ............................................................................................................................ 22 3.1 Differentiation and Characterization of Murine ESCs................................................. 22 3.2 Implantation of Murine ESC-Derived Lung Cell Progenitors ...................................... 28 Healthy Mice.................................................................................................. 33 LPS Injured Mice ........................................................................................... 36 Homing of ESC-Derived Lung Cell Progenitors ............................................ 40 Y-chromosome FISH: Preliminary Studies.................................................... 43 Electron Microscopy: Preliminary Studies ..................................................... 44 4 Discussion....................................................................................................................... 45 4.1 Differentiation and Characterization of Murine ESCs................................................. 46 4.2 Implantation of Murine ESC-Derived Lung Cell Progenitors ...................................... 47 4.2.1 4.2.2 4.2.3 Homing of Murine ESC-Derived Lung Cell Progenitors ................................ 48 Overtime Maintenance of Murine ESC-Derived Lung Cell Progenitors ........ 49 Homing of Murine ESC-Derived Lung Cell Progenitors and Injury ............... 50 5 Conclusions and Future Trends...................................................................................... 52 6 References...................................................................................................................... 54 vi List of Abbreviations 3D Three-dimensional ALI Acute Lung Injury AQP5 Aquaporin 5 ARDS Adult Respiratory Distress Syndrome ATI Alveolar Type I Pneumocytes ATII Alveolar Type II Pneumocytes BASCs BronchioAlveolar Stem Cells BM Bone Marrow BrdU Bromodeoxyuridine CCSP Clara Cell Secretory Protein cDNA Complementary Deoxyribonucleic Acid CEE Células Estaminais Embrionárias CFDA SE CarboxyFluorescein DiaAcetate Succinimidyl Ester Cfrt- Conformal Radiotherapy CFSE CarboxyFluorescein Succininidyl Ester COPD Chronic Obstructive Pulmonary Disease DAPI 4,6 diamidino-2-phenylindole dATP DeoxyAdenine Triphosphate dCTP DeoxyCytosine Triphosphate dGTP DeoxyGuanine Triphosphate DMEM Dulbecco’s Modified Eagle’s Medium DNA Deoxyribonucleic Acid dUTP DeoxyUridine Triphosphate EBs Embryoid Bodies eGFP Enhanced Green Fluorescent Protein ESCs Embryonic Stem Cells FBS Foetal Bovine Serum FISH Fluorescent In Situ Hybridization FITC Fluorescein IsoThioCyanate GFP Green Fluorescent Protein ICC Immunocytochemistry ICL Imperial College of London IL-1 Interleukin-1 IL-1RN Interleukin-1 Receptor Antagonist KOSR KnockOut Serum Replacement LIF Leukaemia Inhibitory Factor LPS LypoPolySaccahride vii LRCs Label-Retaining Cells MAPCs Multipotent Adult Progenitor Cells mESCs Murine Embryonic Stem Cells MSCs Mesenchymal Stem Cells NHS National Health Service OCT Optimal Cutting Temperature PBS Phosphate Buffered Saline RNA Ribonucleic Acid rpm Rotations per Minute RT-PCR Reverse-Transcription Polymerase Chain Reaction SCRM Stem Cells and Regenerative Medicine SP Side Population SPC Surfactant Protein C TNF-α Tumour Necrosis Factor α UK United Kingdom US United States viii List of Figures Figure 1 – The pulmonary tree. Stem/progenitor cell niches in the lung. Noncilliated cells, basal cells, Clara cells and type II pneumocytes are stem cells in their local epithelial niches (Adapted from 4). ....................................................................................................................... 4 Figure 2 – Foxa2 expression in day 7 EBs. ESCs committed to an endoderm lineage at day 7 were detected by fluorescent ICC for foxa2. Foxa2 expression was detected mostly in the peripheral area of the EB. A – Foxa2 (x20). B – Merging of Foxa2 (green) and DAPI (blue, x20). C – Foxa2 (x40). D – Merging of Foxa2 (green) and DAPI (blue, x40)............................ 1 Figure 3 – Sox17 expression in day 7 EBs. ESCs committed to an endoderm lineage at day 7 EBs were detected by fluorescent ICC for Sox17. Sox17 expression was detected mostly in the peripheral area of the EB. A – Sox17 (x20). B – Merged Sox17 (green) and DAPI (blue) (x20). C – Sox17 (x40). D – Merged Sox17 (green) and DAPI (blue) (x40).............................. 1 Figure 4 – SPCeGFP expression in adherent EBs at day 21. ESCs committed to a distal lung lineage were detected by eGFP expression at day 21. The images represent the overlapping of transmitted light and fluorescent images. SPCeGFP expression occurs mostly at peripheral areas of the attached EBs (x40). ............................................................................................... 1 Figure 5 – FACS results from 2 experiments. The mixed population of murine ESCs-derived lung cells progenitors was sorted by FACS for eGFP expression. The proportion of SPCeGFP positive cells was of approximately 1%. A, D – Distribution of unsorted cells. B, E – Percentage of SPCeGFP positive and negative cells. C, F – Distribution of cell number with fluorescence intensity. ............................................................................................................... 1 Figure 6 – RT-PCR results. The day 25 mixed population of ESCs-derived lung cell progenitors sorted by FACS was analysed for the expression of lung specific, endoderm, mesoderm, ectoderm, hematopoietic and pluripotency markers by PCR. Lung specific markers SPC, CCSP and TTF-1 are restricted to SPCeGFP positive cells. (Data generously provided by Doctor Helen Rippon) ............................................................................................ 1 Figure 7 - The expression of SPC in SPCeGFP positive cells. SPC is a surfactant protein assembled in the cytoplasm. SPC (red) and nuclei (DAPI blue). A, C – SPC positive cells. B, D – Overlapping of blue light, green light and UV fluorescence. (A and B x20, C and D x40). 1 Figure 8 - The expression of AQP5 in SPCeGFP positive cells. AQP5 is a membrane transporter present in ATI. AQP5 (red) and nuclei (DAPI blue). A, C – AQP5 positive cells. B, D – Overlapping of blue light, green light and UV fluorescence. (A and B x20, C and D x40). 1 Figure 9 – Experimental layout of the implantation of murine ESC-Derived Lung Cell Progenitors. ESCs were driven toward a distal lung cell lineage by culture with a combination of activin A and noggin. The population of cells was labelled then injected into both healthy and LPS injured mice. Mice were sacrificed at different times post-implantation and organs harvested for analysis.............................................................................................................. 28 Figure 10 – Iron oxide cell labelling. Prior to implantation the population of lung cell progenitors was labelled with a green fluorescent cell tracker protein, CFSE, and with iron oxide nanoparticles with a FITC tag (green FITC tag and blue nuclei (DAPI)). A and B x40. C and D x60. ................................................................................................................................. 1 Figure 11 – Representation of the changes in body weight of mice between implantation and cull. Comparison of healthy and LPS injured mice. Control mice received only saline solution. Error bars represent standard deviation from the average value............................................ 30 Figure 12 - Representation of the changes in body weight of healthy mice between implantation and cull. Comparison of the different types of labelled cells administered to healthy mice. Control mice received saline solution only. Error bars represent standard deviation from the average value. ........................................................................................... 31 Figure 13 – Lung sections of healthy mice culled 1 day after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 1 day after implantation ix was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the labelled cells (A, B, C, D and G), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei, DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. .... 1 Figure 14 – Lung sections of healthy mice culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. .................................................................................................... 1 Figure 15 - Lung sections of healthy mice culled 5 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 5 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20. ............................................................................................... 1 Figure 16 – Lung sections of LPS injured (6 hours pre-implantation) mice culled 1 day after cell implantation. The presence of labelled murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours before implantation) mice 1 day after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10 G, H and I x20. ................................................................................................................................... 1 Figure 17 – Lung sections of LPS injured (6 hours pre-implantation) mice culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours before implantation) mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. ................................................................................................................................... 1 Figure 18 - Lung sections of LPS injured (6 hours pre-implantation) mice culled 5 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours prior to implantation) mice 5 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20. ............................................................................................................................... 1 Figure 19 - Lung sections of mice LPS injured 24 hours pre-implantation culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20................................. 1 Figure 20 – Intestine sections. The presence of murine ESCs-derived lung cell progenitors in the intestine of the implanted mice was investigated by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. ............................................................................... 1 Figure 21 – Liver sections. The presence of murine ESCs-derived lung cell progenitors in the liver of the implanted mice was investigated by fluorescence microscopy. Sections were x observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. ........................................................................................... 1 Figure 22 – Spleen sections. The presence of murine ESCs-derived lung cell progenitors in the spleen of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4 magnification. D, E and F x 10...................................................................... 1 Figure 23 –Kidney sections. The presence of murine ESCs-derived lung cell progenitors in the kidney of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. ............................................................................................ 1 Figure 24 – Heart sections. The presence of murine ESCs-derived lung cell progenitors in the heart of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. ........................................................................................... 1 Figure 25 – Ovary sections. The presence of murine ESCs-derived lung cell progenitors in the ovary of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. ............................................................................................ 1 Figure 26 – Brain sections. The presence of murine ESCs-derived lung cell progenitors in the brain of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. ............................................................................................ 1 Figure 27 - Y-FISH preliminary study. The presence of implanted murine ESC-derived lung cell progenitors in the lungs of the implanted mice was assessed by Y-FISH. Sections were observed under blue light fluorescence for the presence of the cells (A), the presence of YFISH positive cells assessed under green light fluorescence (B) and both images and UV fluorescence (nuclei DAPI) were overlapped (C). A, B and C x20. (White arrow – Green fluorescent-labelled cell; Grey arrow – Y-FISH labelled cell) .................................................... 1 Figure 28 – Electron microscopy preliminary study. The presence of implanted murine ESCderived lung cell progenitors in the lungs of the implanted mice was assessed by electron microscopy. Lung samples were processed and analysed for the presence of iron oxide nanoparticles (White arrow). A - x34000. B - x46000 . C - x64000........................................... 1 xi List of Tables Table 1 - Reverse transcription-polymerase chain reaction primers....................................... 17 Table 2 – Summary of the antibodies used in ICC.................................................................. 18 Table 3 – Summary of body weights for the healthy mice. Mice received CFSE and iron oxide (Fe2O3) labelled cells. Controls received saline solution only. (*reduced dose 50%). ............ 31 Table 4 - Summary of body weights for LPS injured mice. Mice received CFSE and iron oxide (Fe2O3) labelled cells. Controls received only saline solution. (*reduced dose 50%). ............ 32 xii 1 Introduction Lung is the vital organ that ensures, in animals, the ability to breathe. Breathing is essential to life and lung damage equals, in most cases, severe illness or death. Although the lung is exposed to several types of external aggressions, it has slow turnover rates. Therefore, an efficient way to repair, regenerate or even create lung would have an enormous clinical impact and would be lifesaving in many cases. Respiratory diseases are estimated to become the third leading cause of death in the world by 2020 1. In fact, in the United Kingdom (UK), one in every five deaths is related to lung damage and every year the National Health Service (NHS) spends over £6 billion on respiratory diseases 2 . In the United States (US), the costs associated with Chronic Obstructive Lung Disease (COPD) for the next 20 years are estimated to be over $800 billion 3 . At present, for many lung diseases the only available clinical treatment is transplantation. However, the number of available organs is far surpassed by the demand. Tissue engineering aspires to fill this gap by aiming to restore normal cellular architecture and function where tissues have been compromised by injury or disease. Unfortunately, lung is a particularly difficult target as it combines structural complexity, cellular diversity and slow turnover rates. Nonetheless, recent advances are taking us closer to achieving targeted lung regeneration. These advances include the clarification of the events that take place during lung embryonic development and the discovery of regenerative pathways in adult lung, which were previously unknown. In particular, stem cell research has moved to the forefront of medical research in the last decade, with some of the most crucial discoveries in this area 4. Stem cells are the first line of intrinsic pathways for tissue regeneration and repair representing a pivotal target to mediate in vivo repair. The selective activation of stem cell pools could allow the manipulation and enhancement of the body’s innate regenerative capability. On the other hand, implantation of ex-vivo created pulmonary epithelium, derived from stem cells, could represent the treatment for more extensive lung damage. 1 1.1 Aims of the Study and Experimental Approach The necessity to develop alternative means to repair damaged lung has urged the efforts to create lung epithelium. In this context, this study aims to evaluate the potential of murine embryonic stem cells (ESCs)-derived alveolar type II pneumocytes to home and engraft to healthy and damaged lungs. This could represent an important step in tissue engineering of the lung, since it will inevitably require the production of a stable source of alveolar tissue, the gas exchange unit of the lung. The alveoli are responsible for the gas exchange between blood and air being the central unit of the lung. These extremities of a long branching tree are lined by alveolar type I and II pneumocytes (ATI and ATII, respectively). The first are responsible for the gas exchange itself, whilst the second produce the surfactant proteins that allow maintaining alveolar structure and lowering surface tension. ATII are also able to differentiate into ATI thus representing a stem cell niche in the alveoli. This capability means that delivering ATII to lungs would allow replacing the two cell types that line the alveoli, which could represent an effective mechanism to reverse lung damage. An ATII cell enriched population was derived following a modification of the three step protocol published by Bishop’s group in 2006 5 . The cell line used (E14-Tg2α) was transfected with a SPCeGFP construction, meaning that when surfactant protein C (SPC) is expressed, so is enhanced green fluorescent protein (eGFP). Since SPC is an ATII specific protein, one can conclude that eGFP positive cells have become ATII. The obtained cell population enriched for ATII was injected into C57BI/6 female mice via the tail vein. Mice were killed at different time points post-implantation and organs harvested for analysis. The study was carried out using both healthy and LypoPolySaccahride (LPS) injured mice (mouse lungs were damaged by intratracheal inhalation of LPS toxin thus simulating a lung inflammation model). Homing and engraftment of cells into the lungs was evaluated by fluorescence microscopy. Implanted cells are traceable by the presence of a green fluorescent label (eGFP and Carboxyfluorescein Succinimidyl Ester (CFSE) positive cells), by co-localisation of specific immunohistochemical markers with the green label and by electron microscopy, as cells were also labelled with iron particles. On the other hand, all the remaining organs were screened in order to access homing of the derived population of cells to the lungs. Furthermore, this study aimed at the fully characterization of the ATII enriched population using specific lung, endothelial cell and differentiation markers and the evaluation of the type and potential function of the engrafted cells in healthy and damaged lung tissue. 2 1.2 Lung 1.2.1 Lung Development In animals, the normal adult lung has its origin in the primitive gut. It develops from a diverticulum of the ventral wall of the primitive oesophagus within the fourth to fifth week of gestation (humans). This stage marks the beginning of the dichotomous branching of the endoderm into the splanchnic mesenchyme that surrounds it. This process follows a highly ordered and repeated pattern of bud outgrowing and divisions of the terminal units, known as branching morphogenesis 6. Branching morphogenesis gives origin to the pulmonary tree and defines the proximal-distal axis of the lung. In humans, the process is divided into four different phases: embryonic (0-5 weeks of gestation), glandular (5-16 weeks), canalicular (16-26 weeks) and saccular (26 weeks to term) 7. Throughout this complex process, mature lung is formed having distinct anatomical regions lined by different types of epithelial cells. This complex architectural structure of different cells that interact during normal function make lung a very difficult target for regenerative medicine (reviewed in 8). 1.2.2 Lung Biology The pulmonary tree can be divided into three distinct anatomical regions, characterized by different types of epithelial cells (Figure 1). In the mature lung, the trachea and major bronchi are lined by pseudostratified epithelium. In the proximal airways, the predominant phenotypes are ciliated and mucous secretory (or goblet) cells, with the more infrequent neuroendocrine cells and the less well-differentiated basal cells lying in a basal position. A different type of cells possessing a different phenotype, known as Clara cells (nonciliated), line the bronchioles. Clara cells play an important role in detoxifying inhaled pollutants and secrete Clara cell secretory protein (CCSP). In their turn, alveoli are lined by flattened squamous ATI pneumocytes and cuboidal ATII cells. The ATI is the cell type across which gas exchange occurs. This capacity is enhanced by its long and thin cytoplasmic extensions that represent the smallest barrier to gas diffusion possible whilst maintaining cellular and alveolar epithelial integrity. ATI occupy the majority of the surface area of the 2 normal adult lung (~70 m ). ATII are more numerous than ATI, nevertheless they represent only around 5% of alveolar surface area, due to their cuboidal shape. These cells are crucial for maintaining alveolar homeostasis, clearing the alveolar airspace of edema and secreting pulmonary surfactant to lower surface tension and prevent airway collapse, thus facilitating gas exchange. Another cell type, which populates the lungs, are the neuroendocrine cells that first appear around 8 weeks of gestation. These cells are relatively common in the developing lung, but form less than 1 % of epithelial cells in adult lung (reviewed in 8,4). 3 Figure 1 – The pulmonary tree. Stem/progenitor cell niches in the lung. Noncilliated cells, basal cells, Clara cells and type II pneumocytes are stem 4 cells in their local epithelial niches (Adapted from ). Not only is lung epithelial architecture complex, but its vasculature differs from that of systemic circulation too. In the lungs, the endothelial cell layer is continuous, bathed on one side by blood and by interstitial fluid on the other. Lung vasculature is relatively regular throughout all its extension, with only small differences associated with the function of each region. While alveolar endothelial cells have an avesicular zone, whose basal lamina fuses with that of ATI cells to form the air-blood barrier, venous endothelial cells are thinner, polygonal and have fewer organelles. The space between the epithelium lining the air space, the vascular endothelium and the pleural mesothelium is known as the interstitium. The interstitium in formed by a spectrum of cell types, ranging from smooth muscle cells to fibroblasts and immune cells. These cells are responsible for the formation of the extracellular matrix that supports the structural integrity of the lung whilst allowing plastic deformation 4 during respiration (reviewed in ). 4 1.3 Embryonic Stem Cells The prevalence of lung diseases and the lack of an effective clinical treatment other than a transplant for the majority of lung injuries have driven the scientific community from the classical chemical drug discovery towards new approaches in lung repair and regeneration. The perspective of tissue-engineered lungs that would allow facing the lack of donor organs for transplant is still far from being reality and stem cell research assumed the lead of scientific research concerning lung regeneration and repair. Stem cell definition is still a source of wide debate within the scientific community. Nonetheless, it is generally accepted that clonogenicity, ability to self-renew and multilineage differentiation potential are sufficient conditions for this definition 9-13 . Among stem cells in general, embryonic stem cells (ESCs) are of particular interest due to their pluripotency and high proliferative capacity, making them a potential unlimited source of cells to tissue engineering. ESCs are pluripotent cells derived from the inner cell mass of the blastocyst, an early stage of embryonic development and in 1998 from humans 14,15 . Their derivation from mice was first reported in 1981 16-18 . These cells can be cultured for long periods while maintaining a normal karyotype and retain the ability to differentiate into a wide variety of tissue specific cells derived from all three germ layers: ectoderm, endoderm and mesoderm 19 . The undifferentiated state of ESCs can be maintained by culturing them on a feeder layer of murine embryonic fibroblasts 20 or in the presence of the cytokine leukaemia inhibitor factor 19,21 . On the other hand, the most common method of ESCs differentiation is the spontaneous formation of three-dimensional (3D) spherical structures in suspension, the so called embryoid bodies (EBs), which contain derivates from all three germ layers. The production of alveolar tissue from stem cells would be a major step towards lung regeneration and repair. However, despite their potential, there are still many biological questions regarding stem cells to be answered and manipulation of ESCs for tissue engineering is subject to debate in ethical, political and religious contexts. 5 1.4 Lung Injury and Repair In the lung, subsets of stem cells have been identified and characterized. These subsets have been studied as local stem cell niches that are able to react locally to injury and restore the normal physiology of the lungs. On the other hand, recent descriptions have changed the perception of organ regeneration, as tissues have been shown to be regenerated by circulating stem cells. These cells appear to detect tissue injury signals being, mobilized towards injury areas where they engraft and promote regeneration (reviewed in 4). 1.4.1 Lung Endogenous Stem Cells The complex architecture of the lung is also present in what is believed to be its specific stem cells niches. Basal, Clara and ATII cells are stem cells for their local niches (Figure 1). This fact is of particular interest if a comparison between lung and gut is made. Although both have their origin in endoderm, there is only one stem cell type described for gut. These cells undergo a cycle of differentiation in the crypt, changing from one cell precursor type to the other and covering all the gut specific cell types. In contrast, in the lungs, there are several types of stem cells. This diversity allows lungs to respond quickly and specifically to lung injury as every lung niche has its specific and local cell source avoiding mobilization and long differentiation cycles. Tracheal and Bronchial Stem Cells In both trachea and bronchi, it is widely accepted that basal and mucous secretory cells are stem cells. The first evidence that basal cells could be stem cells dates from 40 years ago, when they were shown to uptake [3H]-thymidine, which was later found in ciliated and goblet cells 13 . Moreover, they accumulate at injury sites 22 and their histological appearance suggests an intermediate phenotype, having characteristics both from ciliated and goblet cells 23 . In vitro it was shown that these cells are able to generate all the major epithelial phenotypes found in the trachea (basal, ciliated, goblet and granular secretory cells) 24-26 . The evidence that mucous secretory cells are stem cells is not so abundant. Nevertheless, Bromodeoxyuridine (BrdU) label-retaining cells are believed to be stem cells 27 and this type of cells has been found in gland ducts of the upper trachea following injury 28. 6 Bronchiolar Stem Cells Clara cells (firstly described in 1937 29 ) have been shown to be progenitors of themselves and of ciliated cells in the bronchioles 30-33. This notion has been modified since it was established that a subset of Clara cells fulfils the criteria of niche-specific stem cells. Pools of stem cells that produce CCSP were discovered, but these are not typical Clara cells, as they show resistance to pollutants such as naphthalene neuroepithelial bodies 37-39 34-40 . These cells reside in and at the broncho-alveolar duct junctions 40 and ablation of this population eliminates bronchiolar renewal completely. A population of cells expressing markers for both Clara cells and alveolar epithelium has recently been identified as a stem cell population for Clara cells and ATII cells 41 and are known as bronchioalveolar stem cells (BASCs). In contrast to the many descriptions of lung epithelial stem cells, lung mesenchymal stem cells (MSCs) have only recently been identified 42 . These bronchial cells were first described as having fibroblast-like morphology and exhibiting the phenotype and multilineage differentiation potential characteristic of MSCs, although the authors were unable to show that these cells were lung endogenous cells. More recently, another group proved that these cells were indeed lung endogenous 43 . MSCs were isolated from adult respiratory tracts after sex-mismatched transplants and it was found that these MSCs were donor derived and thus resident in the lung 43. Alveolar Stem Cells More than 50 years ago, ATII cells were shown to proliferate following injury 44. These cells are able to restore the alveolar epithelium following generalized damage by oxidants by dividing to generate new ATII and differentiating to replace the ATI (mostly destroyed following injury) 45-50 . ATII cells also respond, by proliferating, to selective damage by butylated hydroxytoluene 51 and bleomycin 52,53. Inflammatory infiltration, as a consequence of particle inhalation, has a similar effect on these cells 54. In fact, recent work suggests that two different populations of ATII cells may exist 55 . The new population of cells shows an E-cadherin negative phenotype and a high telomerase activity and is described as fitting closer to the stem cell definition 55. 7 1.4.2 Lung Exogenous Stem Cells The severity of an injury may induce the recruitment of stem cells from other sources to supplement the endogenous repair mechanisms. Lung injury has been shown to trigger the mobilization of bone marrow (BM)-derived stem cells. Recently, another population of cells, the so-called side population (SP) cells has been identified has a potential stem cell source for lungs. Bone Marrow–Derived Cells Adult BM has been shown to contain two populations of cells that have the ability to self-renew and differentiate into hematopoietic and mesenchymal cell lineages 56 . More interestingly, BM-derived MSC have been shown to retain the ability to differentiate in vitro not only into cells of the mesenchymal lineages, such as adipocytes 56, osteocytes 57,58, myocytes 59 , and cardiomyocytes 60 , but also towards the ectodermal lineage lineage, such as hepatocytes 62-65 and renal parenchymal cells 61 and the endodermal 66 . These facts prove that there exists a population of stem cells in the BM of the adult organism that retains pluripotency throughout all developmental process. Supporting this fact, a population of multipotent adult progenitor cells (MAPCs) that has been isolated from murine BM has been shown to differentiate in vitro at a single cell level into cells of all three germ layers 67. The mechanism of recruitment of BM stem cells to repair a certain tissue is not known, although engraftment seems to be dependent or at least enhanced by injury 68-74 . In fact, there is a considerable controversy about whether or not MAPCs are able to migrate and engraft in tissues and the effect of variables such as starting cell population or the degree of injury, if any, are unclear. Most of the studies regarding homing and engraftment of BM-derived cells to lungs rely on co-localization of BM specific markers with those of the lungs by microscopy. However, recent studies have shown, by confocal microscopy, that these findings are in fact a consequence of separate overlapping cells or autofluorescence, and thus not genuine co-localization of markers 75,76. BM-derived cells have been identified in the pulmonary epithelium of recipient mice and the rate of engraftment was positively correlated with injury 68-83 . One of these studies suggested the existence of a long-term renewal mechanism by reporting the presence of marrow-derived cells 11 months after transplant 78 . Another study showed the importance of the potential BM-derived cells mediated repair as it demonstrated that the presence of healthy BM was essential to full recovery following LPS injury 81 . Moreover, MSCs isolated from BM engraft in distal airways and the degree of engraftment is enhanced by bleomycin injury 70 . 8 Radiation induces the engraftment of circulating cells as ATI and fibroblast-like interstitial cells 72 . The accuracy of the previous reports was first doubted by Beckett and co-workers 83 . They reported that, following BM transplantation, the engrafted cells in lung were almost all donor-derived leucocytes. Moreover, they showed that the level of injury or even its absence did not influence engraftment. Another group reported that the rate of engraftment of marrow-derived cells into lungs of conformal radiotherapy knockout (Cfrt-) mice was so low that it was impossible to characterize those cells 75 . Furthermore, Bruscia and colleagues were unable to find relevant BM-derived cell engraftment in lungs of newborn mice when transplanted just after birth 84 . On the other hand, the need of a threshold of injury for BM-derived cells to engraft in the lungs was demonstrated by Herzog and co-workers Another interesting fact is that some cells seem to be disease-causing as protective 72 75 . and others emerge 69 . In fact, the recruitment of circulating cells to injury sites may contribute to undesired fibrosis in the alveolar wall as circulating MSCs will also be mobilised 72 . All this controversy emphasises the necessity of standardization of the protocols for injury and transplantation across laboratories, in order to evaluate truly the potential of BM cells for lung regeneration and repair. Even disregarding this controversy and assuming that BM-derived cells do engraft into lung one question is still to be answered: what is the mechanism underling engraftment? One possible mechanism is cell fusion where marrow-derived cells fuse with lung epithelial cells assuming lung phenotype. Cell fusion has been demonstrated both in vitro vivo in the liver and heart (hepatocytes and cardiomyocytes, respectively) 85-87 and in 87-94 , but tests on the pulmonary epithelium are inconclusive. Although in vitro tests clearly showed fusion with BM cells in epithelial repair vivo tests did not confirm this result and co-workers 78,79 95 , in . Recently, another possibility was raised by Aliotta 96 . They hypothesize that injured lung is capable of inducing epigenetic modifications of marrow cells, thus influencing them to assume phenotypic characteristics of lung cells. These epigenetic changes are induced by RNA-filled microvesicles that are produced by injured lung tissue and enter whole BM cells in co-culture experiments. Moreover, these cells have a greater propensity to produce ATII after transplantation into irradiated mice. This report represents an important breakthrough and reveals a new strategy for the direct repair of injured tissue 96. Studies on human lung have either found no engraftment of BM-derived cells into lung or observed that engraftment occurs at very low rates 97-102 . These studies also rely on co-localization of histological markers, which, along with the poor quality of available human lung samples, plagued these studies with technical problems. 9 Side Population Cells Side population cells have a unique flow cytometry profile when stained with the DNA dye Hoescht 33342. SP cells bud from the main Hoescht-stained population probably because of the expression of protein transporters such as bcrp1 which are capable of effluxing this dye against the concentration gradient. These cells were first identified in the BM as being highly enriched for hematopoietic stem cell activity 103 , but recently these cells have been identified in several tissues and seem to act as tissue-specific stem cells these cells have been identified in both proximal and distal lung 107-109 104-106 . Indeed, . Although they were thought to be tissue specific stem cells, recent work has shown that lung-specific SP cells have in fact a hematopoietic origin in spite of being phenotypicaly different from BM SP cells 109 . 1.4.3 Stem Cells and Inflammatory Response Stem cells have always been exploited as vectors to repair or regenerate injured tissue more precisely as a source of fresh cells that would replace the damaged endogenous ones. Although several studies have been published, the actual potential of these cells has not been fully accessed. Interestingly, recent reports suggest that the actual role of stem cells in regeneration is not the repopulation of tissue, but a modulation of the inflammatory response of tissue to aggressions 110,111 . Following the observation that implanted MSCs ameliorate lung injury after exposure to bleomycin, but only if administrated at the time of injury, Ortiz and colleagues 110 studied the eventual production of soluble factors that would modulate inflammation. They showed that the administered MSCs secrete high levels of IL1RN. This protein is responsible, both in vitro and in vivo, for the protection of injured tissue after bleomycin injury by blocking the production and/or the activity of Tumour Necrosis factor (TNF) α and Interleukin-1 α (predominant proinflammatory cytokines in lung tissue). In what seems to be a paradox, the authors reported that endogenous IL1RN produced in the inflamed lung was not as effective as MSCs in modulating the inflammatory response, a fact that could be explained by the different secretion times: while exogenous MSCs secrete IL1RN from the beginning of the inflammation response, endogenous ones start secreting later in the process. 1.4.4 Lung Injury Models The need to understand molecular mechanisms of injury and regeneration urged the development of various animal models. Two of the best characterised are the elastase/emphysema model of chronic obstructive pulmonary disease (COPD) and the LPS acute lung injury (ALI) model of adult respiratory distress syndrome (ARDS). 10 COPD is defined as a disease state characterized by the presence of airflow obstruction due to chronic bronchitis or emphysema, usually associated with the smoker’s lung. The first reproducible model of pulmonary emphysema was described in 1965 112 . This model was achieved by instilling the plant protease, papain, directly into lungs of rats and provided the basis for the protein-anti-proteinase hypothesis of human emphysema. Following this first report, various modifications of the protocol emerged which allowed the description of the emphysematous reaction. The elastase model has been widely use for the study of therapies based on the administration of chemicals or for the exploration of the potential for regeneration and repair of tissue engineering strategies 113,114 (reviewed in 115). ARDS consists of the presence of pulmonary edema in the absence of volume overload or depressed left ventricular function. ARDS occurs in children, as well as adults, and the condition originates from a number of insults involving damage to the alveolocapillary membrane, with subsequent fluid accumulation within the airspaces of the lung. LPS is a macromolecular cell wall surface antigen of Gram-negative bacteria. The presence of LPS in the lungs results in early deterioration of respiratory function and induction of severe pulmonary edema with recruitment of leukocytes from peripheral blood into the interstitial pulmonary tissue 116. LPS models vary with administration method. While intranasal administration of LPS induces controlled ALI, intravenous and intraperitoneal administration may result in non-specific tissue damage and the degree of injury is much more difficult to control. New alternatives for lung regeneration and repair would clearly be of enormous clinical potential as available therapies, in most cases transplant, are clearly insufficient to supply the existing demands. Moreover, the complexity of lung architecture urges the necessity for the development of therapies that would allow in a simple way the enhancement of lung specific regeneration ability (stem cells niches) or the recruitment of circulating stem cells to achieve the same purpose. Either way, the ability of stem cells to repair damaged tissue is a matter of discussion within the scientific community and further proof of its potential is needed. 11 1.5 Tissue Engineering: Creating Lung Tissue Ex-Vivo Tissue engineering aims to build new tissues ex vivo to replace or restore damaged tissue function. To accomplish this, it is necessary to join knowledge from life sciences and engineering in an attempt to produce a functional tissue based on three basic components: cells, scaffolds and signalling. Lung is a particularly difficult target for tissue engineering due to the combination of several cell and tissue types with a specific vasculature. This combination makes lung architecture one of the most complexes in the human body. Thus, the prospect of achieving the ex-vivo construction of a functional lung is still far in the future. Lung tissue engineering is a multi-disciplinary area of research, requiring culture and differentiation of stem cells into functional lung derivates for tissue implantation. Lung specific characteristic urges the need for the production of the alveolar gas exchange units. Lung particular stem cell niches allow that the alveolar gas exchange units may be replaced by ATII instead of directly by ATI, by a mechanism existent in normal lungs as a response to damage. ESCs could provide an inexhaustible cell source for the production of the desired specific cell types. This unlimited resource is of extreme importance as the complexity of lung makes it almost impossible to retrieve endogenous stem cells both in the quantity and quality needed to develop tissue ex-vivo. 1.5.1 Derivation of Type II Pneumocytes from Murine ESCs ATII were first derived from murine ESCs by a supplemented medium approach 117,118 . Since then, the protocol has evolved to a three-step strategy that allows obtaining distal lung epithelial progenitors, thought to be representative of those present at early branching at approximately embryonic day 10-11 of murine foetal development 5. The present work adopted a modification of the most recent protocol where a new endodermic differentiation factor, noggin, is added in combination with activin A i . Activin A is known to induce the formation of both mesoderm and endoderm, by the activation of the nodal signalling pathway, crucial for the formation of definitive endoderm in the embryo 5. This simultaneous induction is established by the analyses of the expression of endoderm markers, such as Sox17, GATA4 and Foxa2, and the mesoderm marker Brachyury T 5. Moreover, endothelial markers (such as CD31, Flk1/KDR and CD133) are also induced following activin A induction of nodal signalling. Finally, distal lung commitment can be verified by the expression of adult progenitor cell markers (Sca1 and Abcg2/Bcrp1), the absence of i Work currently in progress. 12 the pluripotency marker Oct4 and the expression of early distal lung markers (TTF-1 and SPC). Several other strategies for the differentiation of pulmonary epithelial cells from murine ESCs have been employed. For example, a combination of specific medium supplementation and growth at the air interface can induce the formation of tracheobronchial airway epithelium T-cell extracts 88 119 and a method originally used to convert fibroblasts into T cells using was adapted and applied to murine ESCs to derive ATII 89. Alveolar epithelium markers were found after 5 days of culture of ESCs with microdissected lung mesenchyme, patterning the alveolar stimuli that occurs in vivo 90 . This stimulus was also found in a co-culture experiment of ESCs with dissociated embryonic lung 91 . Recently, it was demonstrated that ATII have the ability to reduce collagen deposition and the severity of lung fibrosis, hence demonstrating the potential role of ATII in lung regeneration and repair 92. The authors of this study investigated the role of ATII in the fibrosis process by intratracheal transplantation of isolated ATII in an experimental model of bleomycin-induced lung fibrosis in rats. In human cells, Wang and co-workers were the first to derivate pulmonary epithelium in vitro from human non-pulmonary somatic stem cells 120 . They showed that adult BM-derived MSCs differentiate to airway epithelium when co-cultured with human airway epithelial cells. Recently, the differentiation of ATII from human ESCs was achieved, by a supplementing medium approach 121,122 respiratory epithelial-like phenotypes . Moreover, foetal mouse lung was shown to induce in human differentiation was observed to a very limited extent ECSs when co-cultured, although 123 . 1.5.2 Implantation of Murine ESC-Derived Lung Cell Progenitors The prevalence of lung diseases and the lack of an effective means to restore normal lung physiology besides transplantation, urges the need to an alternative method to promote lung regeneration. Although several works suggest that circulating cells may home to and engraft at injury sites offering exciting perspectives for lung regeneration and repair, the controversy surrounding the accuracy of these results makes it impossible to assess the efficiency and utility of this approach. Tissue engineering could fulfil the existing lack of means to repair and regenerate injured lungs. Even though the development of a stem cell-based therapy is still a distant prospect, recent research has identified several strategies to produce lung cells from ESCs in 13 vitro. These advances open the door to the initial stages of development of cell therapies particularly for the exploration of the alveolar stem cell niche. The ex-vivo derivation of ATII allows the study of the potential of an exogenous source of ATII to integrate into the endogenous stem cell niche and improve the lungs’ natural regeneration cycle. The implantation of murine ESC-derived lung cell progenitors constitutes the first step towards the evaluation of the real potential of ESCs in lung regeneration and repair, envisaging the human lung regenerative medicine in a near future. 14 2 Materials and Methods 2.1 Cell Culture 2.1.1 Maintenance of Murine ESCs The murine ESC line E14-Tg2α (male cells, a gift from Prof. Austin Smith, University of Edinburgh, UK) stably transfected with SPC/eGFP (Doctor Helen Rippon, Imperial College of London, UK) was routinely cultured in an undifferentiated state on gelatine (0.1% v/v, Sigma-Aldrich, Dorset, UK) coated cell culture flasks in the presence of 1000 U/mL of leukaemia inhibitory factor (LIF, Chemicon, USA). Cells were maintained in complete medium consisting of Dulbecco’s Modified Eagle’s Medium (DMEM, Invitrogen, Paisley, UK) supplemented with 10% (v/v) batch tested foetal bovine serum (FBS, PAA Laboratories, Austria), 0.1 mM 2-mercaptoethanol (Sigma-Aldrich) and 2 mM L-Glutamine (Invitrogen). Cells were cultured in an incubator at 37ºC under a humidified atmosphere of 5% CO2 and medium was changed every other day. 2.1.2 Differentiation of Murine ESCs into Lung Cell Progenitors Undifferentiated murine ESCs cultured as described previously were harvested by trypsin treatment (0.05%, 10 minutes at 37ºC, Invitrogen) and cultured in suspension in non-tissue specific Petri dishes in complete medium without LIF (day 0 (d0)) to allow the formation of EBs. Cells were cultured in suspension from d0 until d10 when EBs were plated into gelatine-coated flasks. On d3 EBs were transferred to serum-free medium (DMEM supplemented with 10% KnockOut Serum Replacement (KOSR) and 2mM L-Glutamine) containing 100 ng/mL of activin A (R&D systems, MN, USA) and 50 ng/mL of noggin (R&D systems, Abingdon, UK) and medium was replaced on d5. On d7, cells were removed from the differentiation medium and culture was continued in serum-free medium (DMEM supplemented with 10% KnockOut Serum Replacement (KOSR) and 2mM L-Glutamine). EBs were plated on d10, medium was changed on d15 and, from then, every 3 days until a maximum of 35 days. 15 2.2 Cell Culture Characterization 2.2.1 Flow Cytometry Differentiated cells were harvested for cell sorting once SPC-eGFP expression was detected (d21-d35). Cell clumps were dissociated by treatment with 0.05% trypsin containing 2% (v/v) chicken serum (15 minutes, 37ºC, Invitrogen) and cells were resuspended in DMEM with 0.1 mM EDTA to reduce cell clumping. The mixture was sieved through a 100µm mesh to remove any existent clumps. Viable cells were counted by trypan blue exclusion and cell density was adjusted to 7-10×106 cells/mL. Cells were sorted by fluorescence-activated cell sorting (FACS, St. Mary’s Campus, ICL) based on eGFP fluorescence measured in the FL1 channel. Autofluorescence was detected in the FL2 channel (orange fluorescence). Both eGFP positive and negative cells were retrieved for further characterization. 2.2.2 Reverse Transcription-Polymerase Chain Reaction RNA was extracted from differentiated ESCs using TRIzol reagent (Invitrogen) and quantified by spectrophotometry. RNA was DNase I-treated using RQ1 RNase-free DNaseI (Promega, Madison, WI), and then 3 µg of RNA was reverse-transcribed into cDNA using the Superscipt III reverse transcription-polymerase chain reaction (RT-PCR) system (Invitrogen) and a random hexamer primer. Real-time PCR was performed using a GeneAmp SDS 5700 thermal cycler and the Kit (both Applied Biosystems, Foster City, CA). PCR reaction mixtures contained cDNA template, primers, 1×SYBR Green PCR buffer, 3 mM MgCl2, 200 nM each of dATP, dCTP, dGTP, and 400 nM dUTP, 0.75 U of AmpliTaq Gold, and 0.25 U of AmpErase UNG in a final volume of 25 µl. Each PCR reaction was performed in triplicate, and positive controls and non-template negative controls were also included in each PCR run. Primers were designed using Primer-Express software (Applied Biosystems) and primer concentrations were optimized for each primer pair according to the PCR kit protocol. Primer sequences are shown in Table 1. Thermal cycling parameters were: 50°C, 2 minutes; 95°C, 10 minutes; followed by 40 cycles of 95°C, 15 seconds; and 60°C, 1 minute. PCR products were separated on 2% agarose gel and visualised by ethidium bromide fluorescence. All gels were run for 20 minutes at 77V (Bio-Rad Model 200/2.0 power supply, Richmond, USA). Gels were visualised using Gene Flash Gel Documentation System with GelVue UV transilluminator at 245 nm and images were captured with a prefitted Pulnix High Performance CCD camera (Syngene Bio Imaging, Cambridge, UK). 16 Table 1 - Reverse transcription-polymerase chain reaction primers Gene SPC F: R: TTF-1 F: R: F: R: CCSP F: R: eGFP F: R: Sox17 F: R: GATA4 F: R: CD31/PECAM1 F: R: Flk1/KDR F: R: CD133 F: R: Oct4 F: R: Abcg2/Bcrp1 F: R: Sca1 F: R: Brachyury T F: R: AQP5 F: R: 18s F: R: Primer sequence (5'-3') CTCCACTGGCATCGTTGTGT GGTTCCTGGAGCTGGCTTATAG CGTACCAGGACACCATGAGGAAC TTGCTTGAAGCGTCGCTCC TAACAGCAATGAGGCTGACG AGTTTTCCCTTCCGATGCTT GCCTCCAACCTCTACCATGA GGGCAGTGACAAGGCTTTAG CTGACCCTGAAGTTCATCTGCA AGTTGTACTCCAGCTTGTGCCC GTCTGCCACTTGAACAGTTGAAG AGTGGGATCAAGACTTTTGGAA TGCTCTAAGCTGTCCCCACAAG AACCCGGAACACCCATATCCT ACTCACGCTGGTGCTCTATGC GAGCCTGAGGAATGACGTAGCT AGCCGGCCAGTGAGTGTAAAA GGACAAGTCCCTTGCAGTCTGA GAAAAGTTGCTCTGCGAACC CTTGTTGCTTGTTTGCTGGA CTGCTGAAGCAGAAGAGGATC TGGTTCCTGTAAACCGGCGCCAG CGCAGAAGGAGATGTGTTGA CATCCAGGAAGAGGATGGAA CCCTTCTCTGAGGATGGACA AAGGTCTGCAGGAGGACTGA CCTATGCGGACAATTCATCTGC ATCGGAGAACCAGAAGACGAGG AGATCTCTCTGCTCCGAGCCAT AACAGCCGGTGAAGTAGAT AAGCATTTGCCAAGAATGTTTT AAATCGCTCCACCAACTAAGAA 2.2.3 Immunocytochemical Characterization of the Murine ESC-Derived Lung Cell Progenitors Immunocytochemical (ICC) characterization was carried out both in EB culture samples (days 7 and 21) and on cytospun sorted cells. EBs samples were fixed, frozen and cryosectioned (6 µm) as described for tissue samples (Section 2.3.3, below). The sections were then fixed in blocking buffer for 30 minutes (phosphate buffered saline (PBS), 20% normal serum (serum from the animal in which the secondary antibody was raised), 0.1% Triton X-100) incubated overnight with the primary antibody (Table 2), washed three times in PBS and incubated at room temperature for 1 hour with the secondary antibody (Table 2). Cell were coverslipped with an anti-fade mounting medium (Vectashield with 4’,6 diamidino-2-phenylindole (DAPI), Vector laboratories, 17 Burlingame, UK). Appropriate positive and negative controls were included in each ICC experiment. Cytospins were prepared by resuspending sorted cells in serum-containing medium (DMEM + 10% FBS) at a density of 25×103 cells/mL for the negative sorted cells and 12.5×103 cells/mL for the SPCeGFP positive cells. Cells were spun onto Polilysine slides (VWR) for 5 minutes at 1500 rpm (200 µL of cell suspension per cuvette) in a Shandon Cytospin centrifuge. Since cell density was low, the centrifuge was pre-run with 50 µL of serum-containing medium (20%), to wet the filter cartridges and reduce cell adherence to the filter. Cytospins were fixed in 4% paraformaldehyde for 5 minutes and slides were stored at 4ºC in PBS. ICC was carried out as described before. Table 2 – Summary of the antibodies used in ICC. Source Primary antibidies Sox17 Goat foxa2 Goat SPC Rabbit AQP5 Rabbit Secondary antibodies anti-goat Rabbit antiGoat rabbit Dilution 1:100 1:100 1:2000 1:100 Supplier Refrence S.C.Biotech. sc-17355 S.C.Biotech. sc-9187 Whittset Chemicon AB3069 1:100 Chemicon AP106F 1:100 Chemicon AP307R 2.2.4 Microscopy All microscopic observations were performed using an Olympus LG-60 epifluorescence microscope and pictures captured using a Zeiss Axiocam digital camera and analysed using KS-300 3.0 software (Imaging Associates, Thames, UK). 18 2.3 Cell Implantation 2.3.1 Labelling of Differentiated Cells The mixed population of murine ESC-derived lung cell progenitors was labelled using the Vybrant CFDA-SE ii Cell Tracer kit (Invitrogen) and/or with paramagnetic dextran-coated iron oxide nanoparticles (provided by Doctor Kishore Bhakoo, Stem Cell Imaging Group, ICL). These iron oxide particles include a Fluorescein Isothiocyanate (FITC) label. This double label strategy was employed to allow cell tracking by fluorescent microscopy and electron microscopy. The first will be employed for the initial screening of tissue sections by fluorescent microscopy; the second will allow engraftment confirmation and the clear assessment of cell phenotype. Briefly, cells were harvested (by trypsin treatment) into single cell suspensions and resuspended in the label solution at a density of 1×106 cells/mL of probe (the solution was prepared by diluting the stock in 90 µL of DMSO). Cells were incubated for 10 minutes at 37ºC and resuspended in pre-warmed medium (DMEM + 10% KOSR). The solution was then incubated for 30 minutes after which the reaction was stopped (cells were spun and resuspended in PBS) and cells washed 3 times in PBS and resuspended at a density of 5×106 cells/mL. Notice that CFSE fluorescence intensity will half at each subsequent cellular division, since the dye is inherited equally by both daughter cells. For the iron oxide staining, cells were incubated overnight in culture with the nanoparticles (dilution 1:200) and the particles taken into the cell in small vesicles. The harvesting procedure was carried out as described for the CFDA-SE labelling. 2.3.2 In vivo Studies In vivo sex-mismatched animal studies were carried out in collaboration with Doctor Masao Takata (Department of Anaesthetics, ICL). C57BI/6 female mice (originally derived from the 129/Ola strain) were treated with LPS intra-tracheally (50 ng) to induce lung injury via inflammation (6 or 24 hours before implantation). Healthy and LPS injured mice were injected into the tail vein with a dose of 1×106 cells in 200 µL saline solution or with 200μl saline alone as controls. Mice were sacrificed at different time points post-implantation (1, 2, 5 and 7 days) and organs harvested for histological analysis. ii CFDA-SE once inside the cells is cleaved by intercellular esterases to become carboxyfluorescein succininidyl ester (CFSE), which is fluorescent. 19 2.3.3 Tissue Recovery and Histological Analysis Harvesting Tissues from Implanted Mice At cull organs were recovered (lungs, liver, spleen, heart, gut, ovary, kidney and brain), fixed overnight in 4% paraformaldehyde and cryoprotected in 30% (w/v) sucrose. Tissue Freezing Organs were mounted in OCT mounting medium (Bright Instruments, UK) in foil molds of approximately 1 centimetre in diameter and left resting for half an hour at least (this resting time ensures that all the sucrose solution is replaced by OCT). The preparations were snap frozen in isopentane previously cooled down in liquid nitrogen, wrapped in tin-foil, labelled and stored at -80ºC. Cryostat Sectioning Frozen organs were sectioned using a cryostat (Bright Instrument) at approximately 20ºC. Section thickness was adjusted to 7 µm for lung and 30 µm for the remaining organs. Sections were collected onto charged slides (Polilysine glass slides, VWR International, WitterWhorth, UK), wrapped in tinfoil and stored at -20ºC. Microscopy All microscopy observations were made using as Olympus BX-60 epifluorescence microscope and pictures captured using a Zeiss Axiocam digital camera and analysed using KS-300 3.0 software (Imaging Associates, Thames, UK). 2.3.4 Fluorescent In Situ Hybridization (FISH) for Y chromosome Fluorescent in situ hybridization (FISH) assays of frozen tissue sections were used to identify the Y-chromosomes in any engrafted, male cells. Briefly, frozen sections of 7 µm were thawed and incubated in saline sodium citrate (4×SSC (sodium chloride-sodium citrate in distilled/deionised water) buffer, pH 7.0) for 30 minutes. Slides were incubated in pepsin for 5 min and washed twice in PBS for 5 minutes, washed once with formaldehyde PBS/CMgCl2 for 1.5 minutes and with PBS for other 1.5 minutes, then followed by serial ethanol dehydration steps (3 min each). Sections were denatured at 65ºC for 2 minutes in preheated 70% formamide and 2×SSC buffer, pH 7.0, and subsequently ‘quenched’ with ice-cold 70% ethanol for 1.5 min. Serial ethanol dehydration was performed again. The mouse Y chromosome probe is conjugated with a Cy3 tag (STAR*FISH; Cambio, Cambridge, England) was denatured at 65ºC for 10 minutes and applied to the sections at 45 C. The sections were 20 coverslipped and sealed with rubber cement for incubation overnight in a hydrated slide box at 42ºC. The next day, coverslips were carefully removed in preheated 2×SSC buffer, pH 7.0, at 45ºC. Sections were placed in preheated 50% formamide in 2×SSC buffer for 5 minutes each at 45ºC and gently washed twice in preheated 0.1×SSC buffer for 5 minutes each at 45 ºC. Appropriate positive and negative controls were included in each Y-FISH experiment. 21 3 Results 3.1 Differentiation and Characterization of Murine ESCs Murine ESC-derived lung cell progenitors were derived following a modification of the Rippon protocol 5. Culture was carried out in three steps according to Material and Methods description. Endoderm differentiation was induced in EBs suspension cultures by the addition of a combination of activin A and noggin. Lung cells, derived from the endoderm layer of the embryo, and endoderm markers can be detectable from day 7 of culture 5. Cultures were characterised at various time points. The presence of the endodermal markers Foxa2 (Figure 2) and Sox17 (Figure 3) was evaluated by ICC. A B C D Figure 2 – Foxa2 expression in day 7 EBs. ESCs committed to an endoderm lineage at day 7 were detected by fluorescent ICC for foxa2. Foxa2 expression was detected mostly in the peripheral area of the EB. A – Foxa2 (x20). B – Merging of Foxa2 (green) and DAPI (blue, x20). C – Foxa2 (x40). D – Merging of Foxa2 (green) and DAPI (blue, x40). 22 A B C D Figure 3 – Sox17 expression in day 7 EBs. ESCs committed to an endoderm lineage at day 7 EBs were detected by fluorescent ICC for Sox17. Sox17 expression was detected mostly in the peripheral area of the EB. A – Sox17 (x20). B – Merged Sox17 (green) and DAPI (blue) (x20). C – Sox17 (x40). D – Merged Sox17 (green) and DAPI (blue) (x40). As can be observed, foxa2 and Sox17 expression was detected mostly in peripheral regions of the EBs. By day 21, green fluorescence appeared indicating the presence of SPC-expressing cells (Figure 4). SCPeGFP fluorescence will be present in culture on average between days 21 and 35, being at maximum around day 25 5. SPC is an ATII specific marker, meaning that the presence of eGFP-positive cells indicates differentiation of murine ESCs to ATII. The observed SPCeGFP expression followed the special pattern shown by the endoderm markers, being mostly detected in the periphery of the EBs, suggesting that SPCeGFP cells are derived from those identified at day 7 as positive for endoderm markers. 23 A B C D Figure 4 – SPCeGFP expression in adherent EBs at day 21. ESCs committed to a distal lung lineage were detected by eGFP expression at day 21. The images represent the overlapping of transmitted light and fluorescent images. SPCeGFP expression occurs mostly at peripheral areas of the attached EBs (x40). To further characterize the cultured cells and to quantify the ESCs expressing distal lung lineage markers, cells were sorted by FACS at day 25, based on eGFP expression. This time point corresponds to SPCeGFP maximum expression (Figure 5). The proportion of SPCeGFP positive cells is 1% of total cells. Both SPCeGFP positive and negative cells were retrieved and studied for specific markers (Figure 6 and Figure 7). The sorted population was characterized by mRNA expression analysed by RT-PCR (Figure 6). The population was studied for lung specific markers (SPC, TTF-1 and CCSP), endoderm markers (Sox17, GATA4, and foxa2), mesoderm markers (Brachyury T), adult progenitor cell markers (Sca1 and Abcg2/Bcrp1), endothelial markers (CD133, flk1/KDR and CD31) and pluripotency markers (Oct4). The expression of lung specific markers was observed only in SPCeGFP positive cells indicating their commitment to a distal lung lineage. Pluripotency was assessed by the expression of Oct4. Neither eGFP positive nor eGFP negative cells expressed Oct4 indicating the differentiated status of the population. 24 A D B E C F Figure 5 – FACS results from 2 experiments. The mixed population of murine ESCs-derived lung cells progenitors was sorted by FACS for eGFP expression. The proportion of SPCeGFP positive cells was of approximately 1%. A, D – Distribution of unsorted cells. B, E – Percentage of SPCeGFP positive and negative cells. C, F – Distribution of cell number with fluorescence intensity. Figure 6 – RT-PCR results. The day 25 mixed population of ESCs-derived lung cell progenitors sorted by FACS was analysed for the expression of lung specific, endoderm, mesoderm, ectoderm, hematopoietic and pluripotency markers by PCR. Lung specific markers SPC, CCSP and TTF-1 are restricted to SPCeGFP positive cells. (Data generously provided by Doctor Helen Rippon) 25 The expression of endoderm markers was found in eGFP-positive and negative cells, as was expected following activin A induction 5. The same expression pattern was found for the endothelial markers. It should be noticed that some eGFP expression was detected in cells of the supposedly eGFP-negative population, which could be due to contaminating positive cells in the negative cell fraction resulting from the sorting procedure itself. In parallel to mRNA analysis, both positive and negative sorted cells were cytospun onto slides for ICC characterization. These results are presented in Figure 7 and Figure 8. A B C D Figure 7 - The expression of SPC in SPCeGFP positive cells. SPC is a surfactant protein assembled in the cytoplasm. SPC (red) and nuclei (DAPI blue). A, C – SPC positive cells. B, D – Overlapping of blue light, green light and UV fluorescence. (A and B x20, C and D x40). In fact, and most importantly, the presence of the SPCeGFP construct was evaluated by confirming the expression of SPC in SPCeGFP-positive sorted cells (Figure 7) and the potential for differentiation of ATII into ATI evaluated by the presence of Aquaporin 5 (a ATI specific marker) in SPCeGFP positive cells (Figure 8). Unfortunately, SPCeGFP fluorescence was lost during cell sorting. 26 A B C D Figure 8 - The expression of AQP5 in SPCeGFP positive cells. AQP5 is a membrane transporter present in ATI. AQP5 (red) and nuclei (DAPI blue). A, C – AQP5 positive cells. B, D – Overlapping of blue light, green light and UV fluorescence. (A and B x20, C and D x40). 27 3.2 Implantation of Murine ESC-Derived Lung Cell Progenitors The potential of murine ESCs-derived distal lung progenitors to home and engraft to lung was evaluated in vivo in C57BI/6 mice. The mixed population of cells was injected into the tail vein of both healthy and LPS injured mice. Mice were administered unsorted populations of cells (harvested between days 25 and 30 of culture) and were sacrificed at different times post-implantation (Figure 9). Figure 9 – Experimental layout of the implantation of murine ESC-Derived Lung Cell Progenitors. ESCs were driven toward a distal lung cell lineage by culture with a combination of activin A and noggin. The population of cells was labelled then injected into both healthy and LPS injured mice. Mice were sacrificed at different times post-implantation and organs harvested for analysis. The homing of implanted cells to the mouse lungs was confirmed by fluorescent microscopy as cells were labelled with a green fluorescent cell tracker (CFSE). As the co-localization of markers by fluorescent microscopy is a subject of controversy within the 28 scientific community, cells were also labelled with iron oxide nanoparticles (Figure 10) allowing their detection by electron microscopy. Electron microscopy would confirm not only the presence of the cells, but would also allow the confirmation of their phenotype. Unfortunately, electron microscopy results were not ready in time for the submission of this Master Thesis. A B C D Figure 10 – Iron oxide cell labelling. Prior to implantation the population of lung cell progenitors was labelled with a green fluorescent cell tracker protein, CFSE, and with iron oxide nanoparticles with a FITC tag (green FITC tag and blue nuclei (DAPI)). A and B x40. C and D x60. 29 In vivo Studies Sex-mismatched in vivo studies were carried out using female black C57BI/6 mice. The studies were run in parallel in healthy and LPS injured mice. LPS injury is a well establish model of ARDS. Injury was induced by intratracheal instillation of LPS toxin 6 or 24 hours prior to murine ESCs implantation to evaluate the potential of the implanted cells at different time points of injury evolution. Mice received 1×106 cells in 200 µL saline solution by tail vein injection according to Materials and Methods description. Both health and injured mouse controls received saline solution only. Mice were sacrificed at 1, 2, 5 and 7 days post-implantation and organs harvested for analysis. Weight gain is an indicator of the degree of mouse injury and recovery. Animal weights were registered throughout these in vitro studies (Table 3 and Table 4). Mouse weights were analysed in terms of percentage of body weight to allow data comparison. Unfortunately, some time points lack duplicates, which limits the possible conclusions of the weight variation study. This factor is clear when mice culled at 1 and 5 days are included (Figure 11 and Figure 12). For these time points, there seems to be a decrease in body weight that is out of the global tendency. If one ignores these time points, the results would be comparable for healthy and injured mice and weight gains would be similar to the controls. For the correct assessment of weight gains, more replicas of time points are needed. Figure 11 – Representation of the changes in body weight of mice between implantation and cull. Comparison of healthy and LPS injured mice. Control mice received only saline solution. Error bars represent standard deviation from the average value. 30 Figure 12 - Representation of the changes in body weight of healthy mice between implantation and cull. Comparison of the different types of labelled cells administered to healthy mice. Control mice received saline solution only. Error bars represent standard deviation from the average value. Table 3 – Summary of body weights for the healthy mice. Mice received CFSE and iron oxide (Fe2O3) labelled cells. Controls received saline solution only. (*reduced dose 50%). Weight (g) % body Weight Implantation Cull Cull Cull (days) Healthy 20.3 20.2 100 1 Healthy 19.9 21.0 106 2 Healthy 20.2 20.7 102 2 Healthy (Fe2O3) 17.4 18,7 107 2 Healthy 19.5 19.3 99 5 Healthy 19.3 19.5 101 7 Healthy 18.5 19.6 106 7 Healthy (Fe2O3) * 16.5 18.4 112 7 Healthy Control 19.6 20.5 105 2 Healthy Control 19.7 20.2 103 2 Healthy Control 19.5 19.0 97 7 Healthy Control 18.0 20.3 113 7 31 Table 4 - Summary of body weights for LPS injured mice. Mice received CFSE and iron oxide (Fe2O3) labelled cells. Controls received only saline solution. (*reduced dose 50%). Weight (g) % body Weight Implantation Cull Cull Cull (days) LPS 6 h 19.2 18.8 98 1 LPS 6 h 19.3 20.4 106 2 LPS 6 h 18.6 19.4 104 2 LPS 6 h (Fe2O3) 19.7 19.6 99 2 LPS 24 h 18.1 18.3 101 2 LPS 24 h (Fe2O3) 19.5 19.4 99 2 LPS 6 h 18.3 18.6 102 5 LPS 24 h * 19.2 20.0 104 7 LPS 24 h 18.2 18.8 103 7 LPS 24 h (Fe2O3) * 20.0 20.5 103 7 LPS 24 h (Fe2O3/CSFE) 18.5 20.5 111 7 LPS Control 19.7 20.0 102 1 LPS Control 18.9 19.6 104 7 32 Healthy Mice Implanted distal lung progenitor cells were found in lungs of healthy mice at 1 (Figure 13), 2 (Figure 13) and 5 (Figure 14) days post-implantation. By day 7, no fluorescently labelled cells were found in the lungs. The quantity of cells decreases with time postimplantation, with the maximum of cells found in mice culled after just 1 day (Figure 13). Interestingly and contrarily to the descriptions of experiments implanting BM-derived cells 71-77, injury does not seem to be necessary for the detection of cells in the lungs. Cells were detected only in the distal lung and not in proximal airways or near large blood vessels. Sections were analysed under blue fluorescence for the presence of the CFSE labelled cells, green fluorescence to confirm that presence (unspecific fluorescence would be detectable using all fluorescence filters) and under UV light for detection of nuclei (DAPI). The three images were overlapped and the presence of labelled cells was confirmed by the maintenance of the green colour in the overlapped image. A B C D E F G H I Figure 13 – Lung sections of healthy mice culled 1 day after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 1 day after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the labelled cells (A, B, C, D and G), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei, DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 33 A B C D E F G H I Figure 14 – Lung sections of healthy mice culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 34 A B C D E F G H I Figure 15 - Lung sections of healthy mice culled 5 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of healthy mice 5 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 35 LPS Injured Mice Labelled cells were found in lungs of mice LPS-injured 6 hours before implantation at 1 (Figure 16), 2 (Figure 17) and 5 (Figure 18) days post-implantation. The apparent number of cells found in LPS injured mice seems to be lower than in healthy mice at the same time points, though the same decreasing trend of cell number for later days post-implantation was observed. Once more, the presence of cells was detected only in the distal lung and not in proximal airways. The lower level of cells detected in this case could be explained by the administration method. Cells were delivered intravenously and LPS injury is known to affect lung vasculature, which might have destroyed the delivery channels. Once again, sections were analysed under blue light fluorescence for the presence of green labelled cells, green light fluorescence to confirm that presence, and UV light fluorescence for the presence of the nuclei (DAPI). A B B C D E F G H I Figure 16 – Lung sections of LPS injured (6 hours pre-implantation) mice culled 1 day after cell implantation. The presence of labelled murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours before implantation) mice 1 day after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10 G, H and I x20. 36 A B C D E F G H I Figure 17 – Lung sections of LPS injured (6 hours pre-implantation) mice culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours before implantation) mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, B, C, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 37 A B C D E F G H I Figure 18 - Lung sections of LPS injured (6 hours pre-implantation) mice culled 5 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured (6 hours prior to implantation) mice 5 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 38 Mice LPS injured 24 hours pre-implantation were culled at 2 and 7 days postimplantation. As for the studies with mice injured 6 hours pre-implantation, by day 7, no green labelled cells were found in the lungs; however, positive cells were present at day 2 (Figure 19). In fact, the results for this particular time point are comparable to those for 6 hours LPS injury (Figure 17) and the same reduction in the numbers of cells detected, when compared to healthy mice, was observed (Figure 14). A B C D E F G H I Figure 19 - Lung sections of mice LPS injured 24 hours pre-implantation culled 2 days after cell implantation. The presence of murine ESCs-derived lung cell progenitors in lungs of LPS injured mice 2 days after implantation was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of these cells (A, D and G; white arrows indicate green fluorescent cells), this presence was confirmed by green light fluorescence (B, E and H) and both images and UV fluorescence (nuclei DAPI) were overlapped (C, F and I). A, B and C x4. D, E and F x 10. G, H and I x20. 39 Homing of ESC-Derived Lung Cell Progenitors Specific homing of implanted distal lung progenitors to the lung was confirmed by analysing the major organs: intestine, liver, spleen, kidney, heart, ovary and brain. Both intestine and liver have the same embryonic origin as lung, the endoderm. The activin A and noggin combination induces the formation of this germ layer and BM-derived cells are known to engraft in these organs following injury 84. In the present study, no labelled cells were found in the intestine or liver (Figure 20 and Figure 21, respectively) of the sacrificed animals. A B C D E F Figure 20 – Intestine sections. The presence of murine ESCs-derived lung cell progenitors in the intestine of the implanted mice was investigated by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. A B C D E F Figure 21 – Liver sections. The presence of murine ESCs-derived lung cell progenitors in the liver of the implanted mice was investigated by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. 40 In addition, no labelled cells were found in the spleen (Figure 22) or kidneys (Figure 23). Their presence in the spleen would indicate the triggering of an acute inflammatory response. Labelled cells were likewise not detected in the heart (Figure 24), ovaries (Figure 25) or brain (Figure 26) A B C D E F Figure 22 – Spleen sections. The presence of murine ESCs-derived lung cell progenitors in the spleen of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4 magnification. D, E and F x 10. A B C D E F Figure 23 –Kidney sections. The presence of murine ESCs-derived lung cell progenitors in the kidney of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. 41 A B C D E F Figure 24 – Heart sections. The presence of murine ESCs-derived lung cell progenitors in the heart of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x 10. A B C D E F Figure 25 – Ovary sections. The presence of murine ESCs-derived lung cell progenitors in the ovary of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. 42 A B C D E F Figure 26 – Brain sections. The presence of murine ESCs-derived lung cell progenitors in the brain of the implanted mice was assessed by fluorescence microscopy. Sections were observed under blue light fluorescence for the presence of the cells (A and D), this presence was confirmed by green light fluorescence (B and E) and both images were merged (C and F). A, B and C x4. D, E and F x10. Y-chromosome FISH: Preliminary Studies Fluorescent in situ hybridisation (FISH) for the mouse Y chromosome was carried out in order to confirm the origin of green-labelled cells observed in lung sections (Figure 27). The co-localization of a green fluorescent marker with the red fluorescent Y-FISH (Y-FISH probe in conjugated with a Cy3 tag) staining would indicate that the green labelled cell were male cells. Since the in vivo studies were sex-mismatched, co-localization would confirm the presence of the implanted distal lung progenitor cells. A B C Figure 27 - Y-FISH preliminary study. The presence of implanted murine ESC-derived lung cell progenitors in the lungs of the implanted mice was assessed by Y-FISH. Sections were observed under blue light fluorescence for the presence of the cells (A), the presence of Y-FISH positive cells assessed under green light fluorescence (B) and both images and UV fluorescence (nuclei DAPI) were overlapped (C). A, B and C x20. (White arrow – Green fluorescent-labelled cell; Grey arrow – Y-FISH labelled cell) The preliminary studies did not allow the confirmation of the phenotype of the green fluorescent cells. In fact, Y-FISH positive cells were observed indicating the presence of male 43 cells that were not green fluorescent. This fact could indicate unspecific hybridisation, being necessary to optimize the present protocol. On the other hand, this absence of co-localization could mean the presence of male cells unlabelled. The presence of unlabelled cells can be explained by the lost of CFSE fluorescence with cell proliferation or cell fusion of implanted cells with lung cells, as hypothesised for BM-derived cells 85-87. Nevertheless, FISH protocol is being optimized to assure the reliability of the preliminary results. Electron Microscopy: Preliminary Studies Electron microscopy was carried out to confirm homing and engraftment of implanted cells. Electron microscopy experiments are, in fact, part of ongoing work and at the time of submission of this Master Thesis, only preliminary results for the identification of the nanoparticles were available (Figure 28). Iron oxide nanoparticles are internalised in vesicles. A B C Figure 28 – Electron microscopy preliminary study. The presence of implanted murine ESC-derived lung cell progenitors in the lungs of the implanted mice was assessed by electron microscopy. Lung samples were processed and analysed for the presence of iron oxide nanoparticles (White arrow). A x34000. B - x46000 . C - x64000 44 4 Discussion This study evaluates the potential of murine ESC-derived distal lung epithelial progenitors to home to injured lungs and promote epithelial regeneration and repair. Alveolar epithelial cell damage is an important initial event in several lung disorders such as ALI or COPD. Epithelial cell damage and cell death leads to the formation of gaps in the epithelial basement membrane. Normal repair of the epithelial layer occurs through the proliferation of ATII and their subsequent differentiation into the ATI needed for normal lung function. However, the presence of lung injury alters significantly this regeneration process. The number of ATII decreases markedly in areas of severe inflammation and extensive injury. In fact, in injury, ATI and ATII die and are replaced by a large number of fibroblasts and smooth muscle cells in a process that may lead to lung fibrosis. The availability of an exogenous source of ATII to restore its pool, might promote lung regeneration and repair. ATII have a number of important physiological functions such as the production, secretion and turnover of pulmonary surfactant. Surfactant maintains a low surface tension at the air-liquid interface of the alveoli, necessary for a proper respiratory function, thus the presence of exogenous ATII would improve the maintenance of normal lung function and promote normal epithelial repair. Although the effect of the administration of an exogenous source of ATII in lung repair is not clear yet, a recent report suggests that these cells prevent lung fibrosis 92 . ATII are also a rich source of chemokines, including inhibition factors for fibroblast proliferation and the secretion of collagen 124 . The presence of these compounds in the injured lung, from an exogenous source, might induce degradation of the new collagen deposition and halt the fibrotic process 124 . Moreover, the secretion of these compounds by a cell could constitute a local factory that allows the production to be controlled endogenously in response to injury stimulus. The pivotal role played by ATII in alveolar physiology and normal lung regeneration enhances the importance of the present study. The evaluation of the potential of an ex-vivo derived source of ATII to home and engraft to injured lungs is a first step toward tissue engineering and cell therapy strategies for the lung. In vivo studies using mouse models is the most appropriate approach for the first evaluation of ESC-based therapies in a process that will culminate in the differentiation of ATII from human ESCs and their administration. 45 4.1 Differentiation and Characterization of Murine ESCs Murine ESCs were driven to a distal lung progenitor cell lineage following a modification of Rippon three step protocol 5 where mESCs were cultured in the presence of activin A and noggin at the initial stages of suspension culture iii . As previously described, this combination allows the induction of endoderm and mesoderm and the inhibition of ectoderm formation. Activin A has been shown to induce endoderm formation by the activation of nodal signalling, necessary for the formation of definitive endoderm in the embryo 5. Moreover, the cell line used has a SPCeGFP construction, meaning that when SPC (an ATII specific marker) is being expressed, eGFP is also produced. The detection of the desired markers was achieved by PCR and ICC studies at different time points. The first evidence of differentiation appears around day 7 of culture when the first endoderm markers are express (Figure 2 and Figure 3). By day 21, the first evidence of a distal lung lineage commitment rises as eGFP expression starts to be noticeable (Figure 4). The differentiation yields of ATII were very low, between 1 and 5% (Figure 5), with variation between differentiation rounds, and are comparable to those in the literature 4,88-91. SPCeGFP-positive and negative cells were sorted, and then analysed by PCR for the presence of several markers (Figure 6). Some cells were cytospun and the expression of SPC confirmed by ICC (Figure 7). The confirmation of SPC expression allowed evaluation of the SPCeGFP construct used to detect initial commitment to a distal lung cell lineage, thus validating simultaneous expression of SPC and GFP. However, it should be noted that eGFP fluorescence was lost during the sorting process, probably by the destruction of the protein by the shear forces present in the process. The presence of ATI cells was also evaluated by ICC (Figure 8). This present can probably be explained by the differentiation of ATII cells that were derived from the mESCs, indicating that the derived ATII have the potential to differentiate into ATI as occurs in vivo. The analysis of mRNA expression allowed the confirmation of activin A and noggin induction of endoderm, following what was previously reported within the research group 5. Cells expressed both late (foxa2 and Sox17) and early (gata4) endoderm markers; the expression of mesoderm, as previously described 5 was also observed (Brachyury T). As expected, expression of SPC, TTF-1 and CCSP was observed only in SPCeGFP positive cells, although expression of CCSP (a Clara cell marker and thus a mature lung cell marker) appears to be lower than early differentiation markers for lung (SPC and TTF-1). The confirmation of the commitment to a distal lung cell progenitor lineage was obtained by the simultaneous expression of early differentiation lung markers (TTF-1 and SPC) and adult iii Ongoing work within the group. 46 progenitor cell markers (Abcg2/Bcrp1 and Sca1). Moreover, no Oct4 expression was found, indicating the loss of pluripotency of the injected population of cells. The loss of pluripotency reduces the tumour-induction risk associated with the administration of exogenous cells, making them more suitable for clinical use. Finally, the expression of endothelial markers suggests the potential of the implanted population of cells to participate in endothelial regeneration. 4.2 Implantation of Murine ESC-Derived Lung Cell Progenitors The population of distal lung progenitor cells was delivered intravenously to healthy and LPS injured mice in order to evaluate their potential for homing and engraftment. LPS injury is a well established model of ARDS, a lung disorder 116 . One of the most important ARDS consequences is inflammation a common symptom to the major lung disorders. LPS injury is induced by intratracheal instillation of toxin and cell administration was intravenous, both reducing animal suffering. Since weight gain is a well-established method of assessing mouse injury, these were registered at implantation and at cull. The pilot data collected (Figure 11 and Figure 12) does not allow a precise evaluation of mouse health, as the lack of duplicates for some time points enhances the mouse to mouse variability. However, it is clear from the analysis of the evolution of weight gains that the results for mice culled at 1 and 5 days after implantation are out of the global and expected tendency (Figure 11). Interanimal variability probably plays an important role in the observed discrepancies. Healthy mouse weight increases in a similar way to the respective control. Although the need for more duplicates is clear, these pilot results suggest that implanted cells do not affect the normal development of the mice The evaluation of lung injury is also possible by evaluating tissue structure. In normal lung, the airspaces occupy the majority of the lung’s section area (Figure 13 G). In injured lungs, the fibrotic process leads to the reduction of airspace and fibrotic tissue starts to be predominant (Figure 16 G). If one compares the appearance of injured lungs 1 day (Figure 16 G) and 5 days (Figure 18 G) after implantation, the reduction of fibrotic tissue is clear. Indeed, by day 5, airspace has recovered the predominance over the section area and the structure of the injured lungs, as observed under the fluorescent microscope, are comparable to those of healthy mice (Figure 13 G). Any role of administered cells in this process is unclear, however ATII are known to play a major role in lung regeneration and the presence of injury is known to disrupt the normal activity of endogenous ATII. The presence of a fresh source of these 47 cells could prevent the fibrotic process as the disruption of lung epithelium could be repaired with fresh ATI cells generated from the ATII. From the tissue engineering point of view, the implantation of progenitor cells has several advantages. First, the implantation of proliferative progenitor cells instead of fully differentiated cells should facilitate their integration in the host tissue: the differentiation potential allows these cells to integrate into any of the lung niches. Moreover, proliferative cells are more likely than mature cells to continue to proliferate within the host tissue, thus reducing the initial cell number of implanted cells needed. Third, early distal lung progenitor cells are capable of differentiating into several types of mature lung cells: ATI, ATII and Clara cells. Their implantation would allow the cells to mature and integrate into lungs where they are most needed, facilitating lung regeneration and repair. Their differentiation into the several lung cell types could be induced in vivo by tissue specific signals and the lung microenvironment, allowing the initial population to adapt to the host tissue’s needs and further promoting exogenous cell integration. The implantation of ATII cells or distal lung progenitor cells could also have a significant advantage over the recruitment of circulating cells. In fact, recent evidence suggests that BM cells migrate to wound-healing sites and serve as sources of fibroblasts 77. In the lung, this could represent an addition to the undesired fibrotic process in response to injury. Thus, the implantation of ATII cells has been shown to prevent this process 77 and so an exogenous source of these cells could be clearly a more effective means of repairing damaged lungs than the recruitment of BM-derived cells. 4.2.1 Homing of Murine ESC-Derived Lung Cell Progenitors Homing of murine ESC-derived lung cell progenitors was assessed by fluorescence microscopy of thin sections. All of the major organs were screened to fully evaluate the potential of distal lung progenitors to home specifically to damaged lungs. All sections were observed under blue light fluorescence for the presence green labelled cells, green light fluorescence to confirm the specificity of the observed fluorescence (since unspecific fluorescence would be present in both) and under UV fluorescence for DAPI stained nuclei. The presence of green fluorescent cells was confirmed in the lungs of both healthy and LPS injured mice. The majority of observed cells were found in the distal lung and not in the proximal lung or upper airways. In all other screened organs, no labelled cells were found. The presence of cells only in lungs could be a result of one of two major factors. One, the cells were administered to the mice via the tail vein. This vein conducts the cells directly 48 into the lungs and no signal dependant/specific homing mechanism is present in the observed result. Two, a homing mechanism, probably a tissue specific signal, promotes the homing of the implanted progenitor cells to the lungs. The last hypothesis is particularly interesting if one relates the possible homing signal with the cell type administered. Lung progenitor cells may be considered as niche specific stem cells for the lung. Therefore, it might be reasonable to assume that their natural habitat, the distal lung, may affect the ability of these cells to home specifically to lungs. Once in the lung, these cells would recognise their niche specific signals and would not be mobilised to other organs. One very important issue must be raised within this discussion: homing of murine ESC-derived distal lung progenitors was assessed by fluorescent microscopy only. At present, this evaluation method is subject of a wide debate concerning its accuracy. Several reports have been published were the validity of homing and engraftment of BM-derived cells to lungs assessed by co-localization of markers was questioned 75,76 . In fact, the scientific community was able to reach an agreement and methods that are more accurate are needed to be used to confirm the co-localization of markers, such as confocal and electron microscopy. In this context, the implanted distal lung progenitor cells were also labelled with iron oxide nanoparticles with a FITC tag, traceable by both fluorescence and electron microscopy. Unfortunately, electron microscopic results were not ready in time for the submission of this report. These results would allow the confirmation of the presence of exogenous cells in the lungs of experimental mice. Moreover, electron microscopy would be an accurate way to confirm the phenotype of the implanted cells and would allow confirmation of the engraftment of exogenous cells in the host tissue and facilitating the characterization process usually done by co-localization of markers. 4.2.2 Overtime Maintenance of Murine ESC-Derived Lung Cell Progenitors Murine ESC-derived lung cell progenitors were found in lungs of both healthy and LPS injured mice 1, 2 and 5 days after implantation. Initial studies and ongoing experiments suggest that they are not present after 7 days. Although no quantification was performed, the number of cells present in the lung seems to reduce over time post-implantation, until their complete absence at the latest time point analysed, 7 days. In fact, recently, other groups have realized that the mouse strain used in the present study show an unusual and unexpected rejection response to exogenous cells (personal communication). This might suggest that the observed results are a function of the mouse immune response. Therefore, it 49 will be necessary to compare the presented results with future similar studies using different strains of mice eliminating specific strain constrictions. Another possibility to assess eventual strain specific immune responses is to change the administration method. A recent study showed that adult ATII transplanted intratrachealy have a pivotal role in preventing and reversing the fibrotic process developed in response to bleomycin injury 92 . Nevertheless, it is important to emphasise that intravenous administration would be the simplest way to administer cells in clinical practice. Although the rejection of the cells by the lungs is a valid explanation for the observed results, one could hypothesise that cells are retained in the lungs only for the period that they are needed. Recent reports suggest that the presence of exogenous cells in injured lungs may result in a modulation of the inflammatory response 110,111 . Assuming that distal lung progenitor cells could have the same modulator role as implanted MSCs in the above-cited studies, their presence in the lung may be necessary only for the initial response to lung damage. Therefore, it is reasonable to assume that after having an important role in the initial response and having lost injury signals, exogenous cells could be expelled. In this context, it is necessary to assess the potential role of distal lung progenitor cells in the modulation of lung inflammatory response to be able to ensure that the reduction observed in implanted distal lung progenitor cells is a consequence of the decreasing level of injury with time. 4.2.3 Homing of Murine ESC-Derived Lung Cell Progenitors and Injury Distal lung progenitor cells were found in lungs of both healthy and LPS injured mice. The level of injury assessed by the administration of LPS 6 and 24 hours prior to implantation seems to indicate no difference in terms of cell engraftment. Although cells were found in both healthy and injured lungs, one difference is clear: the number of distal lung progenitors found in the lungs of injured mice was much lower than in healthy mice. One explanation for the observed difference is the administration route. As previously described, cells were administered intravenously and LPS toxin is known to have a disruptive effect on vasculature. This disruptive effect may destroy the capillary network of the lung and diminish the administration route efficiency. This diminishment of the administration route would also be promoted by the undesired triggering of the fibrosis process, which results in a general thickening of the endothelium, thus making it more difficult for the cell to cross the endothelial barrier between circulation and alveolar environment. Another possible explanation for the differences observed is the loss of the cell tracer green fluorescence with cell proliferation. In the presence of injury, ATII are known to proliferate and replace their own pool as the existent ATII would differentiate into ATI, which 50 have been destroyed by injury. This active proliferation in response to injury could induce the loss of the CFSE staining. At each division, the quantity of CFSE dye in each cell is reduced by half in each of its daughter cells. This CFSE halving could have resulted in an apparent lower number of exogenous cells in injured mice compared to healthy ones. The presence of distal lung progenitor cells in healthy and injured mice is a rather surprising result. Several reports suggested the existence of a threshold value of injury for the recruitment of BM-derived cells to injured lungs and no cells were found in healthy lungs 71,77,84 . For the recruitment of BM cells it seems reasonable to assume that a threshold of injury is needed. The same assumption is not straight when one explores the administration of ex-vivo lung lineage committed cells. Moreover, when the population of cells administered is composed of distal lung progenitor cells, which can be considered niche specific stem cells for the lung, it is reasonable to assume that those cells would be able to integrate both healthy and injured lungs. In fact, a recent report using adult ATII shows that these cells are present in both healthy and injured mice 92 . Although no threshold of injury seems to be needed, the study of other types of injury, like elastase-induced emphysema or bleomycin-induced fibrosis could be of particular interest to evaluate the real relation between the administration of distal lung progenitor cells and injury. 51 5 Conclusions and Future Trends This study provides the first evidence of homing of mESC-derived distal lung progenitor cells to lungs of healthy and LPS injured mice. Although further confirmation of engraftment and homing is needed, the presented results constitute a preliminary evidence of the capability a mixed population of murine ESC-derived distal lung progenitor cells to home and participate in lung regeneration and repair. This might be regarded as the first step towards the evaluation of the possible role of ESCs in lung regeneration and repair, aiming to reach human lung regenerative medicine in the future. In a first attempt to improve the previously established mESC culture system, new protocols for the derivation of distal lung progenitor cells that would allow greater yields of differentiation should be explored. These would be cost and time reducing and would allow an easier development of the proposed strategy for lung regeneration and repair. Also in terms of future trends, one of the major goals will be the confirmation of engraftment by more accurate techniques such as confocal microscopy for the co-localization of markers (lung markers and Y chromosome, for example – ongoing work) or electron microscopy (also ongoing work). Moreover, the role of exogenous murine-derived distal lung cell progenitor in lung injury and repair must be clarified, by other lung injury models and evaluating the potential effect of these exogenous cells in the modulation of the inflammatory response and the fibrotic process. For tissue engineering and regenerative medicine of the lung, the possibility of administrating an exogenous population of distal lung cell progenitor intravenously has several clear clinical advantages. First, intravenous administration is a common clinical practice procedure. Second, a rather immature, but also lineage-committed population of cells, instead of an undifferentiated ESCs cell population with tumourogenic potential, would allow cell differentiation only in the host microenvironment, thus contributing for a more specific response to injury and allowing the exogenous pool of cells to differentiate towards the different mature cells existent in the lung. This differentiation could be promoted by signals present in the host microenvironment. Finally, an active population of progenitor cells, rather than fully differentiated cells, could proliferate in the injured microenvironment, thus reducing the initial cell number administrated to the patient. The possibility of an exogenous unlimited source of cells that are able to promote lung injury repair would be of doubtless clinical impact and would represent in the majority of 52 severe lung injuries, an alternative means of cure allowing to save millions of lives per year, as lung diseases are estimated to be the third leading cause of death by 2020. The potential of the population of cells studied is not restricted only to lung regeneration. A population of distal lung progenitor cells could provide the means for the development of lung toxicity assays or ex-vivo drug testing. At present, the first artificial lungs, based on membrane technology, are in clinical use in Germany (NovaLung ® ). The replacement of membranes by a stem cell-derived lung epithelium would clearly represent a major breakthrough. Moreover, the mixed population of cells express several endoderm markers suggesting that they may have potential to participate in regeneration and repair of other endoderm-derived organs, such as gut or pancreas. Finally, in terms of the in vivo cell studies using the mice model, more duplicates for the different time points should be performed. In addition, the time of cell injection should be studied regarding the evolution of lung injury in order to assess in which period of LPS injury this potential treatment is more effective. 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