Workshop on Microevolution by Dana Krempels I. Discuss the meaning of: a. species b. population c. gene pool d. gene e. allele f. heritable traits (consider "nature vs. nurture") g. lethal alleles h. adaptive, maladaptive, and neutral traits i. Monogenic vs. polygenic traits species: definition varies, depending upon which species concept one holds. The most general definition, however, is that a species comprises a group of similar individuals able to breed and produce fertile, viable offspring. population: all the members of a given species living in a defined area (whether it be a stretch of coastal chaparral or your GI tract) gene pool: all the alleles at all loci in every member of a particular population gene: unit of inheritance that codes for a polypeptide (or, in some cases, an RNA) allele: one of several forms of a particular gene. Example: A GENE (the C locus) codes for coat color in rabbits, and has four alleles: agouti, chinchilla, Himalayan or albino. lethal allele: if recessive and inherited in homozygous condition, this will result in inviability of the organism inheriting it. If dominant, a single copy will result in inviability of the organism. (examples of lethal recessives: Manx allele in cats; yellow coat color in mice; dwarfism allele in rabbits) monogenic trait: phenotypic expression is controlled by only one gene locus. polygenic trait: phenotypic expression is controlled by more than one gene locus. adaptive trait increases the likelihood that an organism exhibiting it will leave its genes to the next generation. maladaptive trait decreases the likelihood that an organism exhibiting it will leave its genes to the next generation. neutral trait has no effect on the likelihood that an organism exhibiting it will leave its genes to the next generation. II. Discuss the nature of each of the following in terms its effects on a the genetic composition of a population of organisms a. mutation c. non-random mating e. natural selection b. migration d. small population size a. mutation will add new alleles to the population, and may result in a new expression of a trait. (This, in turn, will be adaptive, maladaptive or neutral, depending on the environment and its selective pressures. b. migration increases the effective size of populations between which individuals travel, and will allow gene flow between the populations. c. Positive assortative mating may result in frequency of expression of a recessive trait that is higher than that predicted by Hardy-Weinberg. Negative assortative mating may result in heterozygosity that is higher than that predicted by Hardy-Weinberg. d. Small population size will increase the likelihood of a particular allele becoming fixed in the population, to the exclusion of any other alleles at a given gene locus. e. Natural selection is the only factor that results in a population whose members are genetically (as reflected by phenotype) well-suited for survival and reproduction in a particular environment. III. Discuss the concept of Hardy-Weinberg equilibrium in terms of a. a single gene locus and its alleles in a single member of a study population One generally considers only one locus at a time when trying to determine whether a population under study is in HW equilibrium. However, there's no such thing as "Hardy Weinberg equilibrium" for a single individual. HW equilibrium is a populational phenomenon. (I've included this because I've found that students are often not clear on this concept!) b. a single gene locus and its alleles all members of study population This is the level the population biologist considers when looking at HW equilibrium (or not) in a population: one locus (and all its alleles) in all members of a particular population. c. all phenotypic traits in a single member of a study population Again, HW equilibrium is a populational phenomenon. One individual is only one small bit of the entire picture. Just trying to keep that clear in everyone's mind. d. all phenotypic traits in all members of the study population, considered collectively Although every phenotypic trait is subject to the five factors that can prevent HW equilibrium, it would be extremely difficult to monitor the HW equilibrium state of every trait in a population. The population geneticist generally considers only one locus at a time, though additional traits may be added in later studies of the population. IV. As a group: a. Select a species of organism to design from scratch. You may select any taxonomic group you wish. Give your organism an appropriate scientific name. Genus: species: b. Define this species' natural environment, including such items as: a. food sources b. predators c. space for reproduction d. pathogens in the environment e. other factors which affect the species' survival c. Design this species by listing six dominant, wild type phenotypic traits that enable it to exploit/avoid the environmental factors you have listed. (One example has been included.) Trait example: feather color dominant (wild type) phenotype green Nature of trait provides camouflage V. Taking turns and going around the group, create a recessive, but not lethal, allele for each of the above traits. Trait recessive Proportion of individuals in the phenotype population expressing recessive phenotype example: yellow 0.25 feather color VI. Let's assume there are 1000 organisms in your study population. Using the Hardy-Weinberg equation, and for each trait, calculate the number of homozygous dominant, heterozygous, and homozygous recessive individuals in this population. If 250 of these birds have yellow feathers, then they have 500 recessive alleles among them. q2 = .25 q = .5 solving for p: (1 - q = p) we get 1-0.5 = 0.5 plug into HW equation: p2 + 2pq + q2 .25 + .5 + .25 In this population, 250 should be homozygous dominant, 250 should be homozygous recessive and 500 should be heterozygous for feather color, if the population is not evolving (i.e., is in Hardy-Weinberg equilibrium). VII. Select one of the traits you have created above. For each of the possibilities below, create a scenario that might act to change the proportion of wild type to mutant alleles now present in the population. If there's time, do this for another trait or two. mutation: (example: new mutation at feather color allele results in white feathers) a mutation could produce a third allele. It might be dominant or recessive to either of the existing alleles, and its phenotype would be subject to selection. migration: If a neighboring deme to our study population had a different initial proportion of dominant and recessive alleles, immigration from that deme could change the allele frequencies in our study population if immigrants breed with locals. small population size: random sampling error is more likely to affect genotype frequencies in a small population. non-random mating: you get the idea. See the description of non-random mating above natural selection: And again. You can figure this one out and create many different scenarios that would change allele frequencies in our population. Discussion Questions 1. Describe some conditions under which a mutation generating a phenotype different from the wild type might confer a selective advantage. You may get as off the wall as you wish here. So here goes. Let's take the example of the recessive white-feathered mutant. Unless this was lethal, this new form is likely to remain in the population in heterozygous form, and rarely (depending on how many population members carry it) show up in the phenotype if it's inherited in two copies. If these birds nested in white rock cliffs, a colorsensitive predator might be better able to home in on green or yellow birds that didn't match the rocks, whereas the white-feathered birds might be more likely to escape detection. This could lead to their leaving more offspring. (Yes, there are all sorts of "but what if's..." you could add here. And you certainly should do that, if you know enough about birds, their parental care, etc.) 2. Discuss how immigration or emigration of individuals from a particular population might change allele frequencies in that population. See above. 3. What might happen to the allele frequencies of a population in the event of a natural disaster that randomly wiped out a large proportion of the individuals? This would result in Bottleneck Effect, a form of genetic drift. A major shift in genotype and allele frequencies is far more likely to occur in a small population, due to random sampling error. 4. If a small group of organisms were blown to an island during a hurricane, and could not return to the population from which they had come, what might become of the allele frequencies of that small population, relative to the original population? Similar effect as that in #3, but this time it's called Founder Effect. 5. What might happen to phenotypic frequencies in a population if organisms with similar phenotypes had a higher likelihood of mating with each other? See the description of positive assortative mating above. 6. What might happen to phenotypic frequencies in a population if organisms with dissimilar phenotypes had a higher likelihood of mating with each other? See the description of negative assortative mating above. 7. What is sexual selection? In which of the five categories above does it fall? How might it result in sexual dimorphism? Sexual selection is the result of one sex in a species showing a preference for members of the opposite sex who have a particular phenotype. It is more appropriately considered a form of natural selection than a form of non-random mating, since in this case, some members of the population might not get to mate at all. Sexual dimorphism--the existence of different morphologies between the two sexes--could evolve if a particular trait present only in one sex confers a selective advantage to members of that sex. This dimorphic trait may either make the opposite sex prefer those who express it, or it might confer a competitive advantage to the individual competing with members of the same sex for territories, food resources, etc. 8. If one particular (monogenic) trait of the several you listed is in the process of changing allele frequencies due to one of the five factors that may disrupt HW equilibrium, what does this imply about the allele frequencies of the other loci? Again, since you are monitoring only one trait at a time, it is not possible to accurately predict what will happen to other traits in an evolving population. However, traits that are chromosomally linked or otherwise closely associated with a trait that is subject to natural selection may also be affected. You can probably think of ways this could occur, and you might want to ask your workshop students what they think about this.