8. BACTERIAL GENETICS GENE MANIPULATION Genetic information – in nucleotide sequence of DNA (rarely RNA) Bacteria – most genes in chromosome, some can be in plasmid(s) Genome – a set of genes in the cell, bacteria – 1 set (N, haploid), eucaryotes – 2 sets (2N, diploids) with the exception of sexual cells Mutation The changes in genome, which are reflected in phenotype. They are heritable, spontaneous (= error in DNA replication), influencing one cell and one base pair (point mutation) Mutagens – factors that increase the probability of mutations (UV-light, γrays, etc.) – induced mutagenesis DNA repair The cell ability to detect DNA change, to mark it and to repair changed DNA = cell homeostasis No sexual processes in bacteria “parasexual” exchange of genetic information: conjugation, transduction, transformation Conjugation The transfer of genetic information from donor cell to the acceptor cell using cellto-cell contact. Conditions – sex pilli, presence of F plasmid in donor cell (free or in chromosome = Hfr cell) DNA transformation The uptake of naked DNA (fragment) by acceptor (competent) cell and its integration into chromosome Also plasmids can use this way to enter the cell Transduction = Gene transfer with vector (virus) Bacterial genes are incorporated into a phage because of error in its lytic cycle and these genes are transported into acceptor cell Important terms – temperate phage, lysogeny, prophage Prophage (phage incorporated in bacterial chromosome) during leaving host chromosome can took the host genes (= specialized transduction) GENE MANIPULATION = aimed transfer of genes based moustly on transduction Isolation of genes (1) from donor cell using restrinction endonuclease („restrinctase“) (2) from m-RNA using reverse transcriptase (3) gene synthesis according to gene map (4) gene buying Recombinant vector construction Vector (responsible for gene transfer) = virus, plasmid (R, Ti for plants), cosmid; Characteristics of acceptable vector – markers, restrinction map Steps in construction – vector opening with restrinctase, genes incorporation with ligase Result – mixture of recombinant and original vectors Recombinant cell construction Recombinant vectors (plasmids) are mixed with acceptor cells and different means are used to increase probability of plasmid entering into cell. Result – mixture of acceptor cells: original – with original plasmid – with recombinant plasmid Selection of recombinant cell Recombinant cell is selected according to plasmid marker(s) Recombinant cell cloning Selected cell are cultivated to get more cells with new genetic information, the heritability is tested Expression of new genes The optimisation of media to get asked product Another possibilities of gene transfer Gene gun – gene(s) is/are trapped on the metal particle and with high energy introduced into the acceptor Injection (micromanipulation) – gene is directly inserted into the nucleus of ovum (esp. mammals) Examples of gene manipulation results: - tomato – one time ripening - tomato – hyaluronidase blocking - bacteria – production of insulin interferons, “human” derivates, hormones, etc. - soya, maize – herbicide resistance - etc.