NCEA Level 3 Science (90729) 2012 — page 1 of 3 Assessment Schedule – 2012 Science: Describe genetic processes (90729) Evidence Statement Q ONE Achievement Structure of mRNA. • Single stranded. • Bases identified OR implied. Diagram or description given. Achievement with Merit Achievement with Excellence Explanation of how transcription occurs. The DNA unwind to expose one side and the bases, nucleotides match (A=U; G=C) and copy the code to mRNA molecule. Discussion of how transcription occurs. DNA unwinds due to enzymes (helicase). RNA polymerase starts the process. Free RNA nucleotides are matched to the exposed DNA nucleotides. A=U and G=C. Occurs for the length of a gene only needed to make a protein. DNA winds up again and remains in the nucleus. Either explanation of HOW or WHY of transcription. BOTH ideas needed with link to specific amino acids coded for and why the DNA cannot leave the nucleus. Function of mRNA. • Carry code for the making of proteins from DNA in nucleus to ribosomes for protein synthesis. Description of how transcription occurs. The code is copied from the DNA molecule to mRNA / make a mRNA molecule that carries the code from the DNA molecule. Need description of structure and function of mRNA AND either how or why of transcription. NCEA Level 3 Science (90729) 2012 — page 2 of 3 TWO Substitution is when one base is replaced by another. (Or clear diagram.) A substitution effects one triplet only and therefore only one amino acid (coded for by this triplet). AAA TTT AAA becomes ACA TTT AAA There is still the same number of triplet / codons overall and only one amino acid may change. A is replaced by C Deletion is the removal of one base pair on the DNA molecule. (Or clear diagram.) AAA TTT AAA becomes AA- TTT AAA A is removed These mutations change the order of bases (triplet codes) from the point of the mutation onwards causing a frame shift (moving of the bases in the triplet code) causing different amino acids to be coded for from the point of the mutation onwards. A frame shift mutation results in different triplet / codons from the point of the mutation onwards. Therefore different amino acids are coded for in the sequence of the polypeptide chain. This affects the overall functioning of the protein as the order of the amino acids determines how the protein folds / shape of the protein (active site) to make a functional protein. Insertion is adding one base into the DNA sequence. (Or clear diagram.) AAA TTT AAA becomes AAA GTT TAA A G is added into second codon. Descrition of all three mutations OR description of how one mutation affects the overall codon / amino acid / protein. This mutation may have no or little effect on the protein due to • The degeneracy of the code. Each amino acid may be coded for by more than one codon. A substitution mutation may change one codon but it may still code for the same amino acid; hence no effect (silent mutation). • A change in the codon may result in a different amino acid with similar properties, and it does not affect the overall function of the protein. • The mutation may be at the end of the polypeptide chain and have little effect on the overall folding and shape of the protein. Effect of all three mutations on the codon / amino acid / protein OR explanation of the effect of frame shift (from deletion / insertion) on the overall protein. Discussion of effect of substitution due to degeneracy of the code AND discussion of the effect of the frame shift on the sequence of amino acids and therefore the final structure of the protein. NCEA Level 3 Science (90729) 2012 — page 3 of 3 THREE Description of how recombinant DNA Is created. • Use of restriction enzymes to cut a specific sequence / recognition site of DNA / desired gene and the same restriction enzyme is used to cut the viral DNA • Ligase “glues” the desired gene and the viral vector together as they have the same recognition site. • Use of PCR to amply the desired gene / DNA to give sufficient copies to work with. Need 2 out of 3 processes linked to the context given. Explanation of why a viral vector is used. • Simple DNA (plasmid) and easy to add the target DNA by using the same restriction enzymes / ligase to form recombinant DNA • Easily infect the host cells without altering the recombinant DNA thus delivering the gene of interest • Once in the human cells, the virus uses the human cells to make more copies of itself (including the recombinant DNA). Description of why a viral vector is used. Easy to add the target / desired gene / DNA into the viral DNA plasmid. Easily infect the host cells / good uptake by the host cells. Fast replication within host cells. Explanation of the risks or implications of gene therapy. • The new gene could be inserted incorrectly disrupting the virus DNA OR cause a mutation, which could harm the patient when it is inserted OR it could have a detrimental effect on the human cells. • The virus can infect more than one type of cell thus healthy cells could be harmed. • The virus could affect the reproductive cells and the altered gene / mutation can be passed on to offspring. • The virus is specific to cancer cells and is an effective treatment when the drugs are used to kill the cells with the recombinant DNA only. One reason needed. Description of the risks or implications of gene therapy • The new gene may be inserted incorrectly. • The new gene inserted may disrupt or cause mutation in the viral DNA. • The virus may infect more than the target / one type of cell • The virus may affect the reproductive cells. • The virus may target cancer cells only. One risk or implication described. Description of gene therapy AND EITHER one reason why virus used OR one implication / risk. Two ideas from either “why virus” is used OR implications of gene therapy (or one idea from each) explained. Implications and risks of using a viral vector– discussion of three ideas in total. Judgement Statement Criterion Achievement Achievement with Merit Achievement with Excellence 2A 2M 2E