Nayland College Level 2 Biology – External Exam Notes! AS 91156 Demonstrate Understanding of life processes at the cellular level What you need to do guide! To get bronze (achieved)… You will need to clearly show the examiner that you understand (definitions, using annotated diagrams or models to describe, and describing characteristics of, or providing an account of) life processes at the cellular level. To go for silver (merit) You will need to demonstrate in-depth understanding (use biological ideas to give reasons how or why) of life processes occur at the cellular level. And the gold medal (excellence) goes to the student that: Demonstrates a comprehensive understanding (linking biological ideas) about life processes at the cellular level. Your answers should include: justifying, relating, evaluating, comparing and contrasting and analysing. Life processes at the cellular level include: photosynthesis respiration cell division (DNA replication and mitosis as part of the cell cycle). Biological ideas, as they relate to each of the life processes at the cellular level, will be selected from: movement of materials (including diffusion, osmosis, active transport) enzyme activity (specific names of enzymes are not required) factors affecting the process details of the processes only as they relate to the overall functioning of the cell (specific names of stages are not required) reasons for similarities and differences between cells such as cell size and shape, and type and number of organelles present. Cells include plant cells and animal cells. Rules of the game There will probably be three questions. Each question will focus on a physical factors and an associated technique. You will have 3 hours to do 3 papers, which gives you 60 mins per paper! Heaps of time to plan your answer and check you have read the question correctly The 2013 exam specs give us some clues on what the 3 questions will be. It is LIKELY the questions will be: There will probably be a question on DNA structure and semi- conservative replication Understanding of the structure of DNA, and the meaning of semi-conservative replication as part of cell division, is expected. There may be a question on how environmental factors affect photosynthesis and enzyme activity Factors affecting the processes may include the direct availability of resources (e.g. sunlight, water, CO2 are all needed for photosynthesis) as well as the indirect effect of factors that affect enzyme activity within cells (e.g. temperature, pH, substrate, concentration, co-enzymes, enzyme poisons). Another question probably on: how similarities and differences between cells may relate to the overall functioning of the organism and justifying the reasons for these similarities and differences. DNA structure and semi-conservative replication Concept DNA structure DNA Replication Key sentences DNA is a double helix molecule Made of 4 nucleotides (A, T C,G) The sequence of nucleotides determines the genetic code Each Nucleotide made of a deoxyribose sugar, base and phosphate The sugar and phosphate are identical on all DNA nucleotides The base determines which nucleotide it is (A,G,T,C) The DNA molecule has a 5’ and a 3’ end (‘ = prime) Base pairing rule: A pairs with T, C pairs with G. One DNA strand runs 5’ to 3’, the other strand runs 3’ to 5’, this is called an antiparallel structure Two enzymes involved are: Helicase, DNA Polymerase Replication fork is formed (helicase unwinds (unzips) the DNA) During replication, multiple replication forks are formed, replication happens in both directions, this speeds up replication Free nucleotides are added to the 3’ of the new strand by DNA polymerase One strand is the leading strand One strand is the lagging strand Okazaki fragments form on the lagging strand Semi-conservative replication Two new DNA molecules are formed Each new DNA molecule is made up of one strand of the original DNA, this is called semi-conservative replication. Semi-conservative replication improves the accuracy of the replication process. The nucleotides sequence on the newly formed strand can be checked against the nucleotide sequence on the original strand Why Replicate All organisms must undertake cell division Cell division is needed for growth, repair and reproduction DNA replication happens in both mitosis and meiosis A complete copy of the DNA is needed in each new cell formed. DNA contains the instructions for all essential cellular processes Cell structure and Function Concept Chloroplast Cell parts (organelles) Mitochondria Plasma membrane Vacuoles Cell wall Golgi Bodies Cell shape and size Structure in relation to photosynthesis Structure in relation to respiration Key sentences Site of Photosynthesis Substrates: CO2 and water Products: Glucose and O2 (O2 = waste product) Contains a chemical called chlorophyll Found in the upper/ outer tissues where sunlight can penetrate Site of (aerobic) Respiration Converts glucose (and other foods) into ATP Require – glucose and O2 Waste products – CO2 and H2O Semi-permeable Allows small molecules through but not large ones (glucose yes, starch no). Gases go through by diffusion. Water goes through by osmosis. Bigger molecules can pass across the membrane via active transport (uses energy). This is controlled by the cell using proteins embedded in the membrane. Plasma membranes may have small fold called microvilli In plants – vacuoles are large and take up whole centre of mature cell. Used to store carbohydrates In unicellular animals – contractile vacuoles used to regulate osmosis and food vacuoles created with food is engulfed into a vacuole (phagocytosis) Plant cells only. Strong and slightly elastic. Completely permeable (everything goes through). Transport vesicles. Carry proteins (made in the ER) to the edge of the cell Vesicles fuse with plasma membrane and release contents extra-cellular Cell shape effects the rate of diffusion in and out of the cell Cell size effects the rate of diffusion into the centre of the cell An oblong cell has a bigger surface area than a cubed cell A large cell will take longer for particles to reach the centre of the cell than a small cell Increasing the surface to volume ratio will increase the rate of passive transport. Microvilli are folds in the plasma membrane that greatly increase its surface area. When illuminated with light plant cells containing chloroplasts undertake photosynthesis. (All plant cells undertake respiration all the time). Substrates: CO2 and water. Products: Glucose and O2 Cells undertaking p/s need to be able to undertake gas exchange. A large surface/ volume ratio improves diffusion of CO2 in and O2 out. All living cells undertake respiration all the time The more energy a cell needs the more mitochondria. (muscle cells) O2 and glucose need to diffuse into the cell CO2 needs to diffuse out of the cell If O2 is insufficient, the electron transport chain stops, the kerb cycle stops and anaerobic respiration starts Key diagrams for cell structure and function Some words to use http://leavingbio.net/photosynthesis.htm http://crescentok.com/staff/jaskew/isr/biology/eoi/eoi.htm http://www.mrothery.co.uk/exchange/exchange.htm http://physicsmadeeasy.wordpress.com/biology-notes/cell-structure-and-function/ Active Transport Cell Membrane Cell Wall Cellular Respiration Chloroplast Cilia Concentration Gradient Cytoplasm Diffusion Flaccid Induced Fit Model Ion Exchange Pump Light Dependent Reaction Light Independent Reaction Mitochondria Organelles Osmoregulation Osmosis Passive Transport Phagocytosis Photosynthesis Semi-Permeable Membrane Substrate Surface Area : Volume Ratio Vacuole Enzyme Activity and Environmental factors Environmental factors on enzymes As temp increases, the kinetic energy of the molecules increases and collisions between substrates and enzymes increase. As temp decreases, the kinetic energy of the molecules decreases and collisions between substrates and enzymes decreases. However, when temp reaches a critical temp, the enzyme changes its 3D structure (denatured) (due to the kinetic energy breaking the hydrogen bonds), and the active site of the enzyme becomes ineffective pH – When an enzyme is outside of its optimum pH (too high or too low) the enzyme denatures (changes its 3D structure) and the active site becomes ineffective Most enzymes have an optimum pH of 7 (neutral). As substrate concn increases, the rate of enzyme activity increases. As substrate concn decreases, the rate of enzyme activity decreases. Increasing substrate concn increases the kinetic energy of the molecules and the number of collisions between substrate and enzyme. Environmental factors on the rate of photosynthesis Temp increases the rate of p/s Substrate concentration (CO2 or water)increases the rate of p/s Environmental factors on the rate of respiration Temp increases the rate of resp Substrate concentration (O2 or glucose)increases the rate of resp Key diagrams