Supplemental Methods Generation and expression of retrovirus The PINCO expression vector co-expressing AML1-ETO and green fluorescent protein (GFP) from an internal CMV promoter was created as previously described.(14;15) Replication-defective retrovirus was generated by transient transfection of Phoenix packaging cells (gift of Garry Nolan, Stanford University School of Medicine, CA). Expression of the AML1-ETO transduced gene in myeloid cells was performed by RT-PCR analysis as previously described.(14) Generation of human CD34+ cells expressing AML1-ETO Neonatal cord blood was obtained from normal full-term pregnancies at the Maternity Unit of the University Hospital of Wales, Cardiff, U.K. Human CD34+ cells (>95% pure) were derived from cord blood mononuclear cells using MiniMACS (Miltenyi Biotec, Surrey, U.K.) according to the manufacturer's instructions. These cells were subsequently cultured overnight at 1105 cells/ml in IMDM containing 20% FCS and the following growth factors (from R&D Systems, Abingdon, U.K.): IL-3 (5 ng/ml), IL-6 (10 ng/ml), SCF (20 ng/ml), GM-CSF (5 ng/ml), G-CSF (5 ng/ml), Flt3 ligand (5 ng/ml). On the following day cells were transduced with retrovirus on RetroNectin (Takara Shuzo, Shiga, Japan)-coated wells as previously described.(14) In this way two cultures were derived from each CD34 + preparation: control (expressing GFP alone) and AML1-ETO transduced. Following infection, cultures were maintained in growth medium containing 5 ng/ml of IL-3, SCF and G/GM-CSF. Colony assays were initiated on days 3, 6, 9 and 16 by limiting dilution in 96U plates (0.3 cells/well) in the same liquid medium containing IL-3, SCF and G/GM-CSF and incubated at 37oC with 5% CO2. Individual colonies (>50 cells) were harvested after 7 or 14 days following plating and were scored and analysed for differentiation (see “Cell surface phenotype and differentiation analysis”). Cell surface phenotype and differentiation analysis At the time-points indicated, liquid cultures were analysed by four-colour immunophenotypic analysis. Cells were stained with CD13-APC (Leinco Technologies, St Louis, MO) in combination with M-CSF-R-biotin (Santa Cruz Biotechnology Inc, Santa Cruz, CA) and one of the following PE-labelled antibodies (Dako, Ely, U.K.): CD11b, CD14, CD19, CD34 or CD56; biotinylated M-CSF-R was subsequently labelled with Streptavidin-PerCP-Cy5.5 (BD Biosciences, Oxford, U.K.). Individual colonies were aspirated and stained with CD15-biotin (Sigma, Poole, Dorset, U.K.) and CD14-APC (Leinco); biotinylated CD15 was subsequently labelled with Neutravidin-PE (Molecular Probes, Eugene, OR). Colonies were identified as monocytes (CD15lo, CD14hi) or granulocytes (CD15hi, CD14lo). For the analysis of intracellular myeloperoxidase (MPO), control and AML1-ETO transduced cultures were purified by cell sorting based on GFP positivity. Sorted cells were stained for MPO using Fix & Perm® (Caltag, Towcester, U.K.) according to the manufacturer’s instructions in combination with a PE conjugated antibody to MPO (Dako). All reactions were controlled with the appropriate isotype-matched irrelevant antibody. Incubations were carried out at 4oC for 30 minutes in the presence of 0.5% human gamma globulin (Sigma). Reagent concentrations were as recommended by the manufacturer. Data acquisition and analysis is described below. Data analysis Flow cytometric data (acquired using a FACSCalibur® cytometer, BD) were analysed using WinMDI (Joe Trotter, Pharmingen, San Diego, CA). The threshold for GFP positivity was determined from the autofluorescence of GFP negative cells in mock transduced cultures; for antibody labelled cells, this was determined from control stained cells (in each case, set to 95% of controls). Significance of difference was tested using the Students t-test. Minitab software version 12.0 (Minitab Inc, State College, PA) was used for all analyses.