Text (Table S2)
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Supplemental Table S2. IL1β-responsive RNAs were clustered according to the time for maximal upregulation (clusters 1-3) or downregulation (clusters 4-6). Each cluster was then interrogated for IL33-responsive RNAs. Graphs for each cluster are shown in Fig. 2, A and B. Cluster 1 Gene symbol IL1β and IL33 Btg2 Dusp1 Egr1 Egr2 Fos FosB Gdf15 Ier2 Ier3 B-cell translocation gene 2, anti-proliferative Dual specificity phosphatase 1 Early growth response 1 Early growth response 2 FBJ murine osteosarcoma viral oncogene homolog FBJ osteosarcoma oncogene B Growth differentiation factor 15 Immediate early response 2 Immediate early response 3 Transcriptional regulation Signalling Transcriptional regulation Transcriptional regulation Transcriptional regulation Transcriptional regulation Agonists/Receptors Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Jun Junb Tnf Zfp36 Jun oncogene Jun-B oncogene Tumor necrosis factor (TNF superfamily, member 2) Zinc finger protein 36 Transcriptional regulation Transcriptional regulation Agonists/Receptors Transcriptional regulation 1386994_at, 1386995_at 1368146_at, 1368147_at 1368321_at 1387306_a_at, 1398266_a_at 1375043_at 1373759_at 1370153_at 1372389_at 1388587_at 1369788_s_at, 1374404_at, 1389528_s_at 1387788_at 1387691_at, 1391384_at 1387870_at Adrenomedullin AS to basic helix-loop-helix family, member e40 AS to Pim-1 kinase AS to Rho family GTPase 3 Activating transcription factor 3 AXIN1 up-regulated 1 Cholesterol 25-hydroxylase Chemokine (C-X-C motif) ligand 1 Chemokine (C-X-C motif) ligand 2 Cysteine rich protein 61 Coagulation factor III Forkhead box C2 Interleukin 6 Intron to GTP cyclohydrolase 1 Interferon regulatory factor 1 Nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha Solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 Tumor necrosis factor, alpha-induced protein 3 Agonists/Receptors Non-protein coding/potential AS sequences Non-protein coding/potential AS sequences Non-protein coding/potential AS sequences Transcriptional regulation Signalling Regulation of metabolism Agonists/Receptors Agonists/Receptors Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Protein synthesis, modification, trafficking Transcriptional regulation Agonists/Receptors Sequences in introns Transcriptional regulation 1387219_at 1379483_at 1374429_at 1386062_at 1369268_at 1389402_at 1380063_at 1387316_at 1368760_at 1368290_at 1369182_at 1370795_at 1369191_at 1380230_at 1368073_at Transcriptional regulation 1389538_at Channels, pumps, transporters Transcriptional regulation 1371754_at 1385641_at IL1β and IL33a Adm AS to Bhlhe40 AS to Pim1 AS to Rnd3 Atf3 Axud1 Ch25h Cxcl1 Cxcl2 Cyr61 F3 Foxc2 Il6 Intron to Gch Irf1 Nfkbia Slc25a25 Tnfaip3 Gene name Functional classification IL1β only 1 Probeset Adamts1 AS to Srpk3 Ccnl1 Chac1 Cxcl10 Ddit4 Dusp2 Gem Ifrd1 Intron to Anxa1 Intron to Arf4 Intron to Bhlhe40 Intron to Ddit3 Intron to Lamc1 Intron to March7 Intron to Mbnl2 Intron to Rarb Intron to Ssfa2 Klf6 Mirnlet7i Naf1 Plk2 Ppp1r15a Rasd1 Rasl11b Sgk1 Spry1 Spry2 Taf1a Unknown Unknown Unknown Zfp36l1 Zfp36l2 A disintegrin-like and metallopeptidse (reprolysin type) with thrombospondin type 1 motif, 1 AS to SFRS protein kinase 3 Cyclin L1 ChaC, cation transport regulator-like 1 Chemokine (C-X-C motif) ligand 10 DNA-damage-inducible transcript 4 Dual specificity phosphatase 2 GTP binding protein (gene overexpressed in skeletal muscle) Interferon-related developmental regulator 1 Intron to annexin A1 Intron to ADP-ribosylation factor 4 Intron to basic helix-loop-helix family, member e40 Intron to DNA-damage inducible transcript 3 Intron to laminin, gamma 1 (Lamc1) Intron to membrane-associated ring finger (C3HC4) 7 Intron to muscleblind-like 2 Intron to retinoic acid receptor, b.5eta Intron to sperm specific antigen 2 Kruppel-like factor 6 MicroRNA let7i Nuclear assembly factor 1 homolog (S. cerevisiae) Polo-like kinase 2 (Drosophila) Protein phosphatase 1, regulatory (inhibitor) subunit 15A RAS, dexamethasone-induced 1 RAS-like family 11 member B Serum/glucocorticoid regulated kinase 1 Sprouty homolog 1 Sprouty homolog 2 TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A Unknown Unknown Unknown Zinc finger protein 36, C3H type-like 1 Zinc finger protein 36, C3H type-like 2 Protein synthesis, modification, trafficking Non-protein coding/potential AS sequences Signalling Channels, pumps, transporters Agonists/Receptors Signalling Signalling Signalling Transcriptional regulation Sequences in introns Sequences in introns Sequences in introns Sequences in introns Sequences in introns Sequences in introns Sequences in introns Sequences in introns Sequences in introns Transcriptional regulation Non-protein coding/potential AS sequences DNA/RNA regulation Signalling Hypothetical proteins/proteins with no known function Signalling Signalling Signalling Signalling Signalling Transcriptional regulation Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene DNA/RNA regulation Transcriptional regulation 2 1368223_at 1386320_at 1368050_at 1389573_at 1387969_at 1368025_at 1377023_at 1382351_at 1367795_at 1394451_at 1381498_at 1381121_at 1376178_at 1396877_at 1381651_at 1392026_at 1377317_at 1380701_at 1387060_at, 1395557_at 1378540_at 1379494_at 1368106_at 1370174_at 1387908_at 1383322_at 1367802_at 1379380_at 1374864_at 1383889_at 1384574_at 1397915_at 1368737_at 1369959_at 1373106_at Cluster 2 Gene symbol IL1β and IL33 Bdkrb1 Ccrn4l Egr3 Ereg Errfi1 Fosl1 Has2 Kdm6b Lif Lincr Maff Gene name Functional classification Probeset Agonists/Receptors Transcriptional regulation Transcriptional regulation Agonists/Receptors Signalling Transcriptional regulation Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Transcriptional regulation Agonists/Receptors Hypothetical proteins/proteins with no known function Transcriptional regulation 1369807_at 1377869_at 1392791_at 1369587_at, 1385150_at 1373093_at 1368489_at 1387548_at 1375866_at 1368804_at, 1393728_at 1383906_at 1380229_at Nfkbiz Nr4a1 Nr4a3 Phlda1 Ptgs2 Serpine1 Sowahc Bradykinin receptor B1 Carbon catabolite repression 4 protein homolog Early growth response 3 Epiregulin ERBB receptor feedback inhibitor 1 Fos-like antigen 1 Hyaluronan synthase 2 KDM1 lysine (K)-specific demethylase 6B Leukemia inhibitory factor Lung inducible neuralized-related C3HC4 RING finger protein v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta Nr4a1 Nuclear receptor subfamily 4, group A, member 3 Pleckstrin homology-like domain, family A, member 1 Prostaglandin-endoperoxide synthase 2 Serine (or cysteine) peptidase inhibitor, clade E, member 1 Sosondowah ankyrin repeat domain family member C Transcriptional regulation Transcriptional regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Regulation of metabolism Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Tnfaip2 Tumor necrosis factor, alpha-induced protein 2 Hypothetical proteins/proteins with no known function 1378032_at 1386935_at 1369067_at, 1393389_at 1368860_at 1368527_at 1368519_at, 1392264_s_at 1386065_at 1375806_at, 1381376_at, 1388773_at AT rich interactive domain 5A (Mrf1 like) ADP-ribosylation factor-like 5B Arrestin domain containing 3 AS to zinc finger protein 281 Basic helix-loop-helix family, member e40 Chemokine (C-C motif) receptor-like 2 Cell division cycle 20 homolog (S. cerevisiae) CCAAT/enhancer binding protein (C/EBP), beta Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 Coenzyme Q10 homolog B Colony stimulating factor 1 Early B-cell factor 1 Family with sequence similarity 110, member A Fos-like antigen 2 Folylpolyglutamate synthase Intron to FYVE, RhoGEF and PH domain containing 6 Intron to microtubule associated serine/threonine kinase family member 4 Intron to PCTAIRE-motif protein kinase 2 Transcriptional regulation Signalling Hypothetical proteins/proteins with no known function Non-protein coding/potential AS sequences Transcriptional regulation Agonists/Receptors Protein synthesis, modification, trafficking Transcriptional regulation 1379311_at 1376275_at 1389230_at, 1394948_at 1385870_at 1369415_at 1398591_at 1389506_x_at 1387087_at Transcriptional regulation Regulation of metabolism Agonists/Receptors Transcriptional regulation Hypothetical proteins/proteins with no known function Transcriptional regulation Regulation of metabolism Sequences in introns Sequences in introns Sequences in introns 1367601_at, 1367602_at 1373866_at 1379631_at, 1380583_s_at 1392619_at 1383295_at 1373035_at 1389380_at 1397223_at 1396378_at 1397112_at IL1β only Arid5a Arl5b Arrdc3 AS to Zfp281 Bhlhe40 Ccrl2 Cdc20 Cebpb Cited2 Coq10b Csf1 Ebf1 Fam110a Fosl2 Fpgs Intron to Fgd6 Intron to Mast4 Intron to Pctk2 3 Itpkc Jmjd3 Lhfpl2 LOC500300 Map3k6 Mctp2 Nab2 Nr4a2 Nuak2 Olr1 Pde4b Pnrc1 RGD1564664 Rnd3 Skil Snf1lk Srxn1 Ssfa2 Taf3 Tifa Trib1 Unknown Unknown Unknown Vof16 Zc3h12c Zfand5 Inositol 1,4,5-trisphosphate 3-kinase C Jumonji domain containing 3 Lipoma HMGIC fusion partner-like 2 Similar to hypothetical protein MGC6835 Mitogen-activated protein kinase kinase kinase 6 Multiple C2 domains, transmembrane 2 Ngfi-A binding protein 2 Nr4a2 NUAK family, SNF1-like kinase, 2 Oxidized low density lipoprotein (lectin-like) receptor 1 Phosphodiesterase 4B, cAMP specific Proline-rich nuclear receptor coactivator 1 Similar to LOC387763 protein Rho family GTPase 3 SKI-like SNF1-like kinase Sulfiredoxin 1 homolog (S. cerevisiae) Sperm specific antigen 2 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor TRAF-interacting protein with forkhead-associated domain Tribbles homolog 1 (Drosophila) Unknown Unknown Unknown Ischemia related factor vof-16 Zinc finger CCCH-type containing 12C Zinc finger, AN1-type domain 5 4 Signalling Hypothetical proteins and proteins with no known function Hypothetical proteins and proteins with no known function Hypothetical proteins and proteins with no known function Signalling Hypothetical proteins and proteins with no known function Transcriptional regulation Transcriptional regulation Signalling Agonists/Receptors Signalling Transcriptional regulation Hypothetical proteins and proteins with no known function Signalling Transcriptional regulation Signalling Regulation of metabolism Cyoskeleton and myofibrillar apparatus 1373623_at 1390000_at 1373233_at, 1378179_a_at 1372213_at 1378552_at 1397718_at 1374925_at 1369007_at 1383614_at 1368683_at 1369044_a_at, 1374157_at 1370381_at 1381923_at 1377663_at 1372347_at 1368596_at 1372510_at, 1384331_at 1377595_at Transcriptional regulation Hypothetical proteins and proteins with no known function Signalling Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Hypothetical proteins and proteins with no known function Hypothetical proteins and proteins with no known function Hypothetical proteins and proteins with no known function 1382484_at 1382311_at 1391643_at 1373679_at 1384892_at 1395716_at 1377778_at 1391217_at 1388868_at Cluster 3 Gene symbol IL1β and IL33 Aldh1a3 Angptl4 AS to Tnfaip6 Ass1 Bcl3 Bcl6 Bcr Bdkrb2 Birc3 Cdkn2b Cish Cx3cl1 Gene name Functional classification Aldehyde dehydrogenase 1 family, member A3 Angiopoietin-like 4 AS to Tumor necrosis factor alpha induced protein 6 Argininosuccinate synthetase 1 B-cell leukemia/lymphoma 3 B-cell leukemia/lymphoma 6 Breakpoint cluster region Bradykinin receptor, beta 2 Baculoviral IAP repeat-containing 3 Cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) Cytokine inducible SH2-containing protein Chemokine (C-X3-C motif) ligand 1 Regulation of metabolism Agonists/Receptors Non-protein coding/potential AS sequences Regulation of metabolism Transcriptional regulation Transcriptional regulation Signalling Agonists/Receptors Protein synthesis, modification, trafficking Signalling Signalling Agonists/Receptors Cxcl3 Cxcl6 Darc Fas Fst Gbp2 Icam1 Inhba Intron to Mast4 Jak2 Lipg Chemokine (C-X-C motif) ligand 3 Chemokine (C-X-C motif) ligand 6 Duffy blood group, chemokine receptor Fas (TNF receptor superfamily, member 6) Follistatin Guanylate nucleotide binding protein 2 Intercellular adhesion molecule 1 Inhibin beta-A Intron to microtubule associated serine/threonine kinase family member 4 Janus kinase 2 Lipase, endothelial Agonists/Receptors Agonists/Receptors Agonists/Receptors Agonists/Receptors Agonists/Receptors Signalling Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Agonists/Receptors Sequences in introns Signalling Regulation of metabolism LOC363060 Map3k8 Mmp3 Nfkb1 Nog Nos2 Plscr1 Ptges Rdh10 Relb Rgs2 Ripk2 Rnd1 Sele Selp Serpinb2 Slamf7 Slfn2 Similar to RIKEN cDNA 1600029D21 Mitogen-activated protein kinase kinase kinase 8 Matrix metallopeptidase 3 Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105 Noggin Nitric oxide synthase 2, inducible, macrophage Phospholipid scramblase 1 Prostaglandin E synthase Retinol dehydrogenase 10 (all-trans) Avian reticuloendotheliosis viral (v-rel) oncogene related B Regulator of G-protein signaling 2 Receptor (TNFRSF)-interacting serine-threonine kinase 2 Rho family GTPase 1 Selectin, endothelial cell Selectin, platelet Serine (or cysteine) proteinase inhibitor, clade B, member 2 SLAM family member 7 Schlafen 2 Hypothetical proteins/proteins with no known function Signalling Protein synthesis, modification, trafficking Transcriptional regulation Agonists/Receptors Regulation of metabolism Regulation of metabolism Regulation of metabolism Regulation of metabolism Transcriptional regulation Signalling Signalling Signalling Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Protein synthesis, modification, trafficking Agonists/Receptors Hypothetical proteins/proteins with no known function 5 Probeset 1383469_at 1388924_at 1371193_at 1370964_at 1385627_at, 1398482_at 1379368_at 1373494_at, 1389465_at 1370650_s_at 1370113_at 1369193_at 1378586_at 1368200_at 1370633_at, 1370634_x_at, 1388032_a_at 1387648_at 1393250_at 1384842_s_at 1372750_at, 1387843_at 1368332_at 1387202_at 1369012_at, 1383486_at 1379114_at 1368856_at, 1380110_at 1390790_a_at 1374594_at, 1395887_at, 1397729_x_at 1369393_at 1368657_at 1370968_at 1371052_at 1387667_at 1369029_at 1368014_at, 1368015_at 1373923_at 1376160_at 1368144_at 1381279_at, 1394527_at 1381533_at 1388018_at 1391946_at 1368487_at 1398703_at 1377916_at Socs3 Tfpi2 Tlr2 Tnc Tnfaip6 Signalling Protein synthesis, modification, trafficking Agonists/Receptors Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Cell-cell/cell-matrix adhesion/interaction, extracellular matrix 1369584_at, 1377092_at 1377340_at 1392280_at 1373401_at 1371194_at Tnfrsf11b Trpc6 Tslp Uap1 Unknown Suppressor of cytokine signaling 3 Tissue factor pathway inhibitor 2 Toll-like receptor 2 Tenascin C Tumor necrosis factor alpha induced protein 6 Tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) Transient receptor potential cation channel, subfamily C, member 6 Thymic stromal lymphopoietin UDP-N-acetylglucosamine pyrophosphorylase 1 Unknown Agonists/Receptors Channels, pumps, transporters Agonists/Receptors Regulation of metabolism Sequences associated with no established gene 1369407_at 1370139_a_at 1381070_at 1379910_at 1378783_at IL1β and IL33a Arl5c Bmp2 Ccl20 Ccl7 Cd274 Csf2 Csf3 Intron to Mgp Irak2 Mirn221 Ngf Rgs1 Rgs16 Zc3h12a ADP-ribosylation factor-like 5C Bone morphogenetic protein 2 Chemokine (C-C motif) ligand 20 Chemokine (C-C motif) ligand 7 CD274 antigen Colony stimulating factor 2 (granulocyte-macrophage) Colony stimulating factor 3 Intron to Mgp Interleukin-1 receptor-associated kinase 2 MicroRNA 221 nerve growth factor (beta polypeptide) Regulator of G-protein signaling 1 Regulator of G-protein signaling 16 Zinc finger CCCH type containing 12A Signalling Agonists/Receptors Agonists/Receptors Agonists/Receptors Agonists/Receptors Agonists/Receptors Agonists/Receptors Sequences in introns Signalling Non-protein coding/potential AS sequences Agonists/Receptors Signalling Signalling Hypothetical proteins/proteins with no known function 1377110_at 1368945_at, 1398270_at 1369814_at 1379935_at 1382603_at 1371228_at 1369529_at 1392578_at 1383474_at 1378867_at 1371259_at 1398540_at 1373777_at 1393140_at IL1β only Abcb1b Adamts4 ATP-binding cassette, sub-family B (MDR/TAP), member 1B A disintegrin and metallopeptidase with thrombospondin motifs 4 Channels, pumps, transporters Protein synthesis, modification, trafficking Akap2 Arid5b Arrdc4 AS to Myo10 AS to Ptgs2 A kinase (PRKA) anchor protein 2 AT rich interactive domain 5B (Mrf1 like) Arrestin domain containing 4 AS to myosin X AS to Prostaglandin endoperoxide synthase 2 Signalling Transcriptional regulation Hypothetical proteins/proteins with no known function Non-protein coding/potential AS sequences Non-protein coding/potential AS sequences Atp2b1 Atp8b1 Bach1 Baz1a Bcl10 Bhlhe41 Bid Birc2 Cand1 ATPase, Ca++ transporting, plasma membrane 1 ATPase, Class I, type 8B, member 1 BTB and CNC homology 1 Bromodomain adjacent to zinc finger domain 1A B-cell CLL/lymphoma 10 Basic helix-loop-helix family, member e41 BH3 interacting domain death agonist Baculoviral IAP repeat-containing 2 Cullin associated and neddylation disassociated 1 Channels, pumps, transporters Channels, pumps, transporters Transcriptional regulation Transcriptional regulation Signalling Transcriptional regulation Signalling Protein synthesis, modification, trafficking Transcriptional regulation 1370583_s_at 1393730_at 1373843_at, 1382206_a_at, 1385566_at 1382312_at 1391808_at 1376848_at 1375986_at 1370050_at, 1374702_at, 1386426_at, 1397030_at 1378134_at, 1391693_at 1374433_at 1385853_at 1368118_at 1368511_at 1369683_at, 1377759_at 1368291_at 1391486_at 6 Cd44 Cdc42ep2 Cdc42ep4 Cebpd Cflar Chsy1 Chsy3 Cks2 Crem Cyp7b1 Dtx2 Efnb2 Enc1 Epas1 Esm1 Etf1 Fam110c Fam126b Gadd45b Gbp6 Gch Gclc Gcnt2 Gda Gfpt2 Gnl3 Hif1a Hivep1 Hivep2 Hs3st3b1 Il1rl1 Intron to Atp2b1 Intron to Cflar Intron to Myo1g Intron to Ppp2r2a Intron to RGD1307235 Intron to Rpsa Intron to Spag9 Irak3 Itga5 Jarid2 Kctd5 Kitlg CD44 antigen CDC42 effector protein (Rho GTPase binding) 2 CDC42 effector protein (Rho GTPase binding) 4 CCAAT/enhancer binding protein (C/EBP), delta CASP8 and FADD-like apoptosis regulator Chondroitin sulfate synthase 1 Chondroitin sulfate synthase 3 CDC28 protein kinase regulatory subunit 2 cAMP responsive element modulator Cytochrome P450, family 7, subfamily b, polypeptide 1 Deltex 2 homolog (Drosophila) Ephrin B2 Ectodermal-neural cortex 1 Endothelial PAS domain protein 1 Endothelial cell-specific molecule 1 Eukaryotic translation termination factor 1 Family with sequence similarity 110, member C Family with sequence similarity 126, member B Growth arrest and DNA-damage-inducible 45 beta Guanylate binding protein 6 GTP cyclohydrolase 1 Glutamate-cysteine ligase, catalytic subunit Glucosaminyl (N-acetyl) transferase 2, I-branching enzyme Guanine deaminase Glutamine-fructose-6-phosphate transaminase 2 Guanine nucleotide binding protein-like 3 (nucleolar) Hypoxia inducible factor 1, alpha subunit Human immunodeficiency virus type I enhancer binding protein 1 Human immunodeficiency virus type I enhancer binding protein 2 Heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 Interleukin 1 receptor-like 1 Intron to ATPase, Ca++ transporting, plasma membrane 1 (Atp2b1) Intron to CASP8 and FADD-like apoptosis regulator Intron to myosin IG Intron to protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Signalling Signalling Transcriptional regulation Signalling Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Signalling Transcriptional regulation Regulation of metabolism Protein synthesis, modification, trafficking Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Cyoskeleton and myofibrillar apparatus Transcriptional regulation Agonists/Receptors Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling Signalling Regulation of metabolism Regulation of metabolism Protein synthesis, modification, trafficking Regulation of metabolism Regulation of metabolism Signalling Transcriptional regulation Transcriptional regulation Transcriptional regulation Protein synthesis, modification, trafficking Agonists/Receptors Sequences in introns Sequences in introns Sequences in introns 1368921_a_at, 1387952_a_at, 1390659_at 1389145_at 1388730_at 1387343_at 1368545_at, 1391811_at 1374537_at 1386783_at 1373823_at 1369737_at, 1378925_at 1388188_at 1374564_at 1383353_at 1384687_at, 1388666_at 1398333_at 1368078_at 1373917_at 1385251_at 1385108_at 1372016_at 1382950_at 1373513_at 1372523_at 1374903_at 1372011_at, 1387659_at 1377761_at 1388953_at 1387076_at 1391560_at 1368546_at 1383661_at 1387273_at 1380195_at 1392386_at 1376098_a_at Sequences in introns 1376938_at Intron to RGD1307235 Intron to ribosomal protein SA Intron to sperm associated antigen 9 (Spag9) Interleukin-1 receptor-associated kinase 3 Integrin alpha 5 (mapped) Sequences in introns Sequences in introns Sequences in introns Signalling Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Jumonji, AT rich interactive domain 2 Potassium channel tetramerisation domain containing 5 Kit ligand Transcriptional regulation Channels, pumps, transporters Agonists/Receptors 1394925_at 1393797_at 1382020_at 1380336_at 1385649_at 1383382_at, 1384390_at, 1389984_at 1397764_at 1388856_at 7 LOC687992 Mapk6 March3 Marcksl1 Mreg Msx1 Myc Mycn Myo10 N4bp1 Neat1 Nfil3 Nfkb2 Nop58 Nrp2 Nup153 Opn3 P2ry2 Pctk2 Pdgfa Plscr2 Polr1e Ppap2b Prdm1 Ptpn1 Ptpn12 PVR Rab32 Rarb RasGrp1 Rassf4 Rcl1 Rela RGD1309095 Rgs4 Rhob Rhou Rnf125 Rnf19b Rrs1 Runx1 Samd4 Samd4a Sat Sdc1 Sdc4 Similar to Serum amyloid A-3 protein precursor Mitogen-activated protein kinase 6 Membrane-associated ring finger (C3HC4) 3 MARCKS-like 1 Melanoregulin Msh homeobox 1 Myelocytomatosis viral oncogene homolog v-myc myelocytomatosis viral related oncogene, neuroblastoma derived Myosin X Nedd4 binding protein 1 Nuclear paraspeckle assembly transcript 1 (non-protein coding) Nuclear factor, interleukin 3 regulated Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 NOP58 ribonucleoprotein homolog (yeast) Neuropilin 2 Nucleoporin 153 Opsin 3 Purinergic receptor P2Y, G-protein coupled 2 PCTAIRE-motif protein kinase 2 Platelet derived growth factor, alpha Phospholipid scramblase 2 Polymerase (RNA) I polypeptide E Phosphatidic acid phosphatase type 2B PR domain containing 1, with ZNF domain Protein tyrosine phosphatase, non-receptor type 1 Protein tyrosine phosphatase, non-receptor type 12 Poliovirus receptor RAB32, member RAS oncogene family Retinoic acid receptor, beta RAS guanyl releasing protein 1 Ras association (RalGDS/AF-6) domain family 4 RNA terminal phosphate cyclase-like 1 v-rel reticuloendotheliosis viral oncogene homolog A Similar to hypothetical protein BC015148 Regulator of G-protein signaling 4 Ras homolog gene family, member B Ras homolog gene family, member U Ring finger protein 125 Ring finger protein 19B RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) Runt related transcription factor 1 Sterile alpha motif domain containing 4 Sterile alpha motif domain containing 4A Spermidine/spermine N1-acetyl transferase Syndecan 1 Syndecan 4 8 Hypothetical proteins/ proteins with no known function Signalling Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Transcriptional regulation Transcriptional regulation Transcriptional regulation Cyoskeleton and myofibrillar apparatus Protein synthesis, modification, trafficking Non-protein coding/potential AS sequences Transcriptional regulation 1392647_at 1368273_at 1384285_at 1369944_at 1379376_at 1368302_at 1368308_at 1376648_at 1393639_at 1390859_at, 1391222_at 1371595_at 1368488_at Transcriptional regulation Protein synthesis, modification, trafficking Agonists/Receptors Cyoskeleton and myofibrillar apparatus Agonists/Receptors Agonists/Receptors Signalling Agonists/Receptors Regulation of metabolism Transcriptional regulation Signalling Transcriptional regulation Signalling Signalling Agonists/Receptors Signalling Transcriptional regulation Signalling Signalling Protein synthesis, modification, trafficking Transcriptional regulation Hypothetical proteins/proteins with no known function Signalling Signalling Signalling Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Protein synthesis, modification, trafficking Transcriptional regulation DNA/RNA regulation Protein synthesis, modification, trafficking Regulation of metabolism Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Cell-cell/cell-matrix adhesion/interaction, extracellular matrix 1375989_a_at 1368173_at 1382995_at 1370934_at 1393373_at 1368940_at 1382345_at 1370427_at, 1379375_at 1372725_at 1376001_at 1370950_at, 1372101_at 1390221_at 1368645_at, 1397916_s_at 1382154_at 1370177_at 1383786_at, 1390866_at 1376755_at 1383542_at 1374284_at, 1378321_at 1373452_at 1372853_at 1384252_at 1368505_at 1369958_at 1389500_at 1382404_at, 1384098_at 1382074_at 1376065_at 1368914_at, 1395442_at 1383939_at 1398620_at 1371774_at 1367849_at 1367721_at Sec24a Sestd1 Slc25a37 Slc2a3 Slc4a7 Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Channels, pumps, transporters Channels, pumps, transporters Channels, pumps, transporters 1389383_at 1388991_at 1374845_at 1372326_at 1369160_a_at, 1379739_at Channels, pumps, transporters Protein synthesis, modification, trafficking Transcriptional regulation Protein synthesis, modification, trafficking Regulation of metabolism Transcriptional regulation Hypothetical proteins/proteins with no known function Signalling Transcriptional regulation Transcriptional regulation Protein synthesis, modification, trafficking Protein synthesis, modification, trafficking 1378927_at 1367998_at 1389127_at 1390298_at 1370173_at, 1379371_at 1384415_at 1373554_at, 1379611_at 1391871_at 1370224_at, 1371781_at 1368231_at 1380981_at 1379732_at Taf4b Tgif1 Thbs1 Thoc4 Timp1 Tm9sf3 Sec24 related gene family, member A SEC14 and spectrin domains 1 Solute carrier family 25, member 37 Solute carrier family 2 (facilitated glucose transporter), member 3 Solute carrier family 4, sodium bicarbonate cotransporter, member 7 Solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 Secretory leukocyte peptidase inhibitor MAD homolog 3 (Drosophila) Sorting nexin associated golgi protein 1 Superoxide dismutase 2, mitochondrial SRY (sex determining region Y)-box 7 SplA/ryanodine receptor domain and SOCS box containing 1 START domain containing 13 Signal transducer and activator of transcription 3 Signal transducer and activator of transcription 5A Stonin 2 Syntaxin 11 TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor TG interacting factor 1 Thrombospondin 1 THO complex 4 Tissue inhibitor of metallopeptidase 1 Transmembrane 9 superfamily member 3 Transcriptional regulation Transcriptional regulation Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Transcriptional regulation Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Tmed5 Tmem2 Tmem26 Tnip1 Traf5 Ttyh2 Ugdh Unknown Unknown Unknown Unknown Unknown Upp1 Vcam1 Transmembrane emp24 protein transport domain containing 5 Transmembrane protein 2 Transmembrane protein 26 TNFAIP3 interacting protein 1 TNF receptor-associated factor 5 Tweety homolog 2 (Drosophila) UDP-glucose dehydrogenase Unknown Unknown Unknown Unknown Unknown (multihit) Uridine phosphorylase 1 Vascular cell adhesion molecule 1 Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling Channels, pumps, transporters Regulation of metabolism Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Regulation of metabolism Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Vcan Vps37c Wdr43 Zfp281 Zfp697 Zhx2 Versican Vacuolar protein sorting 37C WD repeat domain 43 Zinc finger protein 281 Zinc finger protein 697 Zinc fingers and homeoboxes 2 Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Protein synthesis, modification, trafficking Hypothetical proteins/proteins with no known function Transcriptional regulation Transcriptional regulation Transcriptional regulation 1382215_at 1373421_at 1374529_at, 1394109_at 1383660_at 1367712_at 1371647_at 1375904_at, 1379429_at, 1398553_at 1394160_at 1395055_at 1388492_at 1377169_at 1384238_at 1367938_at 1376330_at 1377117_at 1383993_at 1384562_at 1392598_at 1372691_at 1368474_at 1371232_a_at, 1388054_a_at, 1388142_at, 1388265_x_at 1376680_at 1382679_at 1382642_at 1373680_at 1384217_at Slc7a2 Slp1 Smad3 Snag1 Sod2 Sox7 Spsb1 Stard13 Stat3 Stat5a Ston2 Stx11 9 Cluster 4 Gene symbol IL1β only Intron to Lysmd4 Intron to Lysmd4 Intron to Slc33a1 Kdm5c Unknown Unknown Unknown Unknown Unknown Vps26b Zbtb24 Znf688 Gene name Functional classification Intron to LysM, putative peptidoglycan-binding, domain containing 4 Intron to LysM, putative peptidoglycan-binding, domain containing 4 Intron to solute carrier family 33 (acetyl-CoA transporter), member 1 Lysine (K)-specific demethylase 5C Unknown Unknown (multihit) Unknown Unknown Unknown Vacuolar protein sorting 26 homolog B (S. pombe) Zinc finger and BTB domain containing 24 Zinc finger protein 688 Sequences in introns Sequences in introns Sequences in introns Transcriptional regulation Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Protein synthesis, modification, trafficking Transcriptional regulation Transcriptional regulation 10 Probeset 1379453_a_at 1379454_at 1392317_at 1393093_at 1374803_at 1383058_at 1385506_at 1390735_at 1391863_at 1376464_at 1385358_at 1389445_at Cluster 5 Gene symbol IL1β and IL33 Nudt11 Rbak Unknown Znf124 IL1β only Amph Armc7 Fastkd3 Gin1 Ier5l Intron to Sema 6a Kidins220 Klhl6 Lin9 LOC680200 Lsm1 MGC72974 Ndufv3 P2ry5 Ptger4 Pygl RGD1304610 RGD1307396 Rhobtb1 Snai1 Sos1 Taf9b Tmem140 Trim59 Unkl Unknown Zfp161 Zfp329 Zfp61 Zscan12 Gene name Functional classification Probeset Nudix (nucleoside diphosphate linked moiety X)-type motif 11 RB-associated KRAB zinc finger Unknown Zinc finger protein 124 (HZF-16) Regulation of metabolism Transcriptional regulation Sequences associated with no established gene Transcriptional regulation 1385014_at 1384937_at 1395898_at 1385597_at Amphiphysin Armadillo repeat containing 7 FAST kinase domains 3 Gypsy retrotransposon integrase 1 Immediate early response 5-like Intron to sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A Kinase D-interacting substrate 220 Kelch-like 6 (Drosophila) Lin-9 homolog (C. elegans) Similar to zinc finger protein 455 LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) Hypothetical LOC316976 NADH dehydrogenase (ubiquinone) flavoprotein 3 Purinergic receptor P2Y, G-protein coupled, 5 Prostaglandin E receptor 4 (subtype EP4) Phosphorylase, glycogen, liver Similar to DNA segment, Chr 14, ERATO Doi 436, expressed Similar to RIKEN cDNA 6330406I15 Rho-related BTB domain containing 1 Snail homolog 1 Son of sevenless homolog 1 TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor Transmembrane protein 140 Tripartite motif-containing 59 Unkempt-like Unknown Zinc finger protein 161 Zinc finger protein 329 Zinc finger protein 61 Zinc finger and SCAN domain containing 12 Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling DNA/RNA regulation Hypothetical proteins/proteins with no known function 1393000_at 1383246_at 1384011_a_at 1394095_at 1389675_at, 1391026_at Sequences in introns Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function DNA/RNA regulation Transcriptional regulation DNA/RNA regulation Hypothetical proteins/proteins with no known function Regulation of metabolism Agonists/Receptors Agonists/Receptors Regulation of metabolism Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling Transcriptional regulation Signalling 1392795_at 1392949_at 1377153_a_at 1385765_at 1376983_at 1385487_at 1376200_at 1368567_at 1377702_at 1393638_at 1368674_at 1385253_at 1376645_at 1389632_at 1373219_at 1390864_at Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Sequences associated with no established gene Transcriptional regulation Transcriptional regulation Transcriptional regulation Transcriptional regulation 1368429_at 1390042_at 1378592_at 1376492_at 1383977_a_at 1393153_at 1397467_at 1386793_at 1384432_at 11 Cluster 6 Gene symbol IL1β and IL33 Intron to Rgnef Mirn99a Pcdh18 Plag1 Prickle2 Rgc32 RGD1359127 Slbp Snai2 Tmcc3 Ttc30b Unknown Zfp395 Gene name Functional classification Probeset Intron to Rho-guanine nucleotide exchange factor MicroRNA 99a Protocadherin 18 Pleiomorphic adenoma gene 1 Prickle homolog 2 (Drosophila) Response gene to complement 32 Similar to RIKEN cDNA 2310011J03 Stem-loop binding protein Snail homolog 2 (Drosophila) Transmembrane and coiled coil domains 3 Tetratricopeptide repeat domain 30B Unknown Zinc finger protein 395 Sequences in introns Non-protein coding/potential AS sequences Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Transcriptional regulation Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function DNA/RNA regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Sequences associated with no established gene Hypothetical proteins/proteins with no known function 1385205_at 1384824_at 1374259_at 1386653_at, 1390156_a_at 1368080_at 1397579_x_at 1395322_at 1383589_at 1390832_at, 1393822_at 1378324_at 1392935_at 1390148_a_at 1385205_at Alkaline ceramidase 2 A disintegrin and metallopeptidase domain 19 (meltrin beta) Anaphase promoting complex subunit 4 Apelin receptor Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 Rho GTPase activating protein 29 Rho guanine nucleotide exchange factor (GEF) 15 Armadillo repeat containing, X-linked 1 AS to growth arrest specific 1 AS to hairy and enhancer of split 5 (Drosophila) AS to avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 Atonal homolog 8 UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 B-cell CLL/lymphoma 7A B-cell CLL/lymphoma 9-like Basic, immunoglobulin-like variable motif-containing protein Bcl2 modifying factor BTB (POZ) domain containing 3 Calcium activated nucleotidase 1 Chromobox homolog 6 CD200 receptor 1 Cytidine and dCMP deaminase domain containing 1 Cell division cycle associated 7 like Regulation of metabolism Protein synthesis, modification, trafficking Protein synthesis, modification, trafficking Agonists/Receptors 1373302_at, 1379846_at, 1391791_at 1385382_at 1381153_at 1379772_at Signalling Signalling Signalling Hypothetical proteins/proteins with no known function Non-protein coding/potential AS sequences Non-protein coding/potential AS sequences 1372754_at 1398397_at 1383844_at 1393051_at 1389905_at 1375713_at Non-protein coding/potential AS sequences Signalling Transcriptional regulation Protein synthesis, modification, trafficking Transcriptional regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function Regulation of metabolism Transcriptional regulation Agonists/Receptors Regulation of metabolism Transcriptional regulation 1392566_at 1392019_at 1373287_at 1396221_at 1391855_at 1384335_at 1381838_at 1374493_at 1381974_at, 1382478_at 1396446_at 1375307_at 1387745_at 1385329_at 1389755_at IL1β only Acer2 Adam19 Anapc4 Aplnr Appl2 Arhgap29 Arhgef15 Armcx1 AS to gas1 AS to HES5 AS to Maf Asap1 Atoh8 B3galt6 Bcl7a Bcl9l Bivm Bmf Btbd3 Cant1 Cbx6 Cd200r1 Cdadc1 Cdca7l 12 Cnnm3 Hypothetical proteins/proteins with no known function 1391270_at Ctdspl Cyclin M3 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like Signalling Cxcr4 Cxxc5 Dbp Ddr1 Depdc7 Dhrs3 Dtwd1 Ebf3 Efcab7 Eif2ak3 Erf Ezh1 Fam102b Fam110b Fam117a Fam176b Fam180a Fam78a Fance Fbxl4 Fgfr3 Fhod1 Fut4 Fzd7 G0s2 Gigyf1 Gli2 Gpr182 Hey1 Hic2 Htr2a Id3 Il15 Intron to Cstf3 Intron to Fabp3 Wnt2 Intron to Wnk2 Irf2bp Irs1 Kbtbd7 Kcne3 Khdrbs1 Chemokine (C-X-C motif) receptor 4 CXXC finger 5 D site albumin promoter binding protein Discoidin domain receptor tyrosine kinase 1 DEP domain containing 7 Dehydrogenase/reductase (SDR family) member 3 DTW domain containing 1 Early B-cell factor 3 EF-hand calcium binding domain 7 Eukaryotic translation initiation factor 2 alpha kinase 3 Ets2 repressor factor Enhancer of zeste homolog 1 (Drosophila) Family with sequence similarity 102, member B Family with sequence similarity 110, member B Family with sequence similarity 117, member A Family with sequence similarity 176, member B Family with sequence similarity 180, member A Family with sequence similarity 78, member A Fanconi anemia, complementation group E F-box and leucine-rich repeat protein 4 Fibroblast growth factor receptor 3 Formin homology 2 domain containing 1 Fucosyltransferase 4 Frizzled homolog 7 G0/G1 switch gene 2 GRB10 interacting GYF protein 1 GLI-Kruppel family member GLI2 G protein-coupled receptor 182 Hairy/enhancer-of-split related with YRPW motif-like Hypermethylated in cancer 2 5-hydroxytryptamine (serotonin) receptor 2A Inhibitor of DNA binding 3 Interleukin 15 Intron to cleavage stimulation factor, 3' pre-RNA, subunit 3 Intron to fatty acid binding protein 3, muscle and heart Wingless-type MMTV integration site family member 2 Intron to WNK lysine deficient protein kinase 2 Interferon regulatory factor 2 binding protein 2 Insulin receptor substrate 1 Kelch repeat and BTB (POZ) domain containing 7 Potassium voltage-gated channel, Isk-related subfamily, gene 3 KH domain containing, RNA binding, signal transduction associated 1 Agonists/Receptors Hypothetical proteins/proteins with no known function Transcriptional regulation Agonists/Receptors Hypothetical proteins/proteins with no known function Regulation of metabolism Hypothetical proteins/proteins with no known function Transcriptional regulation Calcium binding Signalling Transcriptional regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function DNA/RNA regulation Protein synthesis, modification, trafficking Agonists/Receptors Cyoskeleton and myofibrillar apparatus Protein synthesis, modification/ trafficking Agonists/Receptors Hypothetical proteins/proteins with no known function Signalling Transcriptional regulation Agonists/Receptors Transcriptional regulation Transcriptional regulation Agonists/Receptors Transcriptional regulation Agonists/Receptors Sequences in introns Sequences in introns Agonists/Receptors Sequences in introns Transcriptional regulation Signalling Hypothetical proteins/proteins with no known function Channels, pumps, transporters Transcriptional regulation 1379238_at 1370097_a_at, 1373661_a_at, 1389244_x_at 1371629_at 1387874_at 1370216_at 1393612_a_at 1373240_at 1376612_at 1385173_at 1393922_at 1368326_at 1374055_at 1399059_at 1380696_at 1398425_at 1376177_at 1372621_at 1392510_at 1391741_a_at 1372994_at 1391005_at 1384056_at 1378477_a_at 1373838_at 1374530_at 1388395_at 1381469_a_at 1390233_at 1392664_at 1391969_at 1376400_at 1369125_at 1387769_a_at 1368375_a_at 1394996_at 1376522_at 1394361_a_at 1376280_at 1373566_at 1374060_at 1380466_at 1387160_at 1395583_at 13 Klf2 Kruppel-like factor 2 (lung) Transcriptional regulation Klf3 Klhdc5 Klhl21 Krba1 Kremen1 Ksr1 Ldb1 Lnx2 LOC499602 LOC689959 Lrrc10 Lrrc17 Lyn Lysmd4 Maf Mafb Maml3 Mdc1 Mettl7a Mex3b Mirn23b Mmgt2 Mmp11 Mtss1l Mum1 Narf Nr2f2 Nrarp Nrn1 Nynrin Obsl1 Opn4 Palm Parp8 Pcgf2 Pdgfrb Phf17 Phf21a Phlda3 Pik3ip1 Pitx2 Pla2g15 Plau Plcxd3 Kruppel-like factor 3 (basic) Kelch domain containing 5 Kelch-like 21 KRAB-A domain containing 1 Kringle containing transmembrane protein 1 Kinase suppressor of ras 1 LIM domain binding 1 Ligand of numb-protein X 2 Hypothetical protein LOC499602 Hypothetical protein LOC689959 Leucine-rich repeat-containing 10 Leucine rich repeat containing 17 v-yes-1 Yamaguchi sarcoma viral related oncogene homolog LysM, putative peptidoglycan-binding, domain containing 4 v-maf musculoaponeurotic fibrosarcoma oncogene homolog v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B Mastermind like 3 (Drosophila) Mediator of DNA damage checkpoint 1 Methyltransferase like 7A Mex3 homolog B MicroRNA 23b Membrane magnesium transporter 2 Matrix metallopeptidase 11 Metastasis suppressor 1-like Melanoma associated antigen (mutated) 1 Nuclear prelamin A recognition factor Nuclear receptor subfamily 2, group F, member 2 Notch-regulated ankyrin repeat protein Neuritin 1 NYN domain and retroviral integrase containing Obscurin-like 1 Opsin 4 (melanopsin) Paralemmin Poly (ADP-ribose) polymerase family, member 8 Polycomb group ring finger 2 Platelet derived growth factor receptor, beta polypeptide PHD finger protein 17 PHD finger protein 21A Pleckstrin homology-like domain, family A, member 3 Phosphoinositide-3-kinase interacting protein 1 Paired-like homeodomain transcription factor 2 phospholipase A2, group XV Plasminogen activator, urokinase Phosphatidylinositol-specific phospholipase C, X domain containing 3 Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Agonists/Receptors Signalling Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function Transcriptional regulation Transcriptional regulation Transcriptional regulation DNA/RNA regulation Regulation of metabolism Hypothetical proteins/proteins with no known function Non-protein coding/potential AS sequences Channels, pumps, transporters Protein synthesis, modification, trafficking Cytoskeleton/myofibrillar Hypothetical proteins/proteins with no known function Cyoskeleton and myofibrillar apparatus Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function DNA/RNA regulation Hypothetical proteins/proteins with no known function Agonists/Receptors Cyoskeleton and myofibrillar apparatus Protein synthesis, modification, trafficking Transcriptional regulation Agonists/Receptors Transcriptional regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Signalling Transcriptional regulation Regulation of metabolism Protein synthesis, modification, trafficking Signalling 14 1376569_at, 1386041_a_at, 1394068_x_at 1378332_at, 1389479_at, 1393150_at 1379615_at, 1380449_at 1371995_at 1375914_at 1369253_at 1379462_at 1371317_at 1383359_at 1390830_at 1375423_at 1389727_at 1395472_at 1382346_at 1372060_at 1385243_at, 1387165_at 1382108_at 1373726_at 1374927_at 1371479_at 1380682_at 1398020_at 1375430_at 1367858_at 1396057_at 1394409_at 1384009_at 1389554_at, 1389998_at 1375277_at, 1382138_at 1386969_at 1374023_at 1390139_a_at 1374302_at 1367649_at 1377970_at 1388962_at 1370642_s_at 1374636_at 1377674_at 1375224_at 1388525_at 1368785_a_at 1375034_at 1387675_at, 1398287_at 1376654_at Pml Ppp1r3c Promyelocytic leukemia Protein phosphatase 1, regulatory (inhibitor) subunit 3C Transcriptional regulation Signalling Prr12 Pxk Rassf6 Rcan3 Rerg RGD1304827 RGD1304931 RGD1304952 RGD1305464 RGD1306809 RGD1308093 RGD1309079 RGD1309821 RGD1310423 RGD1310552 RGD1563072 RGD1563510 RGD1566220 Rnf144a Rpp25 Proline rich 12 PX domain containing serine/threonine kinase Ras association (RalGDS/AF-6) domain family member 6 Regulator of calcineurin 3 RAS-like, estrogen-regulated, growth-inhibitor Hypothetical LOC316091 Similar to RIKEN cDNA 2310042D19 Similar to RIKEN cDNA C530028O21 gene Similar to human chromosome 15 open reading frame 39 Similar to hypothetical protein FLJ30596 Similar to FLJ00128 protein Similar to Ab2-095 Similar to KIAA1161 protein Similar to hypothetical protein FLJ31737 Similar to hypothetical protein MGC38960 Similar to hypothetical protein FLJ38984 Similar to RIKEN cDNA 8430427H17 gene Similar to hypothetical MGC48595 Ring finger protein 144A Ribonuclease P 25 subunit (human) Hypothetical proteins/proteins with no known function Signalling Signalling Signalling Signalling Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Protein synthesis, modification, trafficking Protein synthesis, modification, trafficking Runx1t1 Rwdd3 Senp7 Sept9 Sh2dc3 Sh3rf1 Shank3 Slc16a12 Slc29a3 Slc2a4 Runt-related transcription factor 1; translocated to, 1 (cyclin D-related) RWD domain containing 3 SUMO1/sentrin specific protease 7 Septin 9 SH2 domain containing 3C SH3 domain containing ring finger 1 SH3 and multiple ankyrin repeat domains 3 Solute carrier family 16 (monocarboxylic acid transporters), member 12 Solute carrier family 29 (nucleoside transporters), member 3 Solute carrier family 2 (facilitated glucose transporter), member 4 Solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 MAD homolog 6 MAD homolog 7 MAD homolog 9 (Drosophila) SNF related kinase Sorting nexin 33 T-box 5 Transcription factor 21 Transcription factor AP4 Thyroid hormone receptor alpha Toll-like receptor 4 Transcriptional regulation Hypothetical proteins/proteins with no known function Protein synthesis, modification, trafficking Signalling Signalling Signalling Signalling Channels, pumps, transporters Channels, pumps, transporters Channels, pumps, transporters 1382177_at 1373108_at 1378978_a_at, 1378979_x_at, 1392593_a_at 1390422_at 1382384_at 1372875_at 1390812_a_at 1376156_at 1385518_at 1373931_at 1390249_at 1382235_at 1376998_a_at 1389199_at 1372095_at 1373596_at 1393352_at 1380314_at 1380766_a_at 1391070_at 1398597_at 1376110_at 1389748_at, 1391447_at, 1395294_at 1392170_at 1394086_at 1386906_a_at 1389198_at 1383910_at 1367658_at 1393516_at 1374200_at 1388958_a_at Channels, pumps, transporters Transcriptional regulation Transcriptional regulation Transcriptional regulation Signalling Signalling Transcriptional regulation Transcriptional regulation Transcriptional regulation Agonists/Receptors Agonists/Receptors 1387976_at 1375121_at 1368897_at 1393262_at 1379662_a_at 1373239_at 1377139_at 1388782_at 1386435_at 1395928_at 1387982_at Slc9a3r2 Smad6 Smad7 Smad9 Snrk Snx33 Tbx5 Tcf21 Tcfap4 Thra Tlr4 15 Tmco6 Tmem119 Tmem204 Tmub1 Trib2 Trim62 Ttc8 Unknown Unknown Unknown Unknown Unknown Unknown Usf1 Usp2 Wipf1 Zbtb44 Zcchc14 Zcchc24 Zfp157 Zfp278 Zfp316 Zfp827 Zfp9 Zfyve21 Transmembrane and coiled-coil domains 6 Transmembrane protein 119 homolog Transmembrane protein 204 Transmembrane and ubiquitin-like domain containing 1 Tribbles homolog 2 Tripartite motif-containing 62 Tetratricopeptide repeat domain 8 Unknown Unknown Unknown Unknown Unknown Unknown Upstream transcription factor 1 Ubiquitin specific peptidase 2 WAS/WASL interacting protein family, member 1 Zinc finger and BTB domain containing 44 Zinc finger, CCHC domain containing 14 Zinc finger, CCHC domain containing 24 zinc finger protein 157 Zinc finger protein 278 Zinc finger protein 316 Zinc finger protein 827 Zinc finger protein 9 Zinc finger, FYVE domain containing 21 Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Cell-cell/cell-matrix adhesion/interaction, extracellular matrix Hypothetical proteins/proteins with no known function Signalling Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Sequences associated with no established gene Transcriptional regulation Protein synthesis, modification, trafficking Cyoskeleton and myofibrillar apparatus Transcriptional regulation Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Hypothetical proteins/proteins with no known function Transcriptional regulation Transcriptional regulation Transcriptional regulation Transcriptional regulation Hypothetical proteins/proteins with no known function Znf292 Zinc finger protein 292 Transcriptional regulation 16 1374637_at 1372935_at 1376623_at 1372961_at 1388821_at 1385232_at 1378416_at 1373776_at 1380900_at 1383659_a_at 1384135_at 1386002_at 1398467_at 1399006_at 1387703_a_at 1387227_at 1376376_at 1372414_at, 1382199_at 1386106_at, 1388672_at 1377154_at 1372205_at 1393438_at 1397496_at 1379097_at 1372030_at 1381902_at, 1390945_at, 1399119_at
