Supporting information Fig. S1. Atom types and schematic structure diagram Table S1 Lennard-Jones parameters, point charge and atomic masses Atom type* Element σ(nm) ε(kJ/mol) Si silicon 0 0 bO oxygen 0.2708 1.5381 OH oxygen 0.3 1.5797 nbO oxygen 0.3 0.71128 H hydrogen 0 0 OD oxygen 0.296 0.71128 S sulfur 0.355 1.046 OH_S oxygen 0.312 0.71128 H_S hydrogen 0 0 O_W oxygen 0.31506 0.6364 H_W hydrogen 0 0 * atom type assigned according to Fig. S1 ** calculate to equilibrate the total charge to zero q(e) 1.2805 -0.6405 -0.5261 -0.645 ** -0.3645 0.909 -0.546 0.473 -0.834 0.417 For bulk amorphous silica structure, we calculated the density and radial density functions of Si, O as shown in Fig. S2. Fig. S2. RDF of different atoms in bulk amorphous silica Fig. S3 shows the route to construct model structure. Blue surface in (c) is the accessible surface by nitrogen. Blue balls in (d) are the sulfonate sites. a b c d Fig. 13 model structure construction route. (a)supercell of high-crystoballite; (b) amorphous bulk silica; (c) mesoporous silica; (d) sulfonate modified mesoporous silica. (red balls: oxygen; yellow balls: silicon; white balls: hydrogen; blue balls: sulfur)