Diamantina Institute Research Projects http://www.di.uq.edu.au/research-projects Cancer Name Dr Marcel Dinger Project Details Characterisation of transcriptomic and epigenetic complexity in skin cancer-associated loci Identification of novel long noncoding RNAs in skin cancer by whole transcriptome sequencing Translation of next generation sequencing technology for clinical diagnostic and prognostic applications Application of personal and skin cancer genome sequencing for guiding treatment and modifying lifestyle Professor Ian Frazer Associate Professor Brian Gabrielli Dr Angus Harding Identifying the molecular basis for defective checkpoints in melanoma. Targeting defective cell cycle responses to ultraviolet radiation and TopoII inhibitors in melanoma. Defining the molecular changes in moles underpinning morphological changes detectable by non-invasive imaging techniques to improve their diagnostic and prognostic ability for early stage melanoma. Phone +61 7 3176 6728 Email m.dinger@uq.edu.au Phone +61 7 3346 1905 Email wendy.freeman@tri.edu.au Phone +61 7 3176 7129 Email briang@uq.edu.au Phone +61 7 3176 5285 Email a.harding1@uq.edu.au Combining computer models and clinical data to understand, treat and prevent brain cancer Cancer microvesicles as a source of biomarkers and novel target of anti-cancer therapy Systems biology approach to understand lipid raft and Phone caveolin function in health and disease +61 7 3176 7456 Discovery and validation of novel salivary and blood Email biomarkers for head and neck cancers using lectin m.hill2@uq.edu.au magnetic bead array-mass spectrometry, LeMBA-MS (with Dr Chamindie Punyadeera) NPM functions associated with acute myeloid Dr Michelle Hill Regulation of effector T cells by the innate immune response Immunotherapy for virus associated skin cancer Cervical cancer control in Vanuatu Contact 1 Name Dr Graham Leggatt Project Details leukemia (with Dr Kerry Inder) Dr Ali Naderi Associate Professor Nicholas Saunders Dr Fiona Simpson Dr James Wells Contact Trafficking of T cells to cancerous skin Immunotherapy of skin tumours after lymphodepletion T cell function in normal and cancerous skin tissue Phone +61 7 3176 5281 Email g.leggatt@uq.edu.au Functional studies of molecular mechanisms in breast Phone cancer +61 7 3176 5285 Biological and therapeutic studies of molecular Email apocrine breast cancer a.naderi@uq.edu.au Understanding the molecular basis for the control of squamous differentiation Understanding how these processes are dysregulated during the development of oral and skin cancers Exploiting this knowledge in the development of novel treatments for skin cancers and oral cancer Interrogating chemotherapeutic sensitivity Identifying novel strategies to treat metastatic osteosarcoma Epidermal growth factor trafficking in squamous cell carcinoma and its impact on patient treatment with anti-EGFR inhibitors Girdin, Daple and Gipie, the HkRP family in trafficking and Oncogenesis Immunotherapy for the treatment of established skin cancer Requirements for the initiation and treatment of NonMelanoma skin cancer Immunophenotyping squamous skin cancer Immunological identifiers of skin pathology Phone +61 7 3176 5984 Email nsaunders@uq.edu.au Phone +61 7 3176 7456 Email f.simpson@uq.edu.au Phone +61 7 3176 5315 Email j.wells3@uq.edu.au Autoimmunity Name Dr Antje Blumenthal Project Details Innate immune recognition of Mycobacterium tuberculosis and other pathogens Molecular mechanisms of macrophage functions Regulators of immune responses during infection and inflammation Discovery of novel anti-microbials against Contact Phone +61 3176 2926 Email a.blumenthal@uq.edu.au 2 Name Project Details tuberculosis Professor Matt Brown Dr Emma HamiltonWilliams Dr Tony Kenna Dr Stephen Mattarollo Dr Ray Steptoe Genetics of common bone and joint diseases Osteoporosis Interethnic mapping of common human diseases; ankylosing spondylitis, rheumatoid arthritis, schizophrenia ENU mutagenesis and models of musculoskeletal diseases Gene deserts involved in ankylosing spondylitis Genetics of multiple sclerosis Novel gene-mapping approaches using nextgeneration sequencing A novel role for the interleukin-2 pathway in humans and mouse models of type 1 diabetes Genetic control of intestinal microflora in type 1 diabetes susceptibility Impaired Regulatory T cell function in type 1 diabetes Contact Phone +61 7 3176 5954 Email di.director@uq.edu.au Phone +61 7 3176 5392 Email e.hamiltonwilliams@uq.edu.au Functional characterisation of genetic variants Phone in the IL23R pathway associated with +61 7 3176 5832 ankylosing spondylitis Email t.kenna@uq.edu.au NKT cell immune adjuvant-based therapeutic vaccination in a mouse model of B cell lymphoma. Combination immunotherapies against haematological malignancies. Mechanisms of tumor resistance against Phone: immune-based therapies. +61 7 3176 6943 Susceptibility of autoimmune-prone mice to Email tumor development. s.mattarollo@uq.edu.au Impact of endocytosis inhibitors on monoclonal antibody-based immunotherapeutics against cancer. Localized immune suppressive mechanisms in HPV-associated pre-cancers. Cellular and molecular pathways of T-cell tolerance Prevention and reversal of autoimmune diabetes Novel methods of gene delivery for tolerance Immunotherapy of allergies and anaphylaxis Phone +61 7 3176 5393 Email r.steptoe@uq.edu.au 3 Name Dr Gethin Thomas Project Details Gene expression profiling in ankylosing spondylitis Identification of novel genes in skeletal disease through large-scale ENU mouse mutagenesis Novel treatment approaches to prevent joint fusion in ankylosing spondylitis Elucidation of basis for “gene desert” associations with ankylosing spondylitis Professor Ranjeny Thomas Professor Peter Visscher Understanding the molecular control of dendritic cell function in tolerance Initiation of inflammatory arthritis Rheumatoid arthritis antigen-specific therapy Type 1 (Juvenile) Diabetes Innate Immunity: mouse models and human longitudinal study Use of statins to reduce atherosclerosis in early rheumatoid arthritis Heritability of gene expression Statistical methods and applications using SNP data to test whether risk factors for disease are causative Understanding the genetic architecture of complex traits through analysis of DNA sequence data Development and application of risk prediction models for common diseases Contact Phone +61 7 3176 2755 Email gethin.thomas@uq.edu.au Phone +61 7 3176 5365 Email ranjeny.thomas@uq.edu.au Phone +61 7 3346 1814 Email peter.visscher@uq.edu.au 4