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Stochastic and deterministic mechanisms of assembly
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Proceedings of the National Academy of Sciences of the United States of America
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Chase, J. M., and J. A. Myers. 2011. Disentangling the importance of ecological niches from
stochastic processes across scales. Philosophical Transactions of the Royal Society B:
Biological Sciences 366:2351 –2363.
Chase, J. M., E. G. Biro, W. A. Ryberg, and K. G. Smith. 2009. Predators temper the relative
importance of stochastic processes in the assembly of prey metacommunities. Ecology
Letters 12:1210–1218.
Gravel, D., C. D. Canham, M. Beaudet, and C. Messier. 2006. Reconciling niche and neutrality:
the continuum hypothesis. Ecology Letters 9:399–409.
HilleRisLambers, J., P. B. Adler, W. S. Harpole, J. M. Levine, and M. M. Mayfield. 2012.
Rethinking Community Assembly through the Lens of Coexistence Theory. Annual
Review of Ecology, Evolution, and Systematics 43:227–248.
Karst, J., B. Gilbert, and M. J. Lechowicz. 2005. Fern community assembly: The roles of chance
and the environment at local and intermediate scales. Ecology 86:2473–2486.
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the distributions of common tree and shrub species in a tropical forest landscape,
Panama. Journal of Tropical Ecology 22:575–586.
Tilman, D. 2004. Niche tradeoffs, neutrality, and community structure: A stochastic theory of
resource competition, invasion, and community assembly. Proceedings of the National
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Biology 85:183–206.
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challenges and a developing synthesis of ecological community assembly theory.
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Functional-trait based assembly
Kraft, N. J. B., R. Valencia, and D. D. Ackerly. 2008. Functional Traits and Niche-Based Tree
Community Assembly in an Amazonian Forest. Science 322:580 –582.
Fukami, T., T. Martijn Bezemer, S. R. Mortimer, and W. H. van der Putten. 2005. Species
divergence and trait convergence in experimental plant community assembly. Ecology
Letters 8:1283–1290.
Green, J. L., B. J. M. Bohannan, and R. J. Whitaker. 2008. Microbial Biogeography: From
Taxonomy to Traits. Science 320:1039–1043. doi: 10.1126/science.1153475.
McGill, B. J., B. J. Enquist, E. Weiher, and M. Westoby. 2006. Rebuilding community ecology
from functional traits. Trends in Ecology & Evolution 21:178–185.
Phylogenetic constraints on assembly
Emerson, B. C., and R. G. Gillespie. 2008. Phylogenetic analysis of community assembly
and structure over space and time. Trends in Ecology & Evolution 23:619–630.
Wiens, J. J., and M. J. Donoghue. 2004. Historical biogeography, ecology and species richness.
Trends in Ecology & Evolution 19:639–644.
Helmus, M. R., and A. R. Ives. 2012. Phylogenetic diversity–area curves. Ecology 93:S31–S43.
Helmus, M. R., K. Savage, M. W. Diebel, J. T. Maxted, and A. R. Ives. 2007. Separating the
determinants of phylogenetic community structure. Ecology Letters 10:917–925.
Kraft, N. J. B., W. K. Cornwell, C. O. Webb, and D. D. Ackerly. 2007. Trait Evolution,
Community Assembly, and the Phylogenetic Structure of Ecological Communities. The
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Role of dispersal limitation
Svenning, J. C., and S. J. Wright. 2005. Seed limitation in a Panamanian forest. Journal of
Ecology 93:853–862.
Seidler, T. G., and J. B. Plotkin. 2006. Seed dispersal and spatial pattern in tropical trees. PLoS
Biology 4:2132–2137.
Global change and environmental filtering
Thuiller, W., S. Lavergne, C. Roquet, I. Boulangeat, B. Lafourcade, and M. B. Araujo. 2011.
Consequences of climate change on the tree of life in Europe. Nature 470:531–534.
Reu, B., S. Zaehle, R. Proulx, K. Bohn, A. Kleidon, R. Pavlick, and S. Schmidtlein. 2011. The
role of plant functional trade-offs for biodiversity changes and biome shifts under
scenarios of global climatic change. Biogeosciences 8:1255–1266.
Tipping points and multiple steady states
Fukami, T., and M. Nakajima. 2011. Community assembly: alternative stable states or alternative
transient states? Ecology Letters 14:973–984.
DiMichele, W. A., A. K. Behrensmeyer, T. D. Olszewski, C. C. Labandeira, J. M. Pandolfi, S. L.
Wing, and R. Bobe. 2004. Long-term stasis in ecological assemblages: evidence from the
fossil record. Annual Review of Ecology Evolution and Systematics 35:285–322.
Importance of spatial and temporal scale
Cavender-Bares, J., A. Keen, and B. Miles. 2006. Phylogenetic structure of Floridian plant
communities depends on taxonomic and spatial scale. Ecology 87:S109–S122.
Ricklefs, R. E. 2004. A comprehensive framework for global patterns in biodiversity. Ecology
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Experimental community assembly
Fargione, J., C. S. Brown, and D. Tilman. 2003. Community assembly and invasion: An
experimental test of neutral versus niche processes. Proceedings of the National Academy
of Sciences 100:8916–8920.
Fukami, T., T. Martijn Bezemer, S. R. Mortimer, and W. H. van der Putten. 2005. Species
divergence and trait convergence in experimental plant community assembly. Ecology
Letters 8:1283–1290.
Weiher, E., and P. A. Keddy. 1995. The Assembly of Experimental Wetland Plant Communities.
Oikos 73:323–335.
Big data approaches to understanding assembly
White, E. P., K. M. Thibault, and X. Xiao. 2012. Characterizing species abundance distributions
across taxa and ecosystems using a simple maximum entropy model. Ecology 93:1772–
1778.
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