Supporting Information for Liquid crystal sensor for the detection of acetylcholine using acetylcholinesterase immobilized on a nanostructured polymeric surface Gyeo-Re Han, and Chang-Hyun Jang* Department of Chemistry, Gachon University, Seongnam-Si, Gyeonggi-Do 461-701, Korea * Corresponding author. Tel. +82-31-750-8555 E-mail address: chjang4u@gachon.ac.kr 1 Experimental details 1. Cleaning of the substrates Glass microscope slides and silicon wafers were cleaned using a piranha solution (70% H2SO4/30% H2O2; Caution: piranha solution reacts violently with organic materials and should be handled with extreme caution; do not store the solution in closed containers.) for 1 h at 80°C. After removal from the cleaning solution, the substrates were rinsed with copious amounts of DI water, ethanol, and methanol and dried under a stream of gaseous N2. The cleaned substrates were then stored overnight in an oven at 120°C. 2. Preparation of the octyltrichlorosilane (OTS)-functionalized silica substrate The piranha-cleaned glass slides and silicon wafers were immersed into an OTS/n-heptane solution for 30 min. The substrates were then rinsed with methylene chloride and dried under a stream of N2. Next, the OTS-treated glass slides were tested for homeotropic alignment by observing the orientation of 5CB sandwiched between the two OTS slides. Any slide that did not display homeotropic alignment was discarded. 3. Deposition of the gold films For use in combination with the liquid crystals, semi-transparent films of gold with a thicknesses of 200 Å were deposited onto the patterned PUA substrates mounted on a rotating planetary using an electron beam evaporator. The rotation of the substrates on the planetary mount ensured that the gold was deposited without a preferred direction of incidence. A layer of titanium (thickness = 80 Å) was used to promote adhesion between the PUA substrate and the gold film. The rate of deposition of gold and titanium was 0.2 Å/s, and the pressure in the evaporator was < 5 Torr during deposition. 2 4. Atomic force microscopy (AFM) The surface topology of the PUA substrates was characterized by AFM (NanoScope IIIa, Veeco Metrology; Santa Barbara, CA) after fabricating the polymeric surface. The wavelength and amplitude of the buckling patterns were determined by taking the average of the peak-topeak and peak-to-through distance, respectively, of 10 parallel waves. Images of the 11 MUAtreated surfaces after enzyme immobilization were also obtained by AFM. The samples were imaged under ambient conditions using silicon tips with an average radius of ~ 10 nm. Images were acquired at a scan rate of 1.0 Hz with 256 sample points per line. 5. Ellipsometry The ellipsometric thicknesses were measured using an Elli-SE(UV)-FM8 (Ellipsotechnology) at a wavelength of 380–1100 nm and an angle of incidence of 70°. All measurements were performed using silicon wafers that were treated with the same procedure used to prepare the enzyme immobilizations on the glass microscope slides, except for the surface functionalization with 11-mercaptoundecanoic acid on the silicon wafers. Solutions of 3-aminopropyltriethoxysilane (APTES) and succinic anhydride (SA) were used to form carboxylic acid-terminated SAMs on the silicon wafers. The increase in optical thickness of the organic layer after the binding of proteins was calculated using a simple two-layer model (organic layer/effective substrate of SiO2/Si) by assuming that the refractive index of the organic layers was 0. 3 Figure S1.Tapping mode AFM images and cross-sectional profiles of the gold deposited polymer substrate. 4 Figure S2. Polarized light microscope images of 5CB on the AChE-immobilized surface incubated with 1000 nM ACh solution for 2 h at 37°C: (a) before and (b) after rinsing with 15 mM NaBr. The orientational angle of the sample indicated on the left side (0° and 45°) was defined as the angle between the direction of the anisotropic pattern and either polarizer. The horizontal dimension of each image was 1.25 mm. 5