Name: ________________________________ Date:____________ Group:_____ Period:______ Human Karyotyping Lab Background: Occasionally chromosomal material is lost or rearranged during the formation of gametes or during cell division of the early embryo. Such changes, primarily the result of nondisjunction or translocation, are so severe that the pregnancy ends in miscarriage – or fertilization does not occur at all. It is estimated that one in 156 live births have some kind of chromosomal abnormality. Some of the abnormalities associated with chromosome structure and number can be detected by a test called a karyotype. A karyotype can show prospective parents whether they have certain abnormalities that could be passed on to their offspring, or it may be used to learn the cause of a child’s disability. Karyotypes can also reveal the gender of a fetus or test for certain defects through examination of cells from uterine fluid – a procedure called amniocentesis – or through sampling of placental membranes. Over 400,000 karyotype analyses are performed each year in the U.S. and Canada. To create a karyotype, chromosomes from a cell are stained and photographed. The photograph is enlarged and cut up into individual chromosomes. The homologous pairs are identified and arranged in order by size (with the exception of the sex chromosomes; these appear last). These tests are typically done on a sample of blood, although any body cell could be used. The cell must be undergoing mitosis – preferably in metaphase – so that the chromosomes are replicated, condensed, and visible under a microscope. A normal human karyotype will have 46 total chromosomes, 23 pairs. The last pair, the sex chromosomes determine the sex of the individual. A female develops when the sex chromosomes match--XX . A male develops if the two sex chromosomes are unmatched—XY. An abnormal karyotype may have only 45 or 47+ chromosomes, depending on the disorder. Numerical chromosomal abnormalities result from an incorrect distribution of chromosomes into the gametes during meiosis. This can happen when homologous chromosomes (maternal and paternal chromosome copies) fail to separate during meiosis I, or when sister chromatids (duplicate chromosome copies joind at the centromere) fail to separate during meiosis II. This lack of chromosome separation is called nondisjunction. It results in some gametes have two copies of a particular chromosome and some gametes without any copies (see Figure below). Purpose: The purpose of this laboratory experience is: -understand what a karyotype is and how it is performed. -understand reason for performing a karyotype. -to determine what genetic defect is present in a chromosome sample. -to investigate a variety of genetic disorders that commonly occur and are studied in biology classes. Materials: The following materials are needed to perform this laboratory experience: -2 sets of chromosomes -2 magnetic boards -Chromosome Key -Chromosomal Abnormalities Key Procedure: 1. Using the materials, you will complete TWO different karyotypes provided ONE AT A TIME. One will be normal & one will be abnormal. 2. On the data sheet mark which set of chromosomes you will be using. 3. Record the total number of chromosomes in the set. 4. Compare the chromosomes in the bag to the Chromosome Key and find its’ EXACT match. Place the chromosome under the matching number on the magnetic board. 5. Continue this procedure until you have matched all chromosomes and placed each of them in the corresponding magnetic board. 6. In the event that you have an extra chromosome, DO NOT THROW IT OUT OR DISCARD IT! It is the chromosome that causes your mutation/disorder and you must match it correctly. 7. Repeat steps 1-6 for your second set of chromosomes. KEEP THE 2 SETS SEPARATED!!! 8. Once your chromosomes are all placed correctly on the magnetic boardS answer the questions and complete the lab. Data: Karyotype 1: Set _________ Karyotype 2: Set _________ Total # of chromosomes:____________ Total # of chromosomes:____________ Normal or Abnormal (circle one) Normal or Abnormal (circle one) How do you know? How do you know? Name of Chromosomal Disorder: (if any, see key) Name of Chromosomal Disorder: (if any, see key) Sex chromosomes: ______ & ______ Sex chromosomes: ______ & ______ Male or Female (circle one) Male or Female (circle one) Conclusion Questions: 1. How many human babies are born with chromosomal abnormalities? 2. How can these abnormalities be detected? 3. What are 3 things that karyotype can reveal? ONE: TWO: THREE: 4. What is an amniocentesis? 5. Where are two sources of fluid that can be used for an amniocentesis? ONE: TWO: 6. What two things have to be done to chromosomes BEFORE a karyotype can be created? ONE: TWO: 7. How are chromosomes arranged in a karyotype? 8. How many chromosomes does a person with a normal karyotype have? 9. A karyotype reveals that a baby has the sex chromosomes XX. What gender is the child? 10. A karyotype reveals that a baby has the sex chromosomes XY. What gender is the child? 11. An abnormal karyotype may have only 45 or 47+ chromosomes, how does this occur? 12. What is it called when chromosomes or chromatids fail to separate? Refer to the completed abnormal karyotype that you assembled for questions #13-15. 13. What chromosomal abnormality will/does this child have? (i.e. Trisomy 8: 1 extra chromosome #8, Mosaic Syndrome) 14. How common is this disorder for babies born? 15. What are some of the symptoms of the disorder? 16. If a human gamete with one extra chromosome participates in fertilization with a normal human gamete, how many chromosomes will the zygote (fertilized egg) have? 17. If a human gamete with one missing chromosome participates in fertilization with a normal human gamete, how many chromosomes will the zygote (fertilized egg) have? 18. If non-disjunction occurs in humans for one pair of homologous chromosomes during Meiosis I, will any normal gametes result? What chromosome number would each of the four gametes have? Gamete 1: Gamete 2: Gamete 3: Gamete 4: 19. If non-disjunction occurs in humans for sister chromatids of one chromosome during Meiosis II, will any normal gametes result? What chromosome number would each of the four gametes have? Gamete 1: Gamete 2: Gamete 3: Gamete 4: 20. Many genetic disorders are caused by errors (mutations) in the genes on our chromosomes. Usually, in disorders caused by chromosomal abnormalities, the genes themselves are not mutated; rather, there are too many or too few of them. Why do you think that having too many or too few normal genes created disorders? Chromosomal Abnormalities Key Extra chromosome 21 Down Syndrome Occurs in 1 in 700 births in U.S. Children with Down syndrome have a distinct facial appearance. Though not all children with Down syndrome have the same features, some of the more common features are: Flattened facial features Small head Short neck Protruding tongue Upward slanting eyes, unusual for the child's ethnic group Unusually shaped ears Children with Down syndrome may also have: Poor muscle tone Broad, short hands with a single crease in the palm Relatively short fingers Excessive flexibility Infants with Down syndrome may be of average size, but typically they grow slowly and remain shorter than other children of similar age. In general, developmental milestones, such as sitting and crawling, occur at about twice the age of children without impairment. Children with Down syndrome also have some degree of mental retardation, most often in the mild to moderate range Extra chromosome 13 Edwards Syndrome Occurs in about 1 out of every 5000 live births Edwards' syndrome is usually fatal, with most babies dying before birth. Of those who do make it to birth, 20–30 percent die within one month. However, a small number of babies (less than 10 percent) live at least one year. Most children born with Edwards' syndrome appear weak and fragile, and they are often underweight. The head is unusually small and the back of the head is prominent. The ears are malformed and low-set, and the mouth and jaw are small (micrognathia). The baby may also have a cleft lip or cleft palate . Frequently, the hands are clenched into fists, and the index finger overlaps the other fingers. The child may have clubfeet, and toes may be webbed or fused. Numerous problems involving the internal organs may be present. Abnormalities often occur in the lungs and diaphragm (the muscle that controls breathing), and blood vessel malformations are common. Various types of congenital heart disease , including ventricular septal defect (VSD), atrial septic defect (ASD), or PDA (patent ductus arteriosus ), may be present. The child may have an umbilical or inguinal hernia , malformed kidneys, and abnormalities of the urogenital system, including undescended testicles in a male child (cryptochordism). Extra chromosome 18 Patau Syndrome Occurs in about 1 out of every 10,000 newborns Patau syndrome is the least common and most severe of the viable autosomal trisomies (chromosomal abnormality with 3 copies of a chromosome). Median survival is fewer than 3 days. Newborns with Patau syndrome that survive to gestation and birth share common abnormalities, such as extra fingers or toes, deformed feet – also known as rocker-bottom feet, various neurological problems including small head – microcephaly, failure of the forebrain to properly split during gestation, chronic deficiency, different facial defects including small eyes, malformed nose, cleft lip or cleft palate, heart and kidney defects or abnormal genitalia. XXY Klinefelter Syndrome Occurs in 1 in 2000 births Klinefelter syndrome is one of the most common genetic conditions affecting males. Klinefelter syndrome adversely affects testicular growth, and this can result in smaller than normal testicles. This can lead to lower production of the sex hormone testosterone. Klinefelter syndrome may also cause reduced muscle mass, reduced body and facial hair, and enlarged breast tissue. The effects of Klinefelter syndrome vary, and not everyone with it develops signs and symptoms. Klinefelter syndrome often isn't diagnosed until adulthood. Most men with Klinefelter syndrome produce little or no sperm. But assisted reproductive procedures may make it possible for some men with Klinefelter syndrome to father children. XYY Double Y Syndrome Occurs in 1 in 1000 births Although males with this condition may be taller than average, this chromosomal change typically causes no unusual physical features. Most males with 47,XYY syndrome have normal sexual development and are able to father children. 47,XYY syndrome is associated with an increased risk of learning disabilities and delayed development of speech and language skills. Delayed development of motor skills (such as sitting and walking), weak muscle tone (hypotonia), hand tremors or other involuntary movements (motor tics), and behavioral and emotional difficulties are also possible. These characteristics vary widely among affected boys and men. XO - missing sex chromosome Turner Syndrome Occurs in 1 in 5,000 births Turner syndrome, a condition that affects only girls and women, results from a missing or incomplete sex chromosome. Signs and symptoms of Turner syndrome may vary significantly. In some girls, a number of physical features and poor growth are apparent early. Signs and symptoms that may be apparent at birth or during infancy include: Wide or web-like neck Receding or small lower jaw High, narrow roof of the mouth (palate) Low-set ears Drooping eyelids Short fingers and toes Slightly smaller than average height at birth Delayed growth For some girls, the presence of Turner syndrome may not be readily apparent. Signs and symptoms in older girls, adolescents and young women that may indicate Turner syndrome include: No growth spurts at expected times in childhood Short stature, with an adult height of about 8 inches (20 centimeters) less than might be expected for a female member of her family Learning disabilities, particularly with learning that involves spatial concepts or math, though intelligence is usually normal Difficulty in social situations, such as problems understanding other people's emotions or reactions Failure to begin sexual changes expected during puberty — due to ovarian failure that may have occurred by birth or gradually during childhood, adolescence or young adulthood Early end to menstrual cycles not due to pregnancy For most women with Turner syndrome, inability to conceive a child without fertility treatment Teacher Key for Team Sets Team Set 1 B = Normal, Female M = Downs, Male Team Set 2 G = Normal, Male K = Turners, Female Team Set 3 C = Normal, Female O = Kleinfelters, Male Team Set 4 H = Normal, Male L = Patau, Female Team Set 5 D = Normal, Female F = Downs, Male Team Set 6 I = Normal, Male N = Edwards , Female Team Set 7 E = Normal, Female A = Double Y, Male Teacher Demo J = Normal Female