1 Think about… 4.1 Metabolism 4.2 Properties and actions of enzymes 4.3 Factors affecting the rate of enzymatic reactions 4.4 Applications of enzymes Recall ‘Think about…’ Summary concept map 2 I can help you! 3 Wash jeans with stones. Stones break some cellulose fibres & remove the blue dye. 4 enzyme Now we can use enzymes to break down the fibres more quickly! 5 1 What are enzymes enzyme 6 2 What are the importance of enzymes to organisms enzyme 7 3 enzyme What are the advantages of using enzymes in the making of stonewashed jeans 8 4.1 Metabolism • different chemical reactions take place in living cells respiration protein synthesis lipid synthesis 9 4.1 Metabolism • different chemical reactions take place in living cells sum of the chemical reactions that take place in an organism = metabolism (新陳代謝) 10 4.1 Metabolism Metabolism Catabolism (分解代謝) Anabolism (合成代謝) 11 4.1 Metabolism 1 Catabolism complex molecule energy simple molecules • breaking-down reactions • release of energy 12 4.1 Metabolism 1 Catabolism • example: respiration carbon water + dioxide glucose energy 13 4.1 Metabolism Metabolism Catabolism (分解代謝) Anabolism (合成代謝) 14 4.1 Metabolism 2 Anabolism simple molecules energy • building-up reactions • requires energy complex molecule 15 4.1 Metabolism 2 Anabolism • example: condensation of glucose starch glucose energy 16 4.1 Metabolism What are catabolism, anabolism and metabolism? Catabolism all breaking-down reactions in an organism Anabolism all building-up reactions in an organism Metabolism all chemical reactions in an organism 17 4.2 Properties and actions of enzymes What is the role of enzymes in metabolism? 18 4.2 Properties and actions of enzymes reacting molecules product (生成物) energy barrier (能障) 19 4.2 Properties and actions of enzymes energy reacting molecules product (生成物) Energy supplied energy to barrier overcome the energy barrier(能障) 20 4.2 Properties and actions of enzymes • analogy: pushing a rock up a hill reacting molecule product 21 4.2 Properties and actions of enzymes • analogy: pushing a rock up a hill reacting molecule energy barrier product - the reaction does not start due to the presence of energy barrier 22 4.2 Properties and actions of enzymes • analogy: pushing a rock up a hill maximum energy energy - when energy is supplied … reaction starts 23 4.2 Properties and actions of enzymes How can the energy barrier be overcome in our body? 24 4.2 Properties and actions of enzymes By increasing the temperature? smaller energy barrier • energy level raised energy barrier is easier to overcome 25 4.2 Properties and actions of enzymes By increasing the temperature? Not possible smaller energy because highbarrier temperature kill the body cells! • energy level raised energy barrier is easier to overcome 26 4.2 Properties and actions of enzymes lower energy barrier • rate of chemical reactions is speeded up by enzymes (酶) 27 4.2 Properties and actions of enzymes energy • rate of chemical reactions is speeded up by enzymes (酶) 28 4.2 Properties and actions of enzymes 4.1 Demonstration of the breaking-down action of enzymes 1 Prepare liver extract. a Grind fresh liver with cold distilled water. cold distilled water fresh pig liver 29 4.2 Properties and actions of enzymes 4.1 b Filter the ground tissue with filter paper. filter paper liver extract 30 4.2 Properties and actions of enzymes 4.1 c Dilute the liver extract by 50% with cold distilled water. distilled water liver extract 31 4.2 Properties and actions of enzymes 4.1 2 Set up 3 test tubes A to C. Observe for the release of gas and the gas given off with a glowing splint. A hydrogen peroxide + liver extract B distilled water + liver extract C hydrogen peroxide + distilled water 32 4.2 Properties and actions of enzymes 4.1 Results and discussion • A gas is released from tube A. The gas is oxygen because it re-lights a glowing splint. • No oxygen is released from the control set-ups (tubes B and C). 33 4.2 Properties and actions of enzymes 4.1 Results and discussion • Fresh liver tissues can break down hydrogen peroxide possibly due to the presence of catalase in the liver tissue. • Catalase speeds up the breakdown of hydrogen peroxide. 34 4.2 Properties and actions of enzymes How do enzymes work? • each enzyme has an active site of a specific (專一的) shape active site (活性部位) enzyme 35 4.2 Properties and actions of enzymes How do enzymes work? • active site can combine with substrate (受質) molecule(s) substrate enzyme shapes fit together! 36 4.2 Properties and actions of enzymes How do enzymes work? • active site can combine with substrate (受質) molecule(s) substrate enzyme enzymesubstrate complex (酶受質複合物) • complex breaks down to give product(s) 37 4.2 Properties and actions of enzymes How do enzymes work? • in catabolic reactions: substrate enzymesubstrate complex enzyme 38 4.2 Properties and actions of enzymes How do enzymes work? • in catabolic reactions: products enzymesubstrate complex enzyme unchanged and can be reused 39 4.2 Properties and actions of enzymes How do enzymes work? • in anabolic reactions: substrates enzymesubstrate complex enzyme 40 4.2 Properties and actions of enzymes How do enzymes work? • in anabolic reactions: product enzymesubstrate complex enzyme unchanged and can be reused 41 4.2 Properties and actions of enzymes Properties of enzymes 1) Biological catalysts • act as catalysts (催化劑) in organisms speed up metabolic reactions 42 4.2 Properties and actions of enzymes Properties of enzymes 2) Reusable • enzyme returns to its original form after reaction before reaction same! after reaction 43 4.2 Properties and actions of enzymes Properties of enzymes 3) Required in small amount large amount of products produced reusable reusable reusable 44 4.2 Properties and actions of enzymes Properties of enzymes 4) Proteins • enzymes are denatured (變性) at high temperatures and extreme pH 45 4.2 Properties and actions of enzymes Properties of enzymes 5) Specific action different shape! 46 4.2 Properties and actions of enzymes Properties of enzymes 5) Specific action • each enzyme combines with a specific substrate each enzyme catalyses only one type of reaction 47 4.2 Properties and actions of enzymes Properties of enzymes 5) Specific action • can be explained by lock-and-key hypothesis (鎖鑰假說) 48 4.2 Properties and actions of enzymes Lock-and-key hypothesis specific shape • fit only a particular lock 49 4.2 Properties and actions of enzymes Lock-and-key hypothesis active sites of specific shape • fit only a particular substrate 50 4.2 Properties and actions of enzymes 1 Enzymes are biological catalysts that speed up chemical reactions in organisms by lowering the energy barrier of reactions. They are important in regulating metabolism. 51 4.2 Properties and actions of enzymes 2 An enzyme works when its active site combines with substrate(s) to form an enzyme-substrate complex . The complex then breaks down to give the product(s). The enzyme is released in its original form . 52 4.2 Properties and actions of enzymes 3 Enzyme actions are specific because their active sites have specific shapes . Enzyme combines only with substrate(s) that fits into its active site. The specificity of enzyme actions can be explained by the lock-and-key hypothesis . 53 4.2 Properties and actions of enzymes 4 Five properties of enzymes: i) They are biological catalysts . ii) They can be reused . iii) They are required in small amount. iv) They are proteins . v) Their actions are specific . 54 4.3 Factors affecting the rate of enzymatic reactions Enzyme activity • reaction rate of an enzymatic reaction = the rate at which substrates are used up or broken down = the rate of product formation 55 4.3 Factors affecting the rate of enzymatic reactions Enzyme activity enzyme • reaction rate of an enzymatic reaction = the rate at which substrates are used up or broken down = the rate of product formation 56 4.3 Factors affecting the rate of enzymatic reactions enzyme temperature pH inhibitor 57 4.3 Factors affecting the rate of enzymatic reactions Temperature reaction rate 0˚C low kinetic energy enzyme inactive temperature(℃) 0 10 20 30 40 50 60 58 4.3 Factors affecting the rate of enzymatic reactions Temperature reaction rate temperature rises more kinetic energy temperature(℃) 0 10 20 30 40 50 60 59 4.3 Factors affecting the rate of enzymatic reactions Temperature more kinetic energy molecules vibrate more rapidly collide more frequently have higher chance to form an enzymesubstrate complex 60 4.3 Factors affecting the rate of enzymatic reactions Temperature reaction rate temperature rises 0 10 20 more kinetic energy reaction rate increases temperature(℃) 30 40 50 60 61 4.3 Factors affecting the rate of enzymatic reactions Temperature reaction rate maximum rate optimum temperature rate of enzymatic reaction reaches maximum temperature(℃) 0 10 20 30 40 50 60 62 4.3 Factors affecting the rate of enzymatic reactions Temperature reaction rate temperature higher than optimum temperature enzyme denatured reaction rate decreases temperature(℃) 0 10 20 30 40 50 60 63 4.3 Factors affecting the rate of enzymatic reactions Enzymes are killed by heating so the rate of enzymatic reaction decreases. 64 4.3 Factors affecting the rate of enzymatic reactions Enzymes are NOT living things. They cannot be killed. They are denatured (their shapes are changed) at very high temperatures. 65 4.3 Factors affecting the rate of enzymatic reactions 4.2 Simulation Investigation of the effect of temperature on enzyme activity 1 Add amylase solution to test tubes A to F. Add starch solution to test tubes 1 to 6. 2 Leave the different pairs of test tubes in water baths at different temperatures for 10 minutes. 66 4.3 Factors affecting the rate of enzymatic reactions 4.2 ice starch solution 0˚C 20˚C 40˚C 60˚C 80˚C 100˚C amylase solution 67 4.3 Factors affecting the rate of enzymatic reactions 4.2 3 Pour the amylase solution into starch solution. Put the tube of mixture back to its beaker. Record the time as zero. amylase solution starch solution 68 4.3 Factors affecting the rate of enzymatic reactions 4.2 4 At 2-minute intervals, transfer a drop of each mixture to an iodine drop. Record the time it takes for the blue-black colour to disappear. amylase and starch mixture iodine drops spot plate 69 4.3 Factors affecting the rate of enzymatic reactions 4.2 Results and discussion • The time it takes for the blue-black colour to disappear is the shortest at 60˚C. • The starch does not disappear at 0˚C, 80˚C and 100˚C. 70 4.3 Factors affecting the rate of enzymatic reactions 4.2 Results and discussion • At low temperature, the enzymatic reaction rate is low because amylase is inactive. • Its activity increases with temperature until it reaches a maximum (around 60˚C). 71 4.3 Factors affecting the rate of enzymatic reactions 4.2 Results and discussion • The enzyme activity is the highest at 60˚C. • Above the optimum temperature, the enzyme activity decreases and the reaction rate decreases until the enzyme becomes denatured and can no longer work. 72 4.3 Factors affecting the rate of enzymatic reactions enzyme temperature pH inhibitor 73 4.3 Factors affecting the rate of enzymatic reactions pH reaction rate pepsin many enzymes in mammals (e.g. salivary amylase) pancreatic lipase 74 2 4 6 8 10 12 14 pH 4.3 Factors affecting the rate of enzymatic reactions pH reaction rate each enzyme works in a narrow range of pH 75 2 4 6 8 10 12 14 pH 4.3 Factors affecting the rate of enzymatic reactions pH optimum pH for most enzymes: pH 5 – pH 9 each enzyme have their own optimum pH unsuitable pH causes denaturation reaction rate 76 2 4 6 8 10 12 14 pH 4.3 Factors affecting the rate of enzymatic reactions 4.3 Simulation Investigation of the effect of pH on enzyme activity 1 Add Benedict’s solution to test tubes 1 to 6. Benedict’s solution 77 4.3 Factors affecting the rate of enzymatic reactions 4.3 2 Add sucrose solution to another 6 test tubes A to F. Then add citrate-phosphate buffer solution at different pH values to the tubes as shown. Tube pH of buffer solution A B C D E F 3.2 4.0 5.2 6.0 7.0 8.0 78 4.3 Factors affecting the rate of enzymatic reactions 4.3 3 Add invertase solution to test tubes A to F. Leave at room temperature for 5 minutes. sucrose solution + citratephosphate buffer + invertase 79 4.3 Factors affecting the rate of enzymatic reactions 4.3 4 Pour the Benedict’s solution in test tubes 1 to 6 into test tubes A to F respectively. Shake the tubes gently. Put the test tubes into a boiling water bath for 10 minutes. boiling water 80 4.3 Factors affecting the rate of enzymatic reactions 4.3 5 Allow the tubes to stand for 15 minutes. Measure the depth of any brick-red precipitate settled in the test tubes. 81 4.3 Factors affecting the rate of enzymatic reactions 4.3 Results and discussion • Precipitate is formed in tubes A, B, C and D. The largest amount of precipitate is settled in tube C. No precipitate is formed in tubes E and F. • The results show that invertase works in an acidic medium. It has an optimum pH value around pH 5.2. 82 4.3 Factors affecting the rate of enzymatic reactions enzyme temperature pH inhibitor 83 4.3 Factors affecting the rate of enzymatic reactions Inhibitors • inhibitors (抑制劑) are chemicals that slow down or stop the activities of enzymes 84 4.3 Factors affecting the rate of enzymatic reactions Inhibitors Competitive inhibitors (競爭性抑制劑) Non-competitive inhibitors (非競爭性抑制劑) 85 4.3 Factors affecting the rate of enzymatic reactions 1 Competitive inhibitors Animation competitive inhibitor substrate similar shape! 86 4.3 Factors affecting the rate of enzymatic reactions 1 Competitive inhibitors • compete with substrates for active sites substrate inhibitor active site enzyme 87 4.3 Factors affecting the rate of enzymatic reactions 1 Competitive inhibitors reaction rate decreases enzyme inhibitor prevents binding of substrate chance to form enzyme-substrate complex lowered 88 4.3 Factors affecting the rate of enzymatic reactions 1 Competitive inhibitors enzyme reversible binding substrate can bind when inhibitor leaves 89 4.3 Factors affecting the rate of enzymatic reactions 1 Competitive inhibitors more substrates, greater chance of binding reaction rate increases 90 4.3 Factors affecting the rate of enzymatic reactions Inhibitors Competitive inhibitors (競爭性抑制劑) Non-competitive inhibitors (非競爭性抑制劑) 91 4.3 Factors affecting the rate of enzymatic reactions 2 Non-competitive inhibitors substrate noncompetitive inhibitor shape not similar • do not compete for active sites 92 4.3 Factors affecting the rate of enzymatic reactions 2 Non-competitive inhibitors active site changes shape 93 4.3 Factors affecting the rate of enzymatic reactions 2 Non-competitive inhibitors not fit together! reaction rate decreases 94 4.3 Factors affecting the rate of enzymatic reactions 2 Non-competitive inhibitors • increasing substrate concentration cannot increase reaction rate 95 4.3 Factors affecting the rate of enzymatic reactions 2 Non-competitive inhibitors • examples: cyanide heavy metals 96 4.3 Factors affecting the rate of enzymatic reactions 4.4 Video Investigation of the effect of inhibitors on enzyme activity 1 Add Benedict’s solution to test tubes 1 to 3. 2 Prepare test tubes A to C. A B C copper(II) silver distilled suphate nitrate + water + +sucrose sucrose sucrose 97 4.3 Factors affecting the rate of enzymatic reactions 4.4 3 Add 10 drops of invertase solution to test tubes A to C. Leave the tubes at room temperature for 5 minutes. 98 4.3 Factors affecting the rate of enzymatic reactions 4.4 4 Pour Benedict’s solution in test tubes 1 to 3 into test tubes A to C respectively. Shake the tubes gently. Put the test tubes into a boiling water bath for 10 minutes. boiling water 99 4.3 Factors affecting the rate of enzymatic reactions 4.4 5 Allow the tubes stand for 15 minutes. Measure the depth of any brick-red precipitate settled in the test tubes. 100 4.3 Factors affecting the rate of enzymatic reactions 4.4 Results and discussion • Precipitate is formed in control set-up (tube C). No precipitate is formed in tubes A and B. • The results show that copper(II) ion and silver ion are inhibitors of enzyme invertase. Their presence slows down the action of invertase on sucrose. 101 4.3 Factors affecting the rate of enzymatic reactions 1 Effect of temperature on enzymes: Temperature Enzymes Low temperature Inactive Optimum Work best temperature High temperature Denatured 102 4.3 Factors affecting the rate of enzymatic reactions 2 Effect of pH on enzymes: pH Enzymes Optimum pH Work best Extreme pH Denatured 103 4.3 Factors affecting the rate of enzymatic reactions 3 Difference between competitive and non-competitive inhibitors: NonCompetitive competitive Shape of molecule Are they similar to Similar Not similar substrate? 104 4.3 Factors affecting the rate of enzymatic reactions 3 Difference between competitive and non-competitive inhibitors: Action NonCompetitive competitive Compete Change the What is their shape of for active mode of action? enzyme site 105 4.3 Factors affecting the rate of enzymatic reactions 3 Difference between competitive and non-competitive inhibitors: NonCompetitive competitive Will the rate of Increased substrate No Yes enzymatic reaction concentration increase? 106 4.4 Applications of enzymes • used to produce useful commercial products 107 4.4 Applications of enzymes • example: lipases and proteases to remove stains containing lipids and proteins biological washing powder 108 4.4 Applications of enzymes • example: a protease extracted from papaya papain to soften meat meat tenderizer 109 4.4 Applications of enzymes • example: cheese extracted from young cows’ stomach proteases to coagulate (凝固) milk in cheese production 110 4.4 Applications of enzymes • example: enzymes to modify starch to keep the bread soft bread 111 4.4 Applications of enzymes • example: enzymes to break down plant cell walls so that the juice looks less cloudy fruit juice 112 4.4 Applications of enzymes • example: enzymes to remove hairs from hides (牛皮) to soften leather leather 113 4.4 Applications of enzymes What are the advantages of using enzymes? 114 4.4 Applications of enzymes 1 Specific in action • reduce the production of unwanted products 115 4.4 Applications of enzymes 2 Efficient in small amount • lower the cost of production 116 4.4 Applications of enzymes 3 Work at moderate conditions • extreme and expensive conditions not required e.g. high temperature high pressure 117 4.4 Applications of enzymes 4.5 Investigation of protease activities in different fruit juices 1 Heat the end of a cork borer in a Bunsen flame and allow it to cool. 118 4.4 Applications of enzymes 4.5 2 Gently press the borer down into the milk-agar plate to make five wells. Replace the lid quickly. milk agar plate cork borer well 119 4.4 Applications of enzymes 4.5 3 Use a clean dropper to fill the wells A–D with pineapple juice, kiwi fruit juice, papaya juice and guava juice. Fill well E with distilled water. different fruit juices distilled water 120 4.4 Applications of enzymes 4.5 4 Replace the lid. Incubate the plate at 35˚C for one hour. incubator 121 4.4 Applications of enzymes 4.5 5 Measure the diameter of the clear zones around the wells by placing the plate on graph paper and examining against light. 122 4.4 Applications of enzymes 4.5 Results and discussion • Clear zones are observed around the wells containing fruit juices and their diameters are different. • The well containing distilled water is a control. No clear zone is formed around it. 123 4.4 Applications of enzymes 4.5 Results and discussion • The results show that pineapple, kiwi fruit, papaya and guava contain proteases that can break down proteins, but the activities of the proteases differ from one another. 124 4.4 Applications of enzymes 4.6 Video Design an investigation of the effectiveness of different biological washing powder Which brand of biological washing powder is the most effective in removing food stains? Design an investigation to find this out. 125 4.4 Applications of enzymes Enzyme are widely used in industry to produce useful products e.g. biological washing powder and meat tenderizers . They are also important in food industries, breweries and leather industries. 126 1 What are enzymes? Enzymes are biological catalysts. They speed up metabolic reactions in organisms. enzyme 127 2 What is the importance of enzymes to organisms? Without enzymes, metabolic reactions will not proceed enzyme under the relatively low temperatures. 128 3 What is the advantage of using enzymes in the making of stonewashed jeans? This can shorten the time of jean production. enzyme 129 Enzymes lower the energy barrier therefore speed up metabolic reactions include anabolic catabolic reactions reactions 130 Enzymes have an active site shows specificity can be explained by lock-and-key hypothesis 131 Enzymes activities affected by temperature pH inhibitors too low too high causes causes extreme values cause inactivation denaturation of enzymes of enzymes 132 inhibitors may be competitive non-competitive 133