Domains, Kingdoms, and Phyla Grouping Organisms And Classification Age of Life on Earth • 3.5 billion years ago (prokaryotes came first) • 1.5 million species have been named by classification system called taxonomy (to name and group organisms in a logical manner) Taxonomy • Discipline where scientists classify organisms and assign them a scientific name Domains 3 largest classification groups Archaea Eubacteria Eukarya THREE Domains …Kingdoms Eubacteria Archaea Prokaryotic (no true nucleus) (true bacteria) (extreme bacteria) Eukarya (true nucleus) (protists fungi plants animals) TAXONS • Domain (3): Archaea, Eubacteria, Eukarya • Kingdom (6) • Phylum • Class • Order • Family • Genus • Species TAXONS: levels of taxonomy Kingdom Phylum Class Order Family Genus Species King Phillip Came Over From Great Spain memorize LINNAEAN CLASSIFICATION OF HUMANS Kingdom: Animalia Phylum: Chordata Class: Mammalia Order: Primates Family: Hominidae Genus: Homo Species: sapiens This is the one organism you need to memorize. Ever hear of E. coli? • It is the abbreviated form of the scientific name of Escherichia coli T. rex. • Tyrannosaurus rex • Often lazy scientists just abbreviate the Genus with just a letter. binomial nomenclature • is the two part name of organisms. two terms: the genus name and the species • Example: Common name = sugar pine Scientific name = Pinus lambertiana • ponderosa pine: Pinus ponderosa lodgepole pine: Pinus contorta Some Unusual Names • Calponea harrisonfordi (spider) Named after Harrison Ford in appreciation of his narrating a documentary. • Lalapa lusa (tiphiid wasp) • Phytophthora infestans (fungus of the Irish potato famine) • Tabanus nippontucki (horse fly) • Gelae baen (fungus beetle) Escherichia coli or Escherichia coli • Genus first letter is CAPITALIZED (written first) • Species is lower case • Written in Latin • Italicized OR underlined How do you write scientific name for humans? • Homo sapiens • OR • Homo sapiens Carolus Linnaeus: devised the binomial nomenclature system • Studied medicine • Disappointed parents that he did not enter priesthood • Studied plants to make medicines 1707-1778 Our Hero Linnaeus’ Botanical Garden Classification Chart of Primates Where do the name come from? • Often they are Latin words, but they may also come from Ancient Greek, from a place, from a person (preferably a naturalist), a name from a local language, etc. In fact, taxonomists come up with specific descriptors from a variety of sources, including inside-jokes and puns. Some Unusual Names • Calponea harrisonfordi (spider) Named after Harrison Ford in appreciation of his narrating a documentary. • Lalapa lusa (tiphiid wasp) • Phytophthora infestans (fungus of the Irish potato famine) • Tabanus nippontucki (horse fly) • Gelae baen (fungus beetle) Dichotomous Key • An identification key, also known as a dichotomous key, is a method of deducing the correct species assignment of a living thing. Two Ways to Make the Key • "Dichotomous" means "divided into two parts". Therefore, dichotomous keys always give two choices in each step. • • • • • • • • • • 1 A. Metal....................................................go to 2 1 B. Paper....................................................go to 5 2 A. Brown (copper)........................................penny 2 B. Silver....................................................go to 3 3 A. Smooth edge...........................................nickel. 3 B. Ridges around the edge...............................go to 4 4 A. Torch on back..........................................dime 4 B. Eagle on back...........................................quarter 5 A. Number 1 in the corners...............................$1 bill 5 B. Number 2 in the corners...............................$2 bill EEK! - Dichotomous Tree Key (click Here) All Tree Leaves • Needles Broadleaf Avoid using subjective terms: colors, big/small (numbers are better) Can use tree guides. Tips • Better if the choice a positive one something "is" instead of "is not". • If possible, start both choices of a pair with the same word. • 1. a. leaves with lobes • b. leaves single (no lobes) Some common terms • lobed and one entire • » serrated Some examples • Round, serrated Base not even • Teeth wide, sunken veins Examples • Four pointed lobes • Deep lobes almost to rib Leaflets across Some even have more than one shape on the same tree Get Handout: Good Tips • Make a dichotomous key of 15 leaves • One key/lab table • Use 4 feet of white paper • Use measurements (5 cm) rather than terms like "large" and "small". • Use terms others would understand. • Always make two choices. • Leaves will be taped at the end of the division. Comparing Prokaryotic and Eukaryotic • PROKARYOTIC • No true nucleus (called a nucleoid) • smaller • EUKARYOTIC • True nucleus with a membrane • larger • Comparing prokaryotic and eukaryotic Six Kingdoms: Get Handout Two Domains are Prokaryotic • Genetic material NOT in a nucleus (called a nucleoid instead) • INCLUDES: 1. Eubacteria –true bacteria 2. Archaea – extreme bacteria (sometimes “archaebacteria”) • Bacteria Youtube (Archaea and Eubacteria) (2:33) Kingdom: Archaea or Archaebacteria) • Prokaryotic –no true nucleus • Cell walls with no peptidoglycan (see next slide) • Unicellular – one celled • Live in most extreme environments FYI: Discovered • Discovering Archaea (3:24) 1977 What is peptidoglycan? • A cross-linked complex of polysaccharides (sugars) and peptides (proteins) found in the cell walls of bacteria Kingdom: Archaea • Thermophiles –love heat • Psychrophiles –cold-loving • Acidophiles –love acidic environments • Halophiles-love salty • Barophiles-high pressure (ocean bottom) Archaea Examples • Thermus aquaticus (Extremophiles Youtube) Found in hot springs Archaea Examples A-thermophile B-halophile C-halophile D-carbonatphile E-halophile F-calcium carbonatphile -What are extremophiles? (54 secs) -Extremophiles (1:25) -Bozeman Biology: Archaea (7:16) Kingdom: EUBACTERIA (true bacteria) • Prokaryotic – no true nucleus (just a nucleoid) • Cell wall with peptidoglycan • Unicellular –one-celled • Diverse environments and metabolism Eubacteria (Common) • Staphylococcus • Anthracis bacillus • Escherichia coli • Streptococcus Eubacteria Examples • Neisseria gonorrhoeae • Staphylococcus aureus(skin) Domain: Eukarya HAVE A NUCLEUS (membrane around the Genetic material) Includes 4 Kingdoms: Protists Fungi Animals Plants Kingdom: Protista • Eukaryotic – DO have a nucleus • Usually unicellular • Varied cell walls • (Plant-like, animallike, fungus –like) PROTISTA • Plant-like protists (have chlorophyll) • Animal-like protists (Move) Fungus-like protists (slime molds move like amoeba, decomposer) Protista Examples Protist Youtube Euglena • Paramecium Stentor Volvox (colonial) Kingdom: FUNGI • Eukaryotic • Cell walls of chitin – stiffener • Can be multicellular or unicellular Fungi • Yeast (unicellular fungi) • Can you see the budding? More Fungi • Bracket Fungus Toenail Fungus Bread mold More Fungi • Penicillium Black Mold Hot dog mold Kingdom: Plantae • Eukaryotic • Cell wall made of cellulose • Multicellular –more than one cell • Autotrophic – photosynthetic – make their own food What is cellulose? Stiff, interlocking fibers in plants Examples: Kingdom: Animalia • • • • Eukaryotic No cell wall Multicellular Heterotrophic –need to get food from other sources (plants and animals) Animalia What kingdom are you?