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OpenStax Microbiology Chapter 3 The Cell

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The Cell
OpenStax Microbiology Chapter 3
Spontaneous Generation: Objectives
Explain the theory of spontaneous generation and why people once accepted
it as an explanation for the existence of certain types of organisms
Explain how certain individuals tried to prove or disprove spontaneous
generation
Spontaneous Generation
• What is it?
• Early experiments
•
•
•
•
Van Helmont – Mice from rags
Francesco Redi – meat jars
Needham – boiled broth
Spallanzani – boiled broth
Disproving Spontaneous
Generation
• Swan-neck flask
• Irrefutably disproved spontaneous
generation
• “Life only comes from life”
• “life is a germ and a germ is life. Never will the
doctrine of spontaneous generation recover
from the mortal blow of this simple
experiment.”
Foundations
of Modern
Cell Theory:
Objectives
Explain
Explain the key points of cell theory and
the individual contributions of Hooke,
Schleiden, Schwann, Remak, and Virchow
Explain
Explain the key points of endosymbiotic
theory and cite the evidence that
supports this concept
Explain
Explain the contributions of Semmelweis,
Snow, Pasteur, Lister, and Koch to the
development of germ theory
Origins
• Robert Hooke
• Coined the term ‘cell’
• Matthias Schleiden
• Plant cells
• Crystallization
• Theodor Schwann
• Similarities between plant and animal cells
• Virchow and Remak
• All cells arise from cells
Endosymbiotic theory
• Discovery of mitochondrial and
chloroplast DNA in the 1960s
• Resurrection of endosymbiotic
theory
• Mitochondria and Chloroplasts
• Arose from prokaryotic cells
• Relationship with eukaryotic host
The Germ Theory of Disease
• Ignaz Semmelweis
• Handwashing
• John Snow
• Epidemiology
• Louis Pasteur
• If microbes spoil food, they could cause infection
• Robert Koch
• Postulates
• Joseph Lister
• Carbolic acid
Cell and Germ theory: A timeline
Explain
Unique
Characteristics
of Prokaryotic
Cells: Objectives
Explain the distingui9shing characteristics of
prokaryotic cells
Describe
Describe common cell morphologies and cellular
arrangements typical of prokaryotic cells and explain
how cells maintain their morphology
Describe
Describe internal and external structures of
prokaryotic cells in terms of their physical structure,
chemical structure, and function
Compare
Compare the distinguishing characteristics of
bacterial and archaeal cells
The Typical Prokaryote
• All cells contain
•
•
•
•
Cytoplasm
Ribosomes
DNA
Cell membrane
Common Cell Morphologies
• Streptococcus pyogenes
• Strep throat
• Bacillus cereus
• Food borne
• Vibrio cholera
• Cholera
• Haemophilus influenzae
• Pneumoniae
• Aquaspirillum serpens
• Fresh Water
• Borrelia burgdorferi
• Lyme disease
Common arrangements
Tonicity Review
• Osmosis and water movement
• Microbiological media
• Isotonic
• Hypertonic
• Hypotonic
The Nucleoid
• Contains DNA
• DNA associated proteins
• Nucleoid associated proteins
• Assist in packaging of
chromosome
Bacterial Plasmids
• Extrachromosomal
• Advantageous traits
This Photo by Unknown Author is licensed under CC BY-SA
Ribosomes
• Protein production
• Found in cytoplasm
• 70s (Svedberg unit)
Inclusions
• Store excess materials
• Nutrients
• Metachromatic granules
• Store phosphate
• Sulfur granules
• Magnetosome
• Align cells to magnetic field
• Gas vacuoles
• Alter buoyancy
• Carboxysomes
• RuBisCO and carbonic anhydrase
Endospores
• Survival and Protection
• Unfavorable environmental
conditions
• Sporulation
• Lets walk through the steps
• Germination
• Once living conditions improve
• Clinically significant
• Bacillus
• Clostridium
Plasma Membrane
• Fluid mosaic model
• Things move
• Selective permeability
• Things go in and out
Diffusion
• NO ATP
• Passive process
• High to Low
Facilitated diffusion
• NO ATP
• Passive
• Charged and Large Molecules
Active Transport
• ATP required
• Active
• Low to High
The Cell Wall
• Protection of cell
• Peptidoglycan
• Only in bacteria
• Target of antibiotics
• Gram stain
Gram + vs Gram • Layers of peptidoglycan
• Outer Membrane
Acid-fast cell wall
• Mycolic acid
• Mycobacterium
Glycocalyces and S-layers
• Capsule
• Organized layer
• Polysaccharides or proteins
• Slim layer
• Less organized
• Polysaccharides, glycoproteins, or
glycolipids
• S-Layer
• Structural proteins and
Glycoproteins
• Outside the cell wall
• THE cell wall for some Archea
Fimbriae and Pili
• Fimbriae
• Short, bristle like proteins
• Attachment
• Pili
• F plius
• Transfer of DNA
Flagella
• Help cells move
• Basal body
• Motor
• Embedded in plasma membrane
• Hook
• Connects basal body to filament
Flagellar arrangements
• Different bacteria have
different patterns
•
•
•
•
Vibrio cholerae
Spirillum minor
Pseudomonas aeruginosa
Escherichia coli
Run and Tumble
• Movements depend on flagellar configuration
• Move in response to various stimuli
• Light (phototaxis)
• Magnetic fields (magnetotaxis)
• Chemicals (chemotaxis)
• Runs
• Counterclockwise rotation and streamlined
• Tumbles
• Clockwise rotation and splayed out
Explain
Unique
Characteristics
of Eukaryotic
Cells: Objectives
Explain the distinguishing characteristics of
eukaryotic cells
Describe
Describe internal and external structures of
eukaryotic cells in terms of their physical structure,
chemical structure, and function
Identify
and
describe
Identify and describe structures and organelles
unique to eukaryotic cells
Compare
and
contrast
Compare and contrast similar structures found in
prokaryotic and eukaryotic cells
Eukaryotic Structure Review
• Lets review cell structure/function
Eukaryotic cell shape
• Chromulina alga
• Trypanosoma
• Vorticella
• Paramecium
• Plasmodium
The Nucleus
• Command center
• Contains DNA
• Nuclear envelope
• Allows movement in and out
• Nuclear lamina
• Intermediate filaments
Nucleolus
• Site of rRNA synthesis
• Ribosomes
The Endomembrane System
• Endoplasmic reticulum
• Rough ER
• Smooth ER
• Golgi apparatus
• Protein packaging
• Protein modification
• Lysosomes
• Digestive enzymes
Peroxisomes
• Produce H2O2
• Lipid synthesis
• Can specialize
• Glyoxysomes
• glycosomes
The Cytoskeleton
• Microfilaments
• Two actin strands
• Amoeboid movement
• Stability in cytoplasm
• Intermediate filaments
• Cables within the cell
• Maintain position of nucleus
• Anchoring cells
• Microtubules
• Tubulin dimers
• Girders within cytoskeleton
• Movement
Mitochondria
• Cellular powerhouse
Chloroplast
• Site of photosynthesis
The Plasma Membrane
• Selectively permeable
• Molecule types
Membrane Transport
• Endocytosis
• Phagocytosis
• Cell eating
• Pinocytosis
• Cell drinking
• Receptor mediated
endocytosis
• Ligands and receptors
Cell Wall and
Extracellular Matrix
• Cell wall
•
•
•
•
•
Fungi
Algae
Plants
Protists
Structural support
• Maintains shape and
stability
Flagella and Cilia
• Cellular movement
• Flagella
• 9+2 arraignment of microtubules
• Dynein motor proteins
• Cilia
•
•
•
•
Unique to eukaryotes
9+2 arrangement
Cover cell surface
Feeding
• Basal body
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