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Inducible gene targeting

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I
nduci
bl
egenet
ar
get
i
ng
(
TheCr
el
oxsy
st
em)
I
tI
ti
samet
hodofgenet
ar
get
i
ngt
hatal
l
owst
hei
nduci
bl
ei
nact
i
v
at
i
onofat
ar
get
gene.I
twaspr
esent
edi
nmi
ce.
I
nduci
bl
egeneexpr
essi
onsy
st
emsar
ef
av
or
edov
erst
abl
eexpr
essi
onsy
st
emsi
na
wi
dev
ar
i
et
yofbasi
candappl
i
edr
esear
char
eas,
i
ncl
udi
ngf
unct
i
onal
genomi
cs,
gene
t
her
apy
,
t
i
ssueengi
neer
i
ng,
bi
ophar
maceut
i
cal
pr
ot
ei
npr
oduct
i
onanddr
ugdi
scov
er
y
.
Thi
si
sbecauset
heyar
emost
l
yr
ev
er
si
bl
eandt
husmor
ef
l
exi
bl
et
ouse.Fur
t
her
mor
e,
compar
edt
oconst
i
t
ut
i
v
eexpr
essi
on,
t
heygener
al
l
yexhi
bi
tahi
gheref
f
i
ci
encyandhav
e
f
ewersi
deef
f
ect
s,
suchascel
l
deat
handdel
ay
edgr
owt
hordev
el
opment
.Empower
ed
bydecadesofdev
el
opmentofi
nduci
bl
egeneexpr
essi
onsy
st
ems,
r
esear
cher
scannow
ef
f
i
ci
ent
l
yact
i
v
at
eorsuppr
essanygene,
t
empor
ar
i
l
yandquant
i
t
i
v
el
yatwi
l
l
,
dependi
ng
onexper
i
ment
al
r
equi
r
ement
sanddesi
gns.
Thef
actt
hatsomel
et
hal
i
t
y
causi
nggenesoressent
i
al
genesar
ei
mpossi
bl
et
o
ov
er
expr
essorknockout
,
f
i
net
uni
ngt
hei
rexpr
essi
oni
snecessar
yf
ort
heanal
y
si
sof
t
hei
rf
unct
i
on.Mor
eov
er
,
t
hei
r
r
ev
er
si
bl
emani
pul
at
i
onofgeneexpr
essi
onof
t
endr
i
v
es
compensat
or
yadapt
at
i
oni
nhi
gheror
gani
sms.Ther
ef
or
e,
t
heabi
l
i
t
yt
oswi
t
cht
hegene
expr
essi
ononandof
fort
omodul
at
et
hel
ev
el
ofgeneexpr
essi
oni
naquant
i
t
at
i
v
eand
t
empor
al
waycanpr
ef
er
ent
i
al
l
yr
ev
eal
t
hedi
r
ectconsequenceofacer
t
ai
ngenet
i
c
changeandpr
ov
i
deanaddi
t
i
onal
f
i
l
t
ert
oexcl
udeot
hersi
de-andof
f
t
ar
getef
f
ect
s.Thi
s
i
sespeci
al
l
ybenef
i
ci
al
whenwor
ki
ngwi
t
hmammal
i
ancel
l
st
hatar
emai
nt
ai
nedand
cont
r
ol
l
edbyhi
ghl
yi
nt
r
i
cat
egenet
i
cnet
wor
ks.
Themet
hodusesani
nt
er
f
er
onr
esponsi
v
epr
omot
ert
ocont
r
ol
t
heexpr
essi
onofCr
e
r
ecombi
nase.Her
e,
Cr
ewasusedt
odel
et
easegmentoft
heDNApol
y
mer
ase[
bet
a]
genef
l
ankedbyl
oxPr
ecombi
naser
ecogni
t
i
onsi
t
es.Del
et
i
onwascompl
et
ei
nl
i
v
erand
near
l
ycompl
et
ei
nl
y
mphocy
t
eswi
t
hi
naf
ewday
s,
wher
easpar
t
i
al
del
et
i
onwas
obt
ai
nedi
not
hert
i
ssues.Thi
smet
hodcanbeusedf
ort
hei
nduci
bl
ei
nact
i
v
at
i
onofany
ot
hergenei
nv
i
v
o.
TheuseofCr
e/
l
oxPr
ecombi
nat
i
onsy
st
em i
ngenet
ar
get
i
ng
Cr
er
ecombi
nasei
s
a38kDapr
ot
ei
n
f
r
om t
he
bact
er
i
ophageP1
t
hatmedi
at
es
i
nt
r
amol
ecul
arand
i
nt
er
mol
ecul
arsi
t
especi
f
i
c
r
ecombi
nat
i
on
bet
weent
wol
oxP
si
t
es(
l
ocusofXov
erofP1)
.Thel
oxPsequencei
s34bpl
ongandconsi
st
soft
wo13bp
i
nv
er
t
edr
epeat
ssepar
at
edbyan8bpnonpal
i
ndr
omi
c(
asy
mmet
r
i
c)
sequencewhi
chdi
ct
at
est
heor
i
ent
at
i
onoft
heov
er
al
l
l
oxPsi
t
e.Twol
oxP
sequencesi
nopposi
t
eor
i
ent
at
i
onmedi
at
et
hei
nv
er
si
onoft
hei
nt
er
v
eni
ng
DNAbyCr
er
ecombi
naser
at
hert
hant
hanexci
si
onwhi
l
et
wosi
t
esi
nt
he
sameor
i
ent
at
i
onmedi
at
eexci
si
onoft
hei
nt
er
v
eni
ngDNAbet
weent
he
si
t
esaf
t
erwhi
chonl
yonel
ox
Psi
t
er
emai
ns.I
ft
hel
oxPsi
t
esar
el
ocat
edon
di
f
f
er
entchr
omosomes,
Cr
er
ecombi
nasecanmedi
at
eachr
omosomal
t
r
ansl
ocat
i
on
(
A)Si
ngl
el
oxPsi
t
et
hatcont
ai
nst
woi
nv
er
t
ed13bpr
epeat
s,
separ
at
edbyan
asy
mmet
r
i
c8bpl
ongsequence.Thet
y
peofCr
emedi
at
edr
ecombi
nat
i
oni
sdependent
ont
heor
i
ent
at
i
onandl
ocat
i
onoft
hel
oxPsi
t
es.
(
B)Cr
eexci
sesaci
r
cul
armol
ecul
ef
r
om bet
weent
wol
oxPsi
t
espl
acedi
nt
hesame
or
i
ent
at
i
on.
(
C)Cr
ei
nv
er
t
st
heDNAsequencebet
weent
wol
oxPsi
t
esposi
t
i
onedi
nopposi
t
e
or
i
ent
at
i
on.
(
D)Cr
emedi
at
edr
ecombi
nat
i
onbet
weent
wodi
f
f
er
entl
i
nearDNAmol
ecul
es(
e.
g.
chr
omosomes)
,
eachcont
ai
ni
ngal
oxPsi
t
e,
r
esul
t
i
ngi
nt
heexchangeoft
heDNA
r
egi
onsf
l
anki
ngt
hel
oxPsi
t
es.
Condi
t
i
onalgenet
ar
get
i
ngusi
ngt
heCr
e/
l
oxPr
ecombi
nat
i
onsy
st
em :
TheCr
e/
l
oxPsy
st
em hasemer
gedasausef
ul
t
ool
i
ngenet
i
cmani
pul
at
i
ons(
86)
.Gener
al
l
y
,
any
DNAsequenceofi
nt
er
estcanbedel
et
edbyf
l
anki
ngi
twi
t
hl
oxPsi
t
es.Cr
e/
l
oxPenabl
es,
f
or
exampl
e,
t
hedel
et
i
onoft
hesel
ect
i
onmar
keraf
t
ersuccessf
ul
i
nt
egr
at
i
onoft
het
ar
get
i
ngv
ect
or
i
nt
ot
hegenomeofEScel
l
sormi
ce.Thel
oxPsi
t
escanbei
nt
r
oducedi
nt
ot
hegenomi
cl
ocusof
i
nt
er
estbyhomol
ogousr
ecombi
nat
i
onasdescr
i
bedabov
e.Fur
t
her
mor
e,
t
hecondi
t
i
onal
(
t
i
mel
y
orspat
i
al
l
ycont
r
ol
l
ed)expr
essi
onofCr
er
ecombi
naseenabl
est
odet
er
mi
ne,
wher
e(
e.
g.i
n
whi
chcel
l
t
y
peort
i
ssue)andwhen(
atwhi
cht
i
meofmouse’
sl
i
f
eorofdev
el
opment
al
st
ageof
cel
l
s/
t
i
ssues)t
hedel
et
i
onoft
hef
l
oxedDNAsequenceshoul
doccur
.Thus,
f
orcondi
t
i
onal
si
t
especi
f
i
cgenomemodi
f
i
cat
i
on,
t
womousel
i
nesar
eusual
l
yneeded.
 Fi
r
st
,
mi
cet
hathav
eDNAsequenceofi
nt
er
estf
l
ankedbyl
oxPsi
t
es(
f
l
oxed)
.
 Second,
Cr
er
ecombi
naset
r
ansgeni
cmi
ce,
i
nwhi
chCr
ei
sexpr
essedundert
hecont
r
ol
ofapr
omot
ert
hati
sact
i
v
ei
nspeci
f
i
ccel
l
t
y
pesort
i
ssues,
orCr
ei
st
r
ansi
ent
l
y
expr
essedundert
hecont
r
ol
ofapr
omot
ert
hati
sact
i
v
eatapar
t
i
cul
ardev
el
opment
al
st
ageoft
i
ssuesorcel
l
s.
Whencr
ossi
ngt
hef
l
oxedmousewi
t
haCr
et
r
ansgeni
cmouse,
t
hef
l
oxedDNAsequencei
s
subsequent
l
ydel
et
edi
nt
hecel
l
t
y
pesort
i
ssues,
wher
eCr
ei
sexpr
essed.Col
l
ect
i
ondat
abases
ofsev
er
al
hundr
edsofCr
et
r
ansgeni
cmousel
i
nesexpr
essi
ngt
heCr
er
ecombi
nasei
nspeci
f
i
c
t
i
ssuesorcel
l
sar
eav
ai
l
abl
e.
TheCr
e/
l
oxPsy
st
em enabl
esnotonl
yt
hedel
et
i
on(
shutof
f
)ofgenesofi
nt
er
est
,
buthasbeen
pr
ov
edt
obesuccessf
ulal
sot
ospeci
f
i
cal
l
yt
ur
non(
act
i
v
at
e)t
heexpr
essi
onofanygene(
or
t
r
ansgene)ofi
nt
er
est
.
Fort
hi
s,
t
hegeneofi
nt
er
esti
sr
ender
edqui
escente.
g.byi
nt
er
posi
ngf
l
oxedpol
y
adeny
l
at
i
on
si
gnal
sequencesmedi
at
i
ngpr
emat
ur
et
r
anscr
i
pt
i
onar
r
estwi
t
hi
n.Af
t
eri
nt
er
cr
ossi
ngwi
t
haCr
e
t
r
ansgeni
cmouseordel
i
v
er
yofCr
ei
nt
of
l
oxedt
r
ansgeni
cmi
ceusi
nge.
g.Cr
eexpr
essi
ng
adenov
i
r
uses,
t
hef
l
oxedpol
y
adeny
l
at
i
onsi
gnal
sequencescanber
emov
edbyCr
emedi
at
ed
exci
si
on,
r
esul
t
i
ngi
nt
heact
i
v
at
i
onoft
hegeneexpr
essi
oni
naspeci
f
i
ccel
l
t
y
peort
i
ssue.
Si
gni
f
i
canceofCr
eLoxsy
st
em —
SuchCr
e/
l
oxPmedi
at
edgeneact
i
v
at
i
onhasbeenausef
ul
appr
oacht
oav
oi
dhar
mf
ul
ef
f
ect
sof
t
het
r
ansgenedur
i
ngmouseembr
y
ogenesi
s,
ort
hei
nduct
i
onofi
mmunet
ol
er
anceagai
nstt
he
t
r
ansgenepr
oduct
,
f
orexampl
ei
nt
hecaseofv
i
r
al
genes.Fori
nst
ance,
t
heappl
i
cat
i
onoft
he
Cr
e/
l
oxPt
echnol
ogyhasenabl
edt
ogener
at
et
r
ansgeni
cmi
cet
hatcondi
t
i
onal
l
yexpr
esshuman
hepat
i
t
i
sCv
i
r
ust
r
ansgenesuponi
nt
r
av
enousadmi
ni
st
r
at
i
onofCr
eexpr
essi
ngadenov
i
r
us,
and
t
husenabl
edt
hei
nv
est
i
gat
i
onoft
hei
mmuner
esponsest
oandpat
hogenesi
sofHCVi
nf
ect
i
on.
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