Chapter8 Gene Regulation & Mutations Gene Regulation • All cells have all the instructions in their DNA to make all proteins, but they only use the sections of DNA or genes that they need. -Promoters are essential to the initiation of transcription -Regulatory sites also exist near the promoter that can regulate transcription -These proteins can decide whether a gene gets turned on or off *Makes gene expression a regulated process Gene Regulation • Examples in organisms: Prokaryotes – contain operons which are groups of genes that operate together -presence of a certain sugar or protein will activate transcription and the gene will be expressed -repressor proteins exist that can inhibit transcription and turn the gene off Gene Regulation Eukaryotes : - no operons - utilize a DNA sequence called a TATA box that helps position RNA polymerase after promoter sequence - other enhancer sequences exist to regulate transcription- wide variety of protein binding can take place - DNA binding proteins can still block access to genes and act like a repressor Differentiation Eukaryotic differences: *Cell specialization requires genetic specialization - During embryonic development cells differentiate – meaning they will specialize in structure and function to an area of the body needed Hox genes- series of genes that develop in the embryo and serve master control genes of differentiation *mutation to a hox gene will completely change the organs in specific parts of the body ex: fruit fly with legs on head instead of antennae Epigenome • The epigenome consists of chemical compounds that modify, or mark, the genome in a way that tells it what to do, where to do it, and when to do it. • Different cells have different epigenetic marks. • The environment causes changes in our epigenetics. http://video.pbs.org/video/1525107473# Development and Differentiation • Similarities exist in the way organisms regulate genes *Transcription is the regulating process which will determine what is turned on and off -series of genes work together to shape the organism (either operons or hox type genes) -common patterns of genetic control exist because all these genes descended from one common ancestor MuTaTiOnS • Mutations- changes in the genetic material - caused by mistakes in copying DNA - skipped base or incorrect bases can slip by undetected by the proofreading polymerase - can be product of a single gene or a whole chromosome Types of Mutations • Gene Mutations 1. Point mutations 2. Frameshift mutation • Chromosomal Mutations 1. Deletion 2. Duplication 3. Inversion 4. Translocation Gene Mutations • Point mutation – change in one of the base pairs in the sequence Ex: substitution of a base will change the amino acid that is coded The fat cat ate the wet rat. The fat cat ate the wee rat. • What kind of effect would result? • Overall effect may not even be noticeable or change anything about the cell Gene Mutations • Frameshift mutations - alteration of the reading frame of the genetic message from the insertion or deletion of a nucleotide. Insertion – adds an extra codon or base in original sequence The fat cat ate the wee rat. The fab tca tat eth ewe era t. • Notice any changes? Gene Mutations • Deletions – removes a codon or base from the sequence The fat cat ate the wee rat. The fat cat att hew eer at. • Where is the change? • Will these be the same amino acids? Chromosomal Mutations • Involves changing the number or structure of the chromosome -can change the location of certain genes and even the number of copies of that gene Chromosomal Mutations • 4 types of mutations: 1. Deletions- involve loss of all or part of chromosome 2. Duplication – produces extra copies of parts of the chromosome 3. Inversions – reverses the direction of parts of the chromosome. The fat cat ate the wee rat. The fat tar eew eht eta tac. 4. Translocation – part of one chromosome breaks off and attaches to another. The fat cat ate the wee rat. e the wee rat.The fat cat at Overall Result • Mutation will improperly group codons downstream • unless at the end, will likely produce a nonfunctional protein • it may be transmitted to offspring and to future generations • If adversity is great enough to effect the phenotype of organism it is referred to as a genetic disorder