Lecture 3 THE CHEMISTRY OF LIVING THINGS III. Atoms Combine to Form Molecules C. Three types of Bonds Table 2.1 III. Atoms Combine to Form Molecules Covalent Bond Figure 2.6 Covalent Bonds III. Atoms Combine to Form Molecules Ionic Bond Figure 2.7 Ionic Bonds Hydrogen Bonds IV. Elements of Living Organisms Table 2.2 V. Life Depends on Water A. Water molecules are polar B. Water is liquid at body temperature C. Water can absorb & hold heat energy V. Life Depends on Water D. Two Important Biological Functions of Water 1. Water is the biological Solvent 2. Water helps regulate body temperature Water Keeps Ions in Solution Figure 2.9 VI. The Importance of Hydrogen Ions A. Acids are proton (hydrogen ion) donors, 1. Bases accept hydrogen ions B. pH Scale = hydrogen ion concentration C. Buffers: minimize pH change 1. Carbonic acid & bicarbonate act as one of body’s most important buffer pairs The pH Scale Figure 2.11 VII. The Organic Molecules of Living Organisms A. Carbon, the building block of living things: 1. Comprises 18% of body by weight 2. Forms four covalent bonds 3. Can form single or double bonds 4. Can build micro- or macromolecules Carbon Can Bond in Many Ways Figure 2.13 VIII. Making & Breaking Biological Macromolecules Figure 2.14 VIII. Making & Breaking Biological Macromolecules A. Dehydration synthesis 1. Removes equivalent of a water molecule to link molecular units 2. Requires energy B. Hydrolysis 1. Adds the equivalent of a water molecule to break apart macromolecules 2. Releases energy IX. Carbohydrates Figure 2.15 IX. Carbohydrates A. Oligosaccharides: short chains of monosaccharides Disaccharides: sucrose, maltose, lactose IX. Carbohydrates B. Polysaccharides: thousands of monosaccarides joined in chains & branches 1. Starch: made in plants; stores energy 2. Glycogen: made in animals; stores energy 3. Cellulose: undigestible polysaccharide made in plants for structural support X. Lipids: Insoluble in Water A. Triglycerides: energy storage molecules Ex: Fatty acids: saturated and unsaturated B. Phospholipids: cell membranes C. Steroids: carbon-based ring structures Ex: Cholesterol: used in making estrogen and testosterone Triglycerides Figure 2.17 Phospholipids & Steroids Figure 2.19 Figure 2.18 Protein Structure Figure 2.18 XI. Proteins: Complex Structures Constructed of Amino Acids A. Structure 1. Primary: amino acid sequence 2. Secondary: describes chain’s orientation in space; e.g., alpha helix, beta sheet XI. Proteins: Complex Structures Constructed of Amino Acids A. Structure 3. Tertiary: describes three-dimensional shape created by disulfide and hydrogen bonds Creates polar and nonpolar areas in molecule 4. Quaternary: describes proteins in which two or more tertiary protein chains are associated Protein Structure Figure 2.18 XI. Proteins: Complex Structures Constructed of Amino Acids XII. Enzyme Function A. Enzymes: 1. proteins 2. function as catalysts 3 facilitate chemical reactions B. The functional shape of an enzyme is dependent on: 1. temperature of reaction medium 2. pH 3. ion concentration 4. presence of inhibitors XII. Structure and Function of Nucleic Acids A. Functions 1. Store genetic information 2. Provide information used in making proteins B. Structure 1. Nucleotides consist of a phosphate group, a sugar, and a nitrogenous base 2. DNA structure is a double helix: two associated strands of nucleic acids 3. RNA is a single-stranded molecule XII. Structure and Function of Nucleic Acids C. DNA: double-stranded 1. Sugar: deoxyribose 2. Nitrogenous bases: adenine, thymine, cytosine, guanine 3. Pairing: adenine-thymine and cytosineguanine XII. Structure and Function of Nucleic Acids D. RNA: single-stranded 1. Sugar: ribose 2. Nitrogenous bases: adenine, uracil, cytosine, guanine 3. Pairing: adenine-uracil, cytosine-guanine Structure and Function of Adenosine Triphosphate (ATP) Figure 2.26