Fig. 12.2 Chapter 12: Patterns of Inheritance Chapter 13: Chromosomes, Mapping, and the Meiosis-Inheritance Connection Patterns of Inheritance Chapter 12 Early Ideas of Heredity • Before the 20th century, 2 concepts were the basis for ideas about heredity: - heredity occurs within species - traits are transmitted directly from parent to offspring • Led to the belief that inheritance is a matter of blending traits from the parents. 3 Early Ideas of Heredity • Botanists in the 18th and 19th centuries produced hybrid plants. • When the hybrids were crossed with each other, some of the offspring resembled the original strains, rather than the hybrid strains. • This evidence contradicted the idea that traits are directly passed from parent to offspring. 4 Fig. 12.3-3 Early Ideas of Heredity • Gregor Mendel • Studied the pea plant: 1. other research showed that pea hybrids could be produced 2. many pea varieties were available 3. peas are small plants and easy to grow 4. peas can self-fertilize or be cross-fertilized 6 Early Ideas of Heredity • Gregor Mendel’s experimental method: - Produce true-breeding strains for each trait he was studying - Cross-fertilize true-breeding strains having alternate forms of a trait – perform reciprocal crosses as well - Allow the hybrid offspring to self-fertilize and count the number of offspring showing each form of the trait 7 8 Fig. 12.3-1 Fig. 12.3-2 Monohybrid Crosses • Monohybrid cross: a cross to study only 2 variations of a single trait • Mendel produced true-breeding pea strains for 7 different traits - each trait had 2 alternate forms (variations) - flower color, pea color, pea shape... • Mendel cross-fertilized the 2 true-breeding strains for each trait 11 Monohybrid Crosses • F1 generation (1st filial generation): - offspring produced by crossing 2 truebreeding strains • For every trait Mendel studied, all F1 plants resembled only 1 parent • No plants with characteristics intermediate between the 2 parents were produced 12 13 Monohybrid Crosses • F2 generation (2nd filial generation): the offspring resulting from the self-fertilization of F1 plants 14 15 16 Monohybrid Crosses • F2 generation (2nd filial generation): the offspring resulting from the self-fertilization of F1 plants - Dominant traits: the form of each trait most commonly expressed in the F1 plants - Recessive traits: the form of the trait not seen in the F1 plants; hidden traits 17 Monohybrid Crosses • F2 plants exhibited both forms of the trait in a very specific pattern: - ¾ plants with the dominant form - ¼ plant with the recessive form • The dominant to recessive ratio was 3 : 1. • Mendel discovered the ratio is actually: - 1 true-breeding dominant plant - 2 not-true-breeding dominant plants - 1 true-breeding recessive plant 18 19 20 Monohybrid Crosses • Gene: information for a trait passed from parent to offspring • Alleles: alternate forms of a gene • Homozygous: having 2 of the same allele • Heterozygous: having 2 different alleles 21 Monohybrid Crosses • Genotype: total set of alleles of an individual - PP = homozygous dominant - Pp = heterozygous - pp = homozygous recessive • Phenotype: outward appearance of an individual - physical manifestation of genotype 22 Monohybrid Crosses • Principle of Segregation: • Two alleles for a gene segregate during gamete formation • homologous chromosome separation during meiosis • Alleles are re-paired at random, one from each parent, during fertilization. 23 24 25 Monohybrid Crosses • Some human traits are controlled by a single gene. - some of these exhibit dominant inheritance - some of these exhibit recessive inheritance • Carriers are heterozygous • Pedigree analysis is used to track inheritance patterns in families. 26 27 28 Dihybrid Crosses • Dihybrid cross: examination of 2 separate traits in a single cross - for example: RR YY x rryy • The F1 generation of a dihybrid cross (RrYy) shows only the dominant phenotypes for each trait. 29 30 Dihybrid Crosses • The F2 generation is produced by crossing members of the F1 generation with each other or allowing self-fertilization of the F1. - for example RrYy x RrYy • The F2 generation shows all four possible phenotypes in a set ratio: 9:3:3:1 31 32 Dihybrid Crosses • Principle of Independent Assortment: • In a dihybrid cross, the alleles of each gene assort independently. 33 Probability – Predicting Results • Rule of addition: the probability of 2 mutually exclusive events occurring simultaneously is the sum of their individual probabilities. • When crossing Pp x Pp, the probability of producing Pp offspring is: • probability of obtaining Pp (1/4), PLUS probability of obtaining pP (1/4) ¼ + ¼ = ½ 34 Probability – Predicting Results • Rule of multiplication: the probability of 2 independent events occurring simultaneously is the PRODUCT of their individual probabilities. • When crossing Rr Yy x RrYy, the probability of obtaining rr yy offspring is: - probability of obtaiing rr = ¼ - probability of obtaining yy = ¼ probability of rr yy = ¼ x ¼ = 1/16 35 Testcross • Testcross: a cross used to determine the genotype of an individual with dominant phenotype - cross the individual with unknown genotype (e.g. P_) with a homozygous recessive (pp) - the phenotypic ratios among offspring are different, depending on the genotype of the unknown parent 36 37 Extensions to Mendel • Mendel’s model of inheritance assumes: - each trait is controlled by a single gene - each gene has only 2 alleles - there is a clear dominant-recessive relationship between the alleles • Most genes do not meet these criteria. • Other types of inheritance: • Polygenic, Pleiotropy, Incomplete dominance, codominance 38 Extensions to Mendel • Polygenic inheritance occurs when multiple genes are involved in controlling the phenotype of a trait. • The phenotype is an accumulation of contributions by multiple genes. • These traits show continuous variation and are referred to as quantitative traits. - For example – human height 39 40 Extensions to Mendel • Pleiotropy refers to an allele which has more than one effect on the phenotype. • This can be seen in human diseases such as cystic fibrosis or sickle cell anemia. • In these diseases, multiple symptoms can be traced back to one defective allele. 41 Extensions to Mendel • Incomplete dominance: the heterozygote is intermediate in phenotype between the 2 homozygotes. • Codominance: the heterozygote shows some aspect of the phenotypes of both homozygotes. 42 43 Extensions to Mendel The human ABO blood group system: -multiple alleles: there are 3 alleles of the I gene (IA, IB, and i) -codominance: IA and IB are dominant to i but codominant to each other 44 45 Extensions to Mendel • The expression of some genes can be influenced by the environment. - for example: coat color in Himalayan rabbits and Siamese cats - an allele produces an enzyme that allows pigment production only at temperatures below 30oC 46 Extensions to Mendel 47 Extensions to Mendel • The products of some genes interact with each other and influence the phenotype of the individual. • Epistasis: one gene can interfere with the expression of another gene 48 49 Chromosomes, Mapping, and the Meiosis-Inheritance Connection Chapter 13 Chromosome Theory • Chromosomal theory of inheritance - developed in 1902 by Walter Sutton - proposed that genes are present on chromosomes - based on observations that homologous chromosomes pair with each other during meiosis - supporting evidence was provided by work with fruit flies 51 Chromosome Theory • T.H. Morgan isolated a mutant white-eyed Drosophila • Red-eyed female X white-eyed male gave a F1 generation of all red eye • Morgan concluded that red eyes are dominant 52 Fig. 13.1 Chromosome Theory • Morgan crossed F1 females X F1 males • F2 generation contained red and white- eyed flies but all white-eyed flies were male • Testcross of a F1 female with a white-eyed male showed the viability of white-eyed females • Morgan concluded that the eye color gene is linked to the X chromosome 54 55 56 Sex Chromosomes • Sex determination in Drosophila is based on the number of X chromosomes - 2 X chromosomes = female - 1 X and 1 Y chromosome = male • Sex determination in humans is based on the presence of a Y chromosome - 2 X chromosomes = female - having a Y chromosome (XY) = male 57 Sex Chromosomes • Sex-linked traits: traits controlled by genes present on the X chromosome • Sex-linked traits show inheritance patterns different than those of genes on autosomes. - In many organisms, the Y chromosome is greatly reduced or inactive. - Genes on the X chromosome are present in only 1 copy in males 58 59 Sex Chromosomes • Dosage compensation ensures an equal expression of genes from the sex chromosomes even though females have 2 X chromosomes and males have only 1. - In each female cell, 1 X chromosome is inactivated and is highly condensed into a Barr body. • Females heterozygous for genes on the X chromosome are genetic mosaics. - Phenotype depends on which X chromosome inactivated 60 61 Chromosome Theory Exceptions • Mitochondria and chloroplasts contain genes. - Traits controlled by these genes do not follow the chromosomal theory of inheritance - Genes from mitochondria and chloroplasts are often passed to the offspring by only one parent 62 Chromosome Theory Exceptions • Maternal inheritance: uniparental (oneparent) inheritance from the mother - The mitochondria in a zygote are from the egg cell; no mitochondria come from the sperm during fertilization - In plants, the chloroplasts are often inherited from the mother, although this is species dependent 63 Genetic Mapping • The science of determining the location of a gene on a chromosome - Early geneticists realized that they could obtain information about the distance between genes on a chromosome. • This is genetic mapping • Mapping is based on genetic recombination (crossing over) between genes. 64 65 66 Genetic Mapping • To determine the distance between genes: - dihybrid organisms are testcrossed - offspring resembling the dihybrid parent result from homologues that were not involved in the crossover - offspring resulting from a crossover are called recombinant progeny 67 Genetic Mapping The distance between genes is proportional to the frequency of recombination events. recombination frequency recombinant progeny = total progeny 1% recombination = 1 map unit (m.u.) 1 map unit = 1 centimorgan (cM) 68 69 70 71 Genetic Mapping • Determining the order of genes can be done with a three-point testcross • The frequency of double crossovers is the product of the probabilities of each individual crossover • Therefore, the classes of offspring with the lowest numbers represent the double crossovers and allow the gene order to be determined 72 73 74 Human Genetic Disorders • Some human genetic disorders are caused by altered proteins: - the altered protein is encoded by a mutated DNA sequence - the altered protein does not function correctly, causing a change to the phenotype - the protein can be altered at only a single amino acid (e.g. sickle cell anemia) 75 76 77 Fig. 13.11 Human Genetic Disorders • Some genetic disorders are caused by a change in the number of chromosomes. - Nondisjunction during meiosis can create gametes having one too many or one too few chromosomes - Fertilization of these gametes creates trisomic or monosomic individuals - Down syndrome is trisomy of chromosome 21 79 80 Human Genetic Disorders • Nondisjunction of sex chromosomes can result in: - XXX triple-X females - XXY males (Klinefelter syndrome) - XO females (Turner syndrome) - OY nonviable zygotes - XYY males (Jacob syndrome) 81 Sex Determination in Humans • The sex chromosomes, X and Y, are a homologous pair: – this pair is unique because X and Y carry different sets of genes – the Y chromosome has genes that determine maleness – the X chromosome has a variety of genes on it • XX = female; XY = male • X_ = female; _Y = does not survive 82 Sex Determination in Humans • Genotype: X__ • Sex: Female • Phenotype: Turner’s Syndrome – short stature (less than 5’) – ‘webbed’ neck and other physical characteristics – infertility 83 Sex Determination in Humans • Genotype: XXX • Sex: Female • Phenotype: ‘Super-females’, metafemales – tall stature – longer legs and torso – may have learning disabilities or emotionally underdeveloped – commonly labeled as ‘trouble makers’ in school 84 Sex Determination in Humans • Genotype: XYY • Sex: Male • Phenotype: ‘Super-males’ – produce higher levels of testosterone – may be taller than average – no known significant abnormalities 85 Sex Determination in Humans • Genotype: XXY or XXXY • Sex: Male • Phenotype: Klinefelter Syndrome – produce very little testosterone – taller and more overweight than average – may have feminine characteristics – sterile or nearly sterile – most have normal cognitive abilities – can be treated with testosterone early in life 86 Table 13.2-1 Table 13.2-2 89 Human Genetic Disorders • Genomic imprinting occurs when the phenotype exhibited by a particular allele depends on which parent contributed the allele to the offspring • A specific partial deletion of chromosome 15 results in: - Prader-Willi syndrome if the chromosome is from the father - Angelman syndrome if it’s from the mother 90 Human Genetic Disorders • Genetic counseling can use pedigree analysis to determine the probability of genetic disorders in the offspring. • Some genetic disorders can be diagnosed during pregnancy: - amniocentesis collects fetal cells from the amniotic fluid for examination - chorionic villi sampling collects cells from the placenta for examination 91 92 93