Chapter 27. Biomolecules: Lipids

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Chapter 27.

Biomolecules: Lipids

Based on McMurry’s Organic Chemistry, 6th edition

©2003 Ronald Kluger

Department of Chemistry

University of Toronto

About Lipids

 Naturally materials that preferentially extract into nonpolar organic solvents

Includes fats, oils, waxes, some vitamins and hormones, some components of membrane

General types: esters (“saponifiable”) and those that can’t be hydrolyzed

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

2

27.1 Waxes, Fats, and Oils

Waxes - contain esters formed from long-chain (C16-

C36) carboxylic acids and long-chain alcohols (C24-

C36)

Triacontyl hexadecanoate is in beeswax

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

3

Fats and Oils

 Animal fats and vegetable are triacylglycerols oil

 Triesters of glycerol with three long-chain carboxylic acids

 Saponification of a fat or oil with (reaction with aqueous NaOH) yields glycerol and three fatty acids

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

4

Fatty Acids (from Fats and Oils)

Straight-chain (C

12

- C

20

) carboxylic acids

Double bonds are cis-substituted but trans-fatty acid also occur

A fat or oil in nature occurs as a mixture of many different triacylglycerols

The most abundant saturated fatty acids are palmitic

(C

16

) and stearic (C

18

)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

5

Unsaturated and Polyunsaturated Fatty

Acids

 Oleic (C

18 with one C=C) and linolenic (C

C=C) are the most abundant unsaturated

18 with 3

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

6

27.2 Soap

 A mixture of sodium or potassium salts of long-chain fatty acids produced by alkaline hydrolysis

(saponification) of animal fat with alkali

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Cleansing Action of Soap

The carboxylate end of the long-chain molecule is ionic and therefore is preferentially dissolved in water

The hydrocarbon tail is nonpolar and dissolves in grease and oil

Soaps enable grease to be dissolved into water

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

8

Detergents

“Hard” water contains Mg +2 and Ca +2 that form insoluble salts with soaps

Synthetic detergents are alkylbenzene sulfonates that dissolve dirt like soaps but do not form scums with

Mg +2 and Ca +2 .

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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27.3 Phospholipids

Phospholipids are diesters of H

3

PO

4

, phosphoric acid

Phosphoric acid can form monoesters, diesters and triesters

In general these are known as “phosphates”

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

10

Phosphoglycerides

Contain a glycerol backbone linked by ester bonds to two fatty acids and phosphoric acid

Fatty acid residues with C

12

–C

20

The phosphate group at C3 has an ester link to an amino alcohol

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

11

Phosphoglyceride Membranes

Phosphoglycerides comprise the major lipid component of cell membranes

Nonpolar tails aggregate in the center of a bilayer

Ionic head is exposed to solvent

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

12

Sphingolipids

The other major group of phospholipids

Sphingosine or a dihydroxyamine backbone

Constituents of plant and animal cell membranes

Abundant in brain and nerve tissue, as coating around nerve fibers.

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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27.4 Prostaglandins

C20 lipids that contain a five-membered ring with two long side chains

Present in small amounts in all body tissues and fluids

Many physiological effects

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Prostaglandin Sources

 Biosynthesized from arachidonic acid (C20 unsaturated fatty acid)

 Catalyzed by cyclooxygenase (COX)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

15

27.5 Terpenoids

Steam distillation of plant extracts produces

“essential oils”

Chemically related to compounds in turpentine (from pine sap) called terpenes and thus called terpenoids

Mostly hydrocarbons (some oxygens) that do not contain esters (stable to hydrolysis)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Terpenoids Are Isoprenoids

Terpenoid structures are derived from isoprene (2methyl-1,3-butadiene) units connected head-to-tail

(Isoprene Rule)

The term “head-to-tail” means that dissimilar ends are connected (you can choose which is a “head” and which is a “tail”)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Classification of Terpenoids

Classified according to the number of di-isoprenoid

(C

10

) units they contain

Monoterpenes have 10-carbons, sesquiterpenes

(sesqui = 1 1/2) have 15-carbons from three isoprene units, and so on

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Some Important Terpenoids

The triterpene lanosterol is the precursor of steroid hormones

The tetraterpene b

-carotene is a source of vitamin A

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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27.6 Biosynthesis of Terpenoids

Isopentenyl pyrophosphate (IPP) forms higher isoprenoids in reactions catalyzed by prenyl transferase

Monoterpenoids, diterpenoids, and tetraterpoids arise from 1-deoxyxylulose 5-phosphate.

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Mevalonate Pathway to

Isopentenyl Diphosphate

 Begins with the conversion of acetate to acetyl CoA followed by Claisen condensation to yield acetoacetyl

CoA

 Catalyzed by acetoacetyl-CoA acetyltransferase

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

21

Aldol Condensation Produces

HMG-CoA

Carbonyl condensation reaction of acetoacetyl CoA with acetyl

CoA

Produces 3-hydroxy-3-methylglutaryl CoA (HMG-CoA)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Reduction Forms Mevalonate

HMG CoA is reduced to mevalonate

Catalyzed by HMG CoA reductase utilizing NADPH

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Conversion of Mevalonate to IPP

Pyrophosphorylation gives mevalonyl-PP

Addition of phosphate from ATP followed by loss of

CO

2 and phosphate

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Conversion of Isopentenyl

Diphosphate to Terpenoids

 For triterpenes and larger, head-to-head coupling of farnesyl diphosphates gives squalene

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Mechanism of Isomerization

 Isomerization of IPP to DMAPP is catalyzed by IPP isomerase through a carbocation pathway

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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Coupling Mechanism

 Nucleophilic substitution reaction in which the double bond of IPP behaves as a nucleophile in displacing diphosphate ion leaving group (PPO

)

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

27

Conversions of Monoterpenoids

 Typically involves carbocation intermediates and multistep reaction pathways catalyzed by a terpene cyclase

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

28

27.7 Steroids

Steroids,are another class of nonsaponifiable lipid, defined by structure

Has four fused rings A, B, C, and D, beginning at the lower left

Carbon atoms are numbered beginning in the A ring

The six-membered rings are in fixed chair conformations

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

29

Functions of Steroids

 In humans as hormones, steroids are chemical messengers secreted by glands and carried through the bloodstream to target tissues

 Also widely distributed as cholesterol

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

30

Male Sex Hormones

 Testosterone and androsterone are the two most important male sex hormones, or androgens

 Androstanedione is a precursor

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

31

Female Sex Hormones

Estrone and estradiol are the two most important female sex hormones, or estrogens

Progesterone is the most important progestin, steroids that function in pregnancy

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

32

Adrenocortical Hormones

Adrenocortical steroids: secreted by the adrenal glands near the upper end of each kidney

Mineralocorticoids: control tissue swelling by regulating cellular salt balance

Glucocorticoids: regulation of glucose metabolism and in the control of inflammation

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

33

Synthetic Steroids

Made in pharmaceutical laboratories as new drugs

Includes oral contraceptives and anabolic agents

Methandrostenolone is an anabolic steroid used for tissue-building

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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27.8 Stereochemistry of Steroids

Two cyclohexane rings can be joined in either a cis or a trans manner

In cis-decalin, both groups at the ring-junction positions are on the same side of the two rings

In trans-decalin, the groups at the ring junctions are on opposite sides

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

35

A/B Junction in Steroids

Steroids can have either a cis or a trans fusion of the

A and B ring

(B –C and C–D) are usually trans

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

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27.9 Steroid Biosynthesis

 Enzyme-catalyzed addition of oxygen atom to squalene

 Stereospecific formation of an oxirane from an alkene

R

Squalene

R

O

2

Enzyme

O

2,3-Oxidosqualene

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003

37

Cyclization to Steroid

Stork-Eschenmoser mechanism

Enzyme-catalyzed

See Figure 27.6

R

R

E-H

O

HO

Based on McMurry, Organic Chemistry, Chapter

27, 6th edition, (c) 2003 protosteryl cation

38

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