Development of a Bioreactor to Simulate Drug Adsorption from the Small Intestines into the Blood stream BSE-4126 Comprehensive Design Project Drafted May 4, 2009 Purpose: The purpose of this report, at its fundamental level, is to explain the problem and our approach to its solution. This will be accomplished by clearly defining: the problem, the scope of work, the necessary background information, the design and its alternatives, the work plan, and safety measures. The criteria and constraints of the project will be described as well as evaluated in this document. Team Name: Hungry Hippos Engineering Group Members: David Morgan Kevin Richter *Neil Templeton* Advisors: Dr. Mike Zhang Dr. Robert Grisso EXECUTIVE SUMMARY: Development of a Bioreactor to Simulate Drug Adsorption from the Small Intestines into the Blood stream When a new drug is released on the market, in general, it is 10 to 15 years in the making. Occasionally, it takes all of 10 years to learn that the drug being developed, does not meet regulation. This represents a monumental risk that all pharmaceutical companies take on, and underscores high prescription drug costs for Americans. It was determined is estimated that 30-50% of the total developmental cost for a given drug is paid in clinical trials. All Drug testing on humans represents a significant undertaking on the company’s part, and a great deal of its budget is tied up in insurance. To quantify this in monetary value, 50 to 300 million US dollars are spent on clinical trials, for any given drug. Drug kinetics modeling is not a new concept, and on a basic level this task has been performed by the pharmaceutical industry for many years. What has not been performed is the advancement of this modeling, especially in a non invasive in vitro environment. A two compartment model (standard of industry) to explain drug adsorption with a central excreting and a peripheral compartment tells very little about the bioavailability of a drug. Bioavailability is analogous to Gibbs free energy, except in this case, the question is what portion of the drug is available to actually do work. When a drug is taken orally into the body, a great deal of the drug is never adsorbed past the small intestine’s folds. Of the drug that makes it to the blood stream, only a portion of the drug will ever make it be transported to the intentional site. This explains the concept of bioavailability, which in a sense is the fundamental concern of any type of drug introduced into the body. It tells you when the drug will be available to produce the desired effect. The multi-stage bioreactor developed by Hungry Hippos Engineering will give pharmaceutical companies this information at lower costs and in less time. Hungry Hippos has addressed the pharmaceutical industry’s critical challenge in research and development: cost. Enzyme inhibitor drugs make up nearly half (47%) of drugs currently marketed today, making it the most common type of drug. Therefore, it seemed appropriate to develop a design that could model this type of drug. This design can effectively explain the motion of oral drugs through the stomach, small intestines, and into the blood stream. It can show the impact of food inhibiting the absorption of the drug through the small intestines, as well as how the stomach’s pH can alter a drug and its associated encapsulation. Not only can the design predict the mass balance of a given drug, but the overall rates of reaction in various stages. Modeling after a drug well studied and still widely used, Captopril, Hungry Hippos can reproduce the invivo performance of the drug in our specific reactor design. With this solution, predictions can be made on many types of upcoming enzyme inhibiting drugs in the pharmaceutical industry. Tests can be performed on our bioreactor design in a controlled environment, with no risk to human patients. This will accomplish the overall goal of this project, an increase in patient safety. This design can decrease the risk for allergic reaction or overdosing, because scientists will better understand drug absorption at various stages as well as the reaction kinetics representative of the human body. This technology truly is 2 advantageous to pharmaceutical companies, as less clinical trials correspond with decreasing insurance costs. Conversely, this gain can be returned to the consumer and prescription drug costs will decrease. Details of design, cost and issues 3 PROBLEM STATEMENT .......................................................................................................................7 BACKGROUND SITUATION ..................................................................................................................7 CONNECTION TO CONTEMPORARY ISSUES .........................................................................................7 SCOPE OF WORK ................................................................................................................................8 JUSTIFICATION FOR RESEARCH ...................................................................................................................8 OBJECTIVES ..........................................................................................................................................8 DELIVERABLES .......................................................................................................................................9 DESIGN CRITERIA AND CONSTRAINTS .................................................................................................9 LITERATURE REVIEW ........................................................................................................................ 10 GENERAL INFORMATION ........................................................................................................................ 10 DRUG ADSORPTION .............................................................................................................................. 11 PHARMACOKINETICS ............................................................................................................................. 12 CAPTOPRIL KINETICS ............................................................................................................................. 14 ORAL DRUG INFORMATION .................................................................................................................... 16 CAPTOPRIL INFORMATION ...................................................................................................................... 17 STOMACH AND SMALL INTESTINES ANATOMY ............................................................................................. 18 GENERAL........................................................................................................................................................ 18 STOMACH ...................................................................................................................................................... 19 SMALL INTESTINE............................................................................................................................................. 20 MICROORGANISMS .......................................................................................................................................... 20 OTHER CONSIDERATIONS .................................................................................................................................. 21 SAFETY AND REGULATIONS ..................................................................................................................... 21 FEDERAL REGULATIONS .................................................................................................................................... 21 ANIMAL TESTING ............................................................................................................................................. 22 GLOBAL ENVIRONMENT ................................................................................................................... 22 SAFETY ASSESSMENT ....................................................................................................................... 22 ENVIRONMENTAL CONSIDERATIONS ................................................................................................ 23 4 ALTERNATE DESIGNS ........................................................................................................................ 24 STOMACH/ENZYMATIC SI MODELS .......................................................................................................... 25 OTHER CONSIDERATIONS ....................................................................................................................... 26 PROJECT DESIGN .............................................................................................................................. 26 DESIGN 1. .......................................................................................................................................... 26 DESIGN 2 ........................................................................................................................................... 27 DESIGN 3 ........................................................................................................................................... 29 MASS BALANCES.................................................................................................................................. 30 PROJECT EVALUATION ..................................................................................................................... 32 DESIGN SCHEDULE ........................................................................................................................... 33 TIMELINE ........................................................................................................................................... 33 START AND FINISH DATES....................................................................................................................... 36 NON-ROUTINE AND ROUTINE TASKS ......................................................................................................... 36 RESOURCE CONSTRAINTS ....................................................................................................................... 37 ACCOMPLISHMENTS AND FUTURE CONSIDERATIONS ..................................................................................... 37 CONCLUSION ................................................................................................................................... 39 REFLECTIONS ................................................................................................................................... 40 APPENDIX A ..................................................................................................................................... 42 LIST OF FIGURES................................................................................................................................... 42 FIGURE 1. DIFFUSION SIMULATION. ................................................................................................................... 42 FIGURE 2. DRUG KINETICS MODEL. .................................................................................................................... 43 FIGURE 3. TWO COMPARTMENT MODEL OF DRUG KINETICS. .................................................................................. 43 FIGURE 4. GASTROINTESTINAL TRACT (MARIANA RUIZ VILLARREAL, 2006). ............................................................. 44 FIGURE 5.ANATOMY OF THE STOMACH. .............................................................................................................. 45 FIGURE 6. DUODENUM OF THE SMALL INTESTINES. ............................................................................................... 46 FIGURE 7. HIGH PRESSUREFILTRATION. ............................................................................................................... 46 FIGURE 8. HOLLOW FIBER MEMBRANE. .............................................................................................................. 47 FIGURE 9. DOUBLE ENZYME REACTOR. ............................................................................................................... 47 5 FIGURE 10. SINGLE ENZYME REACTOR ................................................................................................................ 47 FIGURE 11. SIMPLIFIED BIOREACTOR DESIGN. ...................................................................................................... 48 FIGURE 12. FALL SEMESTER GANTT CHART. ......................................................................................................... 49 FIGURE 13. SPRING SEMESTER GANTT CHART. ..................................................................................................... 50 FIGURE 14. DECISION FLOWCHART..................................................................................................................... 51 FIGURE 15. BREAKDOWN OF CURRENTLY MARKETED DRUGS IN THE UNITED STATES TODAY (COPELAND, 2005)............. 52 FIGURE 16. DESIGN 1. BLOOD STREAM INHIBITION REACTOR. ............................................................................... 53 FIGURE 17. DESIGN 2. PRO-DRUG NON IMMOBILIZED REACTOR............................................................................. 54 FIGURE 19. COMPETITIVE ENZYME INHIBITION. .................................................................................................... 55 FIGURE 20. ENZYME KINETICS OF CAPTOPRIL. ...................................................................................................... 56 FIGURE 21. MASS BALANCE. ............................................................................................................................ 56 LIST OF TABLES .................................................................................................................................... 57 TABLE 1. DESIGN OF ADSORPTION MODELS. ........................................................................................................ 57 TABLE 2.DECISION MATRIX ON ALTERNATE DESIGNS. ............................................................................................. 57 TABLE 3. DESIGN OF ENZYMATIC SYSTEMS FOR STOMACH AND SMALL INTESTINE. ...................................................... 58 TABLE 4. ECONOMIC ANALYSIS. ......................................................................................................................... 59 QUALIFICATIONS .................................................................................................................................. 60 SAMPLE CALCULATIONS ......................................................................................................................... 61 ACID-BASE CALCULATIONS USING HENDERSON-HASSELBALCH EQUATION................................................................. 61 WORKS CITED ..................................................................................................................................... 63 6 TITLE: DEVELOPMENT OF A BIOREACTOR TO SIMULATE DRUG ADSORPTION FROM THE SMALL INTESTINES INTO THE BLOOD STREAM PROBLEM STATEMENT {NOT SURE YOU HAVE DEFINED THE PROBLEM} To improve patient safety in oral pharmaceuticals, the design of a multi-stage bioreactor will be developed. {HOW?} The design will have a simulated stomach, small intestines, and blood stream component where drug adsorption will take place. This system will improve understanding of drug delivery considering aspects such as adsorption, enzyme inhibition, and reaction kinetics. BACKGROUND SITUATION Medicine has provided a source of healing and comfort to people throughout time. With each new drug released, there is rigorous clinical testing to determine the drug’s clinical uses as well as side effects. In any clinical trials there are potential dangerous side effects and risks are posed to the volunteer patient or the animal subjects. To limit the risks to patients, a bioreactor simulating the changes in the stomach and the absorption/adsorption in the intestines should be developed. Beyond just the prevention of these dangerous practices, the pharmaceutical industry could benefit by rapidly increasing experimentation of new drug possibilities, or document the effects of different drug combinations and observe the absorption of the intestines in a non-harmful or intrusive way. This design could serve as a predictor for all new drugs coming up the pipeline without any human testing. The successful design would represent a significant cost savings for the company through a reduction in insurance cost. The bioreactor representation of the stomach, small intestines, and absorption into the blood stream would make this possible. CONNECTION TO CONTEMPORARY ISSUES Currently in our society, our bioreactor design will deal with issues such as: human and animal testing, PETA, drug manufacturing and experimentation, and medical advances. Currently the 7 cost of prescription drugs is extremely high and sometimes unaffordable for the middle class, so a successful bioreactor design could potentially reduce the cost to consumer. With the baby boomer generation reaching retirement age, the prescription drug cost problem is only going to affect more and more Americans. Not to mention the supply and demand problem that will occur when more Americans retire than any other prior generation. This design could potentially improve the public representation of a drug company. When money is invested in this, it could be portrayed as a commitment to the safety of the consumer. When drug companies have to deal with the problem of removing drugs off the market (when determined unsafe when reevaluated by the FDA) our design could provide a welcome change of pace. Perception of a company’s commitment to safety could lead to great market share and greater profit margins. SCOPE OF WORK Justification for Research Currently, clinical trials represent between 30 and 50% of the total development costs of any particular drug. Clinical trials are the stage where human testing actually takes place (as well as rat testing), and is towards the end of the drug development. This represents a monetary value of 50 to 300 million dollars, widely varying according to the type of drug. For this reason, our bioreactor design could potentially significantly reduce this initial and significant cost to the drug manufacturer and move the product into the market more quickly. The design would do so by offering more information to the pharmaceutical company, regarding drug delivery, before clinical trials ever began. Essentially the same information acquired through blood samples (from a volunteer patient) could potentially be given by the various stages of our bioreactor design. Less human testing leads to less insurance cost paid by the drug manufacturer, needed to protect them in the event of a catastrophe of in human testing (Hughes and Turner, 2002). Objectives 8 1. Increase patient-based drug testing safety This is an indirect objective 2. Better understand drug delivery (Measureable?) 3. Design and model intestine/bloodstream bioreactor Deliverables 1. Specific Bioreactor Design 2. Mass Balance 3. Economic Plan The deliverables were chosen based on what information a company may need to invest in the artificial stomach and small intestine. An investor would need to know that the design is feasible, that it has correct assumptions during the design, the measures of success, and most importantly how much the product will cost. DESIGN CRITERIA AND CONSTRAINTS The determination of whether or not the chosen design (all designs mentioned in alternative designs section) is successful is dependent on a number of criteria. With the cost of clinical trials making up 30-50% of the overall cost for a drug’s development, it won’t be particularly challenging to offer a cheaper alternative. Currently drug companies pay from 50-300 million dollars in their clinical trials, and though it’s a high cost, it is a necessary cost to ensure safety and meet the regulations from the FDA. This project is also unique in that it aims to increase safety in drug testing, specifically for the patients volunteering. The question can reasonably be raised in what price you are willing to pay for safety? This point is raised not to start an ethical discussion, but to draw attention to the point that we aren’t developing a product to compete in the marketplace. Currently the idea of a bioreactor, of any shape or form, is at best in the research and development stage in the United States. To this team’s knowledge, no bioreactors are in use today by pharmaceutical companies for the purpose of modeling the GI tract. Competition would cloud the overall justifiable cost argument, but it is relatively unclear just who the competition is at this point. 9 Physically {what happen to size?}, the specific design of the bioreactor will be constrained to match to human body as closely as possible. Therefore it will need to be 37 degrees Celsius, which can be controlled by insulation and heat application. It will need to be able to withstand the strong acidic environment of the stomach. It will also need to be partitioned to be the same size as the stomach and small intestine. The reactions that occur in the stomach will need to be emulated in the stomach section and the enzymatic changes will need to be accounted for in the small intestine section. The adsorption will also need to occur at similar rates as the human small intestine. LITERATURE REVIEW General Information In research and development, companies of any discipline are always working to improve their technology. Technology developed to increase safety is unique; one of the few cases where improving efficiency is second hand (to overall safety). In this design, safety and efficiency go together. Effectively simulating the pharmacokinetics without having to risk a patient’s life, is a huge advance in efficiency. Insurance and legal costs are significantly decreased now that a machine is taking the risk that a human once volunteered to do. To improve safety of drugs, as well as decrease patient based testing, our design aims to provide a simulation that has yet to be well established in the industry. This design is unique in that most of the research being done in order to simulate drug delivery actually uses living tissues or organs. For example, Fortn et al. (2001) has successfully replicate artificial perforations by means of a bioreactor to create gastric mucosa and fibrous tissue. This design uses a bioreactor to do the simulation. The bioreactor developed will simulate the stomach and small intestines, as well as the blood stream. One possible way to simulate the diffusion of a molecule into the small intestine (Figure 1), is to use a filter design (Stefanyk, 2008). Even though the small intestines and stomach represent a large portion of the digestive system, important components are being left out. Digestion begins in the mouth. Weisbrod insists that the mouth should be included for simulation of the digestive tract. There are even 10 ways to have drugs pass through the stomach unscathed (Weisbrod, 2008), which raises the consideration of replacing the stomach with the mouth. Drug Adsorption In terms of drug safety, frequently lab tests are done on a small scale to simulate different parts of pharmacokinetics (literally the movement of drugs). Passive diffusion is predominant for most forms of drugs. In addition, all forms of drugs must pass through several forms of biological membranes which are composed of mainly lipids and proteins. Traditionally, the ability of the drug to permeate across various biological membranes is evaluated by measuring the partitioning of the drug in octanol and water systems. Octanol is a good representation of lipid materials. Partitioning is simply the ability of a compound to distribute in two immiscible systems. Partitioning is often a function of pH, among other things such as temperature. This current work of partitioning using octanol as the medium will be heavily considered in development in the bioreactor (Ghosh et al., 2005). Typically, poor oral drug absorption has been attributed to having poor solubility or poor membrane permeability (at a given pH). Also, physiology as well as chemistry are the two predominant factors looked at for drug absorption. However, a new approach to understanding drug absorption deals with the actual drug’s metabolism in the intestine. The consideration of a counter-transport process via enzyme is also being considered. Both of these drug interactions are believed to have a significant impact on the drug’s absorption. The availability of a large number of drugs is believed to be impacted by these two processes (Benet et al., 1996). Passive diffusion occurs when there is a concentration gradient in the system. It is the natural tendency towards equilibrium. Depending upon the concentration gradient, this passive diffusion might occur in a quick or sluggish fashion at any given time. In the human body, often the concentration gradient is quite minimal, so this passive diffusion might not occur fast enough to actually make a positive impact on the body. Since the human body is incredibly efficient, often the use of attractive or repulsive forces (often hydrophobic or hydrophilic) are 11 used to speed the diffusion of a molecule through a biological membrane. These are all forms of passive transport. When passive diffusion cannot provide the necessary rate for molecular movement, there are several forms of active transport that the body is known to use. In one specific form of active transport, mentioned by Benet et al. (1996), deals with the counter-transport processes using enzymes. In all cases, it is worthwhile mentioning that the enzyme doesn’t directly cause any reaction to take place; it merely plays a role as a catalyst. The human body would not be able to function without enzymes as catalysts, and when an enzyme is used, an “active” process is occurring. Pharmacokinetics Drug kinetics, meaning literally the movement of drugs throughout the body, is one of the key points that this design project will address. Tracing the path of the drug can be difficult, and in many instances the entire system will be simplified as the stomach, small intestine, and bloodstream (Figure 2) in order to develop mathematical models for it. Two of the most used models are the one and two compartment system. In the one compartment model, the assumption is made that the drug reaches rapid equilibrium throughout the body. A good example of a rapid equilibrium type of drug is Viagra (Stewart et al., 2009). Peak drug concentrations of Viagra in the bloodstream can be found in as little as 30 minutes. The only factors that are considered are the drug dose going into the body, the volume of the body for the drug to rapidly disperse to, and the elimination rate of the drug. This model works best to simulate an injection of a drug, as the circulatory system can rapidly distribute the drug throughout the body. Typically the assumption is also made that the removal of the drug is directly related to current concentration. This also means that the half-life of the drug is always going to be the same, no matter what the concentration. Half-life is defined as the amount of time necessary for the drug to reach half its original concentration in the body. It is an important parameter of drug models, as it is assumed to be constant throughout the time the drug is taken to complete removal of the drug (through excretion). The major factor that controls the accuracy of this 12 model is how quickly the drug reaches equilibrium throughout the body. If equilibrium is nearly instantaneous, then this serves as an accurate model for the drug’s metabolism. The other model that it is actively used is the two compartment model (Gibson, 1994). The two compartment model (Figure 3) takes into account the fact that not every part of the body has the potential to eliminate a drug. Drug elimination is often studied in drug models because adsorption is often more difficult to measure. If the drug is not being eliminated, then it is most likely interacting with some components of the body. If not part of the GI tract, then the drug has obviously been absorbed through a biological membrane. Most of adsorption takes place in the small intestines, and minimal adsorption takes place in the stomach and mouth. Modeling adsorption in this design project will strictly deal with the small intestines. In conclusion, when testing humans measuring the removal of the drug is simpler; there is no invasive testing needed and no guesswork of where the drug might be concentrated in the body. Invasive testing is done, but it is much more time and effort intensive. A bioreactor design is being developed to reduce the amount of invasive testing. The major forms of drug removal are no different than any food, excretion via feces or urine. For this reason, a compartment is taken into account for all areas of the body that cannot eliminate the drug. This model is much more appropriate for simulations with the small intestines and stomach, as neither can directly eliminate a drug out of the body. In this model, more factors can be taken into account. The factors considered are: drug dose, rate of drug delivery to non-excreting compartment, rate of drug delivery to the excreting compartment, and the rate of drug removal. Areas of the body that are highly permeable, such as your lungs, heart, or glands are represented by the excreting compartment. Areas of the body that are not very permeable, such as your muscles or skin, are generally represented by the non-excreting compartment. In the two compartment model, in addition to modeling the change of concentration over time (like the one compartment model), the area under the concentration time curve must be taken into account. This area describes the overall load of the drug in the body. This “bioavailability” is an indirect representation of the therapeutic value of the drug (Gibson, 1994). 13 Kinetic order of a reaction must also be considered. When the assumption is made that the rate of drug removal is relevant to the concentration, a first order rate of reaction is assumed. The two compartment model, widely used in the pharmaceutical industry to explain drug kinetics, uses a first order rate of reaction. However, when the drug concentration is high enough, the body will remove of it at a maximum rate until a point, at which it will remove of the drug in accordance to concentration. When it is removing the drug at maximal rate, the relationship is zero order (Gibson 1994). Zero order reactions typically turn into a first order reaction as the concentration gradient decreases over time. The two largest groups of enzyme interactive drugs are pro-drugs and enzyme-inhibition drugs. Nearly half of all currently marketed drugs are enzyme inhibitors (Copeland 2005). A pro-drug bonds to an enzyme that speeds the reaction necessary for the substrate to change to a usable drug molecule (it changes form). An enzyme inhibitor doesn’t typically change in substrate form; it simply slows down a reaction that was already going to occur in the human body. Currently there is more research on enzyme inhibiting drugs as opposed to pro-drugs, as well as more drugs on the market. Enzyme inhibiting drugs will be used in this design because of greater available information and because of they will be more readily measureable in the outflow from the bioreactor. The inhibitor is a known substrate, and since it doesn’t change (in detectable form) using chromatography techniques, we will know what to measure for in the outlet of the reactor. Given enough time all of the inhibitors will elute out of the small intestine design. But with the immobilized enzymes in the column, they should elute out in a measureable quantity and a respective disassociation constant should be able to be calculated. To determine the contents of the outflow, samples will be taken at specific time intervals to determine how much enzyme interaction is taking place in the small intestines. The time intervals will have to be chosen at a later date. Depending on the drug chosen, a specific naturally produced target enzyme will be immobilized in the column. Captopril Kinetics 14 Peak reduction of blood pressure occurs roughly 60 to 90 minutes after initial dosage of drug (Stewart et al, 2009). It has been determined that to reduce the reaction velocity by half, a concentration of 4.98 x 10-10 M is necessary (Copeland, 2005) in the bloodstream. Specifically, the reaction that is being slowed by Captopril is the combination of angiotensin I with ACE to produce angiotensin II. This can be seen in Figure 18. angiotensin I is the substrate and ACE is the enzyme. The inhibitor, is our drug, Captopril. The half life of the drug is 30 minutes upon entering the blood stream, so the body is quite capable of readily removing it (Stewart et al, 2009). Due to the fact that analytical chromatography is a slow process in general, this design will not seek to remove of 50% of the drug in 30 minutes of time. The rate constant for the forward reaction of the enzyme combining with the substrate is 1.2 x 106 M-1s-1. This is commonly referred to as k1. The rate constant for the forward reaction of the enzyme combining with the substrate is 2.55 x 106 M-1s-1. This explains to you that at initial conditions, if the concentration of the substrate is the same as the concentration of the inhibitor, the enzyme will not only have a greater affinity to the inhibitor but additionally the reaction will proceed at less than half the possible velocity. Additionally, it can be observed that the overall rate of the reaction is certainly forward by looking at the rate coefficients. Whether the inhibitor is added or not the reaction, it will proceed. The rate that the reaction precedes is what is impacted by the inhibitor, and drug, Captopril. The forward rate coefficient of the enzyme combining with the substrate is, as previously mentioned, 1.2 x 10 6 M-1s-1. With the reverse of that being only 4 x 10-4 s-1, the forward reaction is 3 x 109 more powerful at initial conditions (Copeland, 2005)! The body cannot have this reaction proceeding so quickly at all given times (reaction would be out of control) so the body uses allosteric effects regulate or moderate the reaction (Campbell et al, 2006). The substrate and product of our design’s reaction, as mentioned previously, are Angiotensin I and Angiotensin II. However, there are several other intermediates that additionally are made to regulate the blood pressure. The eventual product that impacts blood pressure is aldosterone. However, angiotensin I and angiotensin II impact blood pressure as well, as they effect the production of aldosterone. Captopril doesn’t inhibit the production of 15 aldosterone, but instead angiotensin II. For this reason, or design simplifies the system and only deals with the angiotensin I to angiotensin II conversion. The significance of all this is that the catalytic rate coefficient, kcat, is dynamic. Kcat describes the rate that the enzyme substrate complex converts to the product and enzyme. The enzyme responds to the product concentration (aldosterone) and the product works as a negative effector. A diagram of the enzyme kinetics can be seen in figure 19. Oral Drug Information Orally taken drugs are the direct focus of this bioreactor simulation. Protein based drugs are not significant in this simulation as they have not yet been developed to be able to tolerate oral dosages. This is because they are particularly susceptible to degradation, especially if they were to be exposed to the pH of the stomach. Much of the drug technologies on the market today currently rely on a controlled release mechanism. There are a few different levels of controlled drug release, and in the spirit of the current jargon, there are six different generations of it. Generations one through three will be most heavily considered for development products to be potentially used in the bioreactor. In many drugs on the market today, the flatter the plasma drug concentration over a period of time, the better. Unlike modern day medicines that might be site specific, such as protein based drugs, none of these drugs are at that level of sophistication. Once the drug has entered the body orally, it will follow natural biological paths into the rest of body through the bloodstream as shown in Figure 2. Likewise, once drugs have entered the bioreactor that is under development, there will be no control over where the highest concentration of drug will specifically go. This is doubly frustrating as it is very difficult to measure the concentrations of any drug in different parts of the body after it has been ingested (Ghosh, 2005). Drug tablets can be made of surprisingly numerous materials, which could involve: polymers, sugars, and gelatins. Depending on the purpose of the drug, one of the many options can be chosen. Though the tablet coating process can be overall difficult to master (for a given drug), the benefits of solid tablets are substantial. They can be accurately measured for specific dosages, they are easily transported in bulk, and they are generally more stable than their 16 liquid cousins. Understanding the materials that coat a given drug will allow for the prediction of where the drug will become active, and how it will reach its given destination (Ghosh, 2005). Another form of oral drug dosage is a liquid. Solutions, suspensions, and emulsions are the main forms of orally taken liquid drugs. The predominant solvents that are added to the drugs are water and alcohol. There are many advantages and disadvantages of oral liquids. Some of the advantages are: the active agent is homogeneously distributed in the product and the agent doesn’t need to be dissolved and therefore can have faster therapeutic response. Some of the disadvantages are: the active agents are often susceptible to chemical degradation and the solution is often susceptible to microorganisms (Ghosh, 2005). Captopril Information Captopril was one of the first blood pressure regulator drugs to ever hit the market, and it was approved by the FDA in 1981. Early research actually extracted ideas for such a drug by studying the venom of snakes. As it turns out, snake venom often contains components that inhibit the conversion of Angiotensin I to II (Case et al, 1980). It is still widely used today for treatment, and as almost 74 million Americans have hypertension, will likely remain popular for years to come. It is an enzyme inhibitor, making it among the most common class of drugs being marketed today (Figure 14). It was chosen as the drug for this design to model because of the relative simplicity in comparison to other drugs. Pro-drugs, another common type of drug used for high blood pressure treatment, will change forms at various stages in the body until its eventual use. This makes pro-drugs an unattractive option for the design, because what is introduced in the system cannot directly be measured for. Since Captopril remains the same throughout introduction and excretion out of the body, it was chosen because it would be easier to measure for. Captopril works by inhibiting one specific enzyme, ACE, and nothing else. It inhibits one step of the multiple steps that take place in our body to regulate blood pressure. Some enzyme inhibitors show affinity to multiple enzymes, further complicating the system, making Captopril again a logical choice. In short, choosing Captopril allowed for a more feasible design that could produce more measureable and repeatable results. It was also chosen because of the 17 popularity of enzyme inhibiting drugs on the market today. The goal of this design project is to effectively simulate Captopril, but if this can be accomplished, the design can predict the kinetics of a drug before ever entering a volunteering test subject. The reason that Captopril works is because of the impact that Angiotensin I and II have on the body. Angiotensin II is a vasoconstrictor that is three times more powerful then Angiotensin I (Copeland, 2005). As will be explained later in the mass balance, the majority of the Captopril never accomplishes this goal of inhibiting the production of Angiotensin II, but as it turns out the drug doesn’t have to. The goal of Captopril is to reduce blood pressure, not cease it. If Captopril was 100% effective, this would be of no use to medicine as it would result in patient death. Captopril moderates the body’s natural regulatory mechanism called the reninangiotensin system. Rate coefficients of Captopril can be found in figure 19. Stomach and Small Intestines Anatomy GENERAL The digestive tract in the human body is composed of many different major parts including the mouth, stomach, small intestine, large intestine, pancreas, and liver (Figure 4). Even this is not the entire system, and for the purposes of this design there will be even more simplification. The stomach’s main purpose is the mechanical and chemical digestion of food. It does use pepsinogen to form pepsin to begin the chemical digestion of proteins, but the majority of the enzymatic digestion occurs in the small intestine. Besides the pepsin in the stomach and the amylase in the mouth, the section of the small intestine called the duodenum uses enzymes secreted locally and those transferred from the pancreas and liver to break down lipids, starch, sugars, and proteins. The enzyme secretion is controlled by a variety of hormones that can start and stop the secretion process. Bile salts from the liver are also used in to emulsify fats for easier decomposition. Beyond the duodenum the rest of the small intestine absorbs the nutrients like amino acids, maltose, and fatty acids. The large intestine is mainly used to reabsorb water and salts (Hopson, 1992). For the purpose of this design the stomach and the small intestine are the only major locations that will be focused on. 18 The movement through the tract called peristalsis is mainly controlled by muscle contraction. Two different sphincters exist on the stomach, one at the entrance and one at the exit. The cardiac sphincter at the opening is controlled by the swallowing motion from the esophagus as the food is moved into the stomach. There the food becomes chime and exits through the pyloric sphincter at an average rate of about 5 ml per sec in a squirting motion. This flow rate will be used in the reactor to be developed. This is controlled by muscle contraction, but unlike the cardiac sphincter is not done so consciously (Mader, 1994). In creating stomach/small intestine bioreactor, the mouth and large intestine may be ignored. While the secretions from the pancreas and liver can be simulated, the majority of the focus will be on the stomach and small intestine. With the way food flows through the stomach and small intestine, the best kind of reactor will be a batch reactor to better simulate the stomach. The path from the small intestine functions more like a continuous reactor, the batch process from the stomach will adequately simulate the process (Purves, 2004). STOMACH The lining of the stomach produces approximately 2 liters of gastric fluid daily, composed mainly of: pooled hydrochloric acid, mucus in the layers, and pepsinogen secreted into the system (Figure 5). The acidic nature of the stomach can change break down lipids by peroxidation (Kanner, 2001). Proteins are one of the products largely broken down in the stomach by pepsin created from the reaction of pepsinogen and HCl, though not absorbed. This is largely the reason why protein based drugs have yet to advance to the level of being administered orally. Enzyme sources, their location that they are active, and the products that they break down are well known and studied (Starr, 2004). For example Lactase has been widely studied in its relation to lactose intolerant people. Many people exhibit problems with milk’s sugar lactose. Lactase, produced in the cells of the small intestine, has been studied and shown to break down lactose to aid in digestion. While to people mentioned in National Digestive Diseases Information Clearinghouse have problems with lactase other people who have lactase working in their system have no trouble with milk. 19 SMALL INTESTINE The small intestine is made up of three specific parts, the duodenum, the jejune, and the ileum. Most of the reactions that occur in the small intestine occur in the duodenum. The pancreatic duct (Figure 6) leads into this section with enzymes from the pancreas and liver. Most of the adsorption that occurs in the small intestine occurs in the jejune and ileum. Some adsorption does occur in the duodenum though, and in total the surface area where adsorption can occur is about 550 square meters (Purves, 2004). Due to the fact that recreating 550 square meters in a design to fit in a lab space is nearly impossible, this design will not incorporate such a large surface area. The human body creates such a large surface area by having a great deal of overlapping folds. Having overlapping folds and a consistent experimental runs is highly unlikely and the technology simply does not exist. For this design, an area of 1 m2 square meter will represent the small intestines. Transmembrane pressure will be used to overcome the fact that the area for diffusion to take place is going to be considerably smaller. The surface area will be considered appropriate if expected diffusion rates are produced. MICROORGANISMS There are several microorganisms in the digestive system, yet only a few will be considered in this simulation. This is because some of the microorganisms in our body are responsible for producing enzymes that are needed for digestion. The only natural flora of the stomach is the microorganism Heliobacter Pylori that can set up the housekeeping in the stomach because of its strong flagella and urease enzyme which can split urea into ammonia and CO 2. The ammonia dampens the acidic environment making it feasible to live in the stomach. Also food can pass through the stomach due to a food bolus in certain cases (Daniel, 2008). It is nearly impossible for any other microorganism to survive in such harsh conditions of the stomach with the pH around 2. The small intestines have slightly more microorganisms in them. The pH changes to nearly 4 or 5. This allows the bacteria that are Enterococci and Lactobacilli to survive in the environment. As the small intestines continue more bacteria can survive (Brock, 2006). 20 OTHER CONSIDERATIONS A food’s effect upon an impact of a drug can be significant. However, they are difficult to model. Biological membrane pore size can be altered with red meats and it can allow for more toxins to be absorbed into the system. Gorelik et al. (2008) discourages us from following food digestion with the system. This could be a future change we could alter our model at a later time. Safety and Regulations Safety in pharmaceuticals fights impossible odds to get a medicine with no chance of any side effect. “Every effective medicine has a balance of benefit to risk and anybody taking or prescribing a medicine, to obtain the anticipated benefit, must recognize and accept the concomitant risk of an adverse effect” (Inman, 1986). FEDERAL REGULATIONS There are two organizations in the US who influence drug safety. The first organization is the food and drug administration (FDA) and the second organization is the drug regulatory authorities (DRAs). Ways these companies improve drug safety are by modifying the formulation of the drugs to decrease gut irritation, aid absorption, or alter the bioavailability in order to produce more consistent and more appropriate blood levels (Inman, 1986). The words ‘reformulations of drugs’ are strongly discouraged in drug safety improvement. The DRA would prefer a specific area to be mentioned for drug safety. Reformulation could cause a complete new set of side effects. The largest area that the DRA pays attention to is the Post Marketing Surveillance (PMS). This implies that the industries must follow any ideas that relate to safety as long as they are practical and realistic. Prescriptions drugs have strict regulations listed due to the potential to do harm if used incorrectly. The number one problem with prescription drugs is the prescription drugs are being diverted for illegal uses. The Drug Abuse Warning Network (DAWN) is in charge of making sure prescription drugs go to their proper use. It is nearly impossible to get addicts off of prescription drugs. Therefore there are regulations on dosage, labeling, and warnings. Any positive or negative effect known about the drug must be listed on the bottle. 21 ANIMAL TESTING Federal regulations have strict rules on animal testing. Animal testing costs amount to approximately $136 billion per year (Stare and George, 2008). In animal testing are there are 25-50 billion animals killed every year by drug testing. Most of these animals are rats and hamsters. Half of those tests are done by cosmetic companies. Even the tests that are successful have harmful effects for 61% of the people who are tested on. This is due to enzymatic differential in animals versus humans. For instance, cats do not have the enzyme to digest ibuprofen (Paws, 2008). GLOBAL ENVIRONMENT Regulations of medicines in Europe started shortly after the thalidomide affair. The thalidomide affair was a toxicological disaster caused by several ‘competent authorities’ which allowed the drug to make the market. The European Union was established to have a common market for drugs on the market. This organization is decades behind the FDA which was established in the US in the early 1900s but the EUs branch for drug safety still has very similar regulations (Mulder, 2006). SAFETY ASSESSMENT Good Laboratory Practice (GLP) was developed in the 1970s to ensure quality. All US and European countries should meet GLP standards. The only portion of pharmaceuticals that do not follow GLP standards would be the developmental pharmacological section. (Mulder, 2006) When assessing if the products would be safe for humans there are several different qualities that each product must pass. For instance if it was a Vaccine, it should have minimal side effects. Whole-cell pertussis vaccine was taken off of the market due to side effects including convulsions, persistent, and screaming. If the product was a sleeping pill it would have a strong effect on blood pressure. It could be pulled off the market if there was a high risk of patients developing a dependence on the drug by taking a sleeping pill or other drug every night (Mulder, 2006). If there was a harmful drug identified, patients must know what medicines they were taking. The best way to identify these drugs would be leaving them in their original packaging with 22 warning labels shown. If the drugs were not in the original packaging they would be considered dangerous because the consumer would not be informed of active ingredients. (Inman, 1986) The ICH, the International Conference on Harmonisation of Technical Requirements for Registration of Pharmaceuticals for Human Use, and The ICH M3 guidelines specify that before the first use in humans the following data should be present. Safety pharmacology with respect to vital functions, cardiovascular, central nervous system, and respiratory system. Information on absorption, distribution, metabolism, and animal metabolic pathways. Single-dose (acute) toxicity in two mammalian species. A dose-escalation study is considered an acceptable alternative. Repeated-dose toxicity. Tests should be done on rodents and in non-rodents. Local tolerance should be studied, preferably in connection with other toxicity studies. Genotoxicity data from in vitro tests: evaluations of mutations (bacterial mutagenicity, Ames test) and of chromosomal damage (e.g. mouse lymphoma) are generally needed. The FDA has developed the “ScreeningIND” (IND = investigational new drug) to take a volunteer to test the pharmacokinetics in the same person before placing the new drug into their system. Some tests cannot be altered when testing. For instance, testing maximum allowable dosage will be tested on dogs rather than humans. (Mulder ,2006) ENVIRONMENTAL CONSIDERATIONS The removal of chemical wastes from Virginia Tech is a streamlined process. Similar regulations could take place in other locations or facilities. The containers for the waste are provided from the university, as well as the labels. Waste removal is prompt, and only requires a quick phone call. Of all the wastes in our design, only one item is biological in nature. The enzymes that will be used are obviously biological products. However, enzymes do not fall in the category of biological hazards (Egan, 2008). The only significant environmental hazards in this project are the acids, and the current infrastructure setup at Virginia Tech (VT EHSS, 2008) is experienced and capable of handling this task. 23 The Hazardous Waste Disposal Program (a division of Environmental, Health, and Safety Services) explains in detail how to handle the disposal of hazardous chemicals. This particular design calls for the use of hydrochloric acid, a major component of gastric fluid, to be used. Instructions for disposal of such acids are as follows: Wastes should be in sealed containers without any sign of leakage The container should be full but not overflowing The maximum container weight is 22.7 kg (50 pounds) and volume is (18.9 liters) 5 gallons Stored waste should be in appropriate storage cabinet, according to the chemical compatibility All containers must be labeled with hazardous waste label and the requested information all completed Waste label information of: Department, Building, Room, Name, Phone, Size, Proper chemical name, Components of waste and their percentages, pH, Written and signed name Schedule a waste pickup Send label waste copy to Environmental, Health, and Safety Services ALTERNATE DESIGNS Adsorption Models The adsorption models shown below are all representing the small intestine. With the small molecule drugs as the focus of the project, most adsorption takes place in the small intestine. In Table 2 shown below you can see some of the advantages and drawbacks of the models. A high pressure filter is our first and most simple design. As shown in Figure 7, this model places the contents of the stomach on the left side of the filter and places the contents of the bloodstream on the right side of the filter. There is a mechanical agitator on the left side of the filter as well to increase the speed of filtration. 24 A hollow fiber membrane is a strong candidate for representing the small intestine. In Figure 8, the hollow fiber membrane is shown in a cylindrical nature to accurately represent the physical nature of the small intestine. One of the drawbacks of the hollow fiber membrane is the membrane will not have uniform filtration when modeling. However, this can be accomplished by increasing the pressure in the filter and adding a recycle element to the reactor. There are physical and chemical constraints to the membrane, but those constraints are high heat and corrosive substances which do not play a factor in our model. Stomach/Enzymatic SI Models For modeling the stomach and small intestine several things should be taken into account. For instance, the stomach is a pretreatment phase. Due to the low pH and very acidic environment of the stomach, the small molecule drugs are designed to pass through the stomach and get adsorbed in the small intestine. Most of the enzymatic reactions happen at the beginning of the small intestine in the duodenum. The list of advantages and drawbacks are shown below in Table 3. The double enzyme model (DEM) will be a realistic model for our system. This model will accurately represent the stomach and small intestine from an enzymatic level. This figure is shown by Figure 9. This is simply a packed bed of immobilized enzymes that will react with the small molecule drug. If the drug needs a longer reacting time there could be a recycle portion of the reactor added to the end of the packed bed and returning it to the beginning of the column. Unfortunately, one drawback is that not all of the enzymes will play a factor in the model. The single enzyme model (SEM) will be less expensive than the double enzyme model. The single enzyme model only accounts for the enzymes in the small intestine. This is a fair assumption due to the fact that the enzymes in the stomach do not play a role in the breakdown of the small molecule drugs. The drugs are typically designed to pass through the stomach so it can make it to the adsorption stages of the small intestine. In Figure 10 the model is very similar to the double enzyme model except there are no enzymes in the stomach. This will reduce the cost of the system. 25 The majority of design analysis of this project will be performed by chromatography analysis. Specific times that samples are taken from the bioreactor will have to be recorded. Samples would have to be taken at the exit of the model as well as within the model. These specific locations (where samples will be taken) will be explicitly defined next semester. Different components and their concentration could be determined by anion exchange chromatography, with the knowledge that different compounds of the drug measured for will elude at different times. A spectrophotometer (commonly embedded within the chromatography model) would also be necessary. This would provide the information necessary to construct the two compartment model Other Considerations A Pig Stomach could be a very positive way to represent the model due to the stomach being a living system. This system would include all of the natural flora, enzymes, and proper filter size. However, there are several drawbacks that include a onetime use for each stomach, variability in each stomach, and possible ethical issues in taking the stomach from the pig. It would also be difficult to maintain a living system. PROJECT DESIGN The best design choice will be combining the single enzyme model with the perforated column membrane. This model is shown below in Figure 11 and accurately represents the GI tract for small molecule drug adsorption. In the GI tract the drug must pass through the stomach, then pass through the duodenum where the drugs will be broken down, then finally be adsorbed from the small intestine into the bloodstream. Due to the mechanical nature of this design, it follows only the theoretical path of the GI tract. The full model shows any enzymatic or chemical breakdown of drugs along with the adsorption stages of the GI tract. Design 1. Since this design follows the path through the GI tract it will start with a stomach simulation. The stomach tank would store a working volume of 2L of HCl, salts, and the capsulated drug. 26 The tank will be held at a heat of 37 ˚C to properly simulate the heat of the body, and the pH should be kept around 1-2. Instrumentation such as pH and temperature regulators would be implanted here to ensure proper conditions throughout the process. After a mixing tank, a peristaltic pump will pull out about 5 mL/s of the slurry and send it to the perforated column membrane. The retentate from the membrane would be the waste of the drug. This would be excreted from the body through the GI tract without affecting the body. The permeate from the membrane would be the adsorbed drugs and enzymes that will have an effect on the body in the blood stream. The separation is shown in Figure 1. The assumption in this model is the enzymes are inhibited in the blood stream. Since this project would use Captopril, an orally fed high blood pressure medicine that affects the blood cells, the assumption would be valid. To show the enzymes in the bloodstream there would be an immobilized enzyme column to simulate the interaction. Once the drug passed through the enzyme column, affinity chromatography would be used to measure the amount of drug that would interact with those enzymes. This design is shown in Figure 16. Assumption: Enzymes are absorbed into and interaction takes place in the blood stream. Difficulties: Though enzyme immobilization would save on enzyme costs (enzyme would be reused), it would be difficult to modify the concentration of the enzyme. Enzyme immobilization would have to be done by the company that the affinity column would be purchased from, and this would take time and significant cost. (How much more?) Recommendation: Due to the lower cost overall (enzyme cost would be the most significant cost in this design) and simulation of food inhibition as well as enzyme drug binding in the column, this design does receive our top recommendation. Pharmacokinetics could most effectively be studied with this design; however, the other two designs could simulate portions of what this design could with less possible investment. Depending upon what the client’s exact interests would be then design 1, 2, or 3 could all be valid options. Design 2 27 This design will work well with a pro-drug or enzyme inhibitor {Need to differentiate – Pro-drug is mostly a protein drug}. A pro-drug requires a specific enzyme to change form and produce a product. This product functions as a drug in the body. The fact that it can work with either type of drug is an advantage to this design. There will be a 2 liter tank containing a few salts such as KCl and NaCl, and a strong concentration of HCl. The pH will be kept between the range of 1-2, and this tank will represent the stomach. The temperature of the tank will be 37°C, regulated by a heat exchanger. The encapsulated drug will be introduced into the stomach and then be dissolved. The stomach will be removing the gastric fluid at a rate of 5 mL/s. The second compartment will represent the small intestines. This tank will have to have a pH of 4-5 and be maintained at body temperature. The gastric fluid containing the drug will be mixed with a buffer solution as well as a sugar solution containing enzymes. These will be allowed to mix in the second compartment, and will allow sufficient time for enzyme drug interaction, and flow to the next compartment. In the third compartment, there will be a perforated cylinder membrane. The enzymes are quite large in comparison to the small molecular weight pro-drug, and the products of the prodrug; therefore separation will occur. The pro-drug and its products will permeate through the filter, and the enzymes will be forced to pass through as retentate. The permeate will be collected and anion exchange chromatography will be run. Due to the different charges of the product and the pro-drug, these two molecules will elute at different rates. The pro-drug and its product often have different charges in the human body because to cross a membrane, the product might have the proper properties to diffuse, but the pro-drug does not have the right charge and will be forced to exit into the large intestines. This design can be seen in figure 17. Assumptions: The pro-drug will be assumed to have sufficient time to react with the enzymes when in compartment two. Not all of the pro-drug will be converted into its products, just as in 28 the body, but a comparable level of conversion will occur. There are no outside interactions in the process that have not already been mentioned. Difficulties: This design would be exceptionally expensive to implement. Enzyme cost would be extraordinary, and where other designs would be able to reuse the enzymes (as they are immobilized, this design would require a separation process to recycle the enzymes. This would be necessarily easy, as the enzymes would have to very well purified, otherwise they would contain contents of the pro-drug and its product and would likely influence the results of product produced that we measure in our chromatography step. The second challenge of this design is achieving a comparable reaction rate in the second compartment with the enzymes and the pro-drug. This would be nearly impossible, and finding conversion rates of any type of drug with an enzyme is not readily available information. The body cannot possibly achieve 100% conversion of the pro-drug into its product, and neither can this design. However, matching the conversion rate of the body with our design would challenging and expensive. Design 3 The stomach is simulated by a tank of hydrochloric acid with a working volume of 2 liters. It is kept at a temperature of 37oC by a heat coil, and a pH sensor is linked to acid and base reservoirs to keep the pH between 1 and 2. A slurry of food and drug is added to the tank to simulate ingestion. The base reservoir will be used as a buffer solution to mix with the slurry upon entrance into this section to better simulate small intestine conditions. This slurry, after being well mixed, is pumped out at a constant rate of 5 mL/s into the duodenum section of the design. The majority of adsorption in the small intestines takes place in the duodenum. This section has immobilized enzymes placed into the packed column to interact with the drug and cause the desired enzyme substrate binding. The contents continued through into the next section representing the rest of the small intestine. This section is composed of a hollow fiber membrane to separate the slurry from the drug. The slurry passes out as the retentate along with some buffer solution and can likely be recycled. The permeate is composed of the drug and is sent to an affinity chromatography unit to separate out how much drug is left. By 29 determining how much drug permeates out it would be possible to determine how much is adsorbed and how affinity changes with food interaction. This design can be seen in figure 18. Assumptions: There are no outside interactions with the process not already mentioned. Enzymes are not adsorbed into the blood stream but are used inside the small intestine. Difficulties: There could be problems forcing the slurry through the packed column. It may not flow through and could cause accumulation and fouling. The major limitation of this model is that it will likely not be able to demonstrate food’s inhibitory effect upon Captopril in decreasing adsorption. This design is also fairly unrealistic, as enzyme substrate binding (Captopril and ACE) takes place in the blood stream, not the small intestines. This will change the affinity of the enzyme to the drug. This is one area where design one succeeds, making it our overall recommendation. Mass Balances According to the literature, the average human will adsorb roughly 75% of the overall drug input into the body through the small intestines (Stewart et al, 2009). This was determined through carbon-14 labeling. This effectively means that 25% of the drug will never be used and exits the body as waste. To simulate stomach acid, two liters of 0.02 M HCl will be added into the stomach bioreactor. This acid will be neutralized by the necessary buffer solution to raise the pH to nearly 5. This work can be seen in the sample calculations section. A standard dosage (50 mg) of Captopril will be added to the acid and will flow out of the reactor at 5 mL/s. When Captopril is taken within 2 hours of a meal, the food greatly inhibits the adsorption of the drug through the small intestines. To simulate the food in the stomach, 100 g of Carnation instant breakfast will be mixed in making a slurry. When this is the case, adsorption of the drug into the bloodstream is decreased to about 45%. Of the drug that enters the blood stream, only roughly 60% of it will ever interact with the drugs targeted enzyme, Angiotensin Converting Enzyme (ACE). When food inhibits the drugs adsorption into the body (one of the effects our design can model), roughly 27% of the drug has any type of impact upon our body. 73% of the drug is wasted {Seem in conflict with the 25% waste}, and simply passes through our 30 body just like anything else that is indigestible. To show this the mass balance can be found in figure 20. However, this plays a major role in regulating the blood pressure of the patient, as only 27% of the drug significantly decreases the apparent affinity of ACE to Angiotensin I. Captopril doesn’t cease the conversion of Angiotensin I to Angiotensin II (two proteins that regulate our blood pressure), it simply slows the process down. Angiotensin II is three times more potent in constricting in our blood vessels then Angitotensin I, which is why this drug is effective (Stewart et al, 2009.) Our design is going to be judged a success if we can effectively simulate two steps. One is how close our design’s mass balance is to a patient’s mass balance in the small intestines. The second comparison in mass balances is made in the blood stream. When testing begins, numerous parameters will have to be adjusted. This is a simulation, so we want to create a scenario that is directly comparable to the human body. These are the parameters adjustments that are forecasted. Transmembrane pressure in perforate column membrane Enzyme concentration in affinity chromatography column Flow rates of the buffer solution and fluid exiting the stomach vessel The transmembrane pressure will play a major role in how much of the drug is absorbed through the perforated column membrane (the small intestines lining). Currently our system runs on a pump system, and this is will create the pressure to affect the retentate and permeate ratio. Immobilizing the enzyme in the column for chromatography will be performed from the company that the column is purchased from. If the enzyme concentration is not correct to effectively simulate 60% of the drug interacting with the enzyme, the concentration may have to be modified. This would be a very expensive modification to make as the cost of the chromatography column is one of the major costs of this design project. Economic Analysis 31 The focus of this project was to make a bioreactor that could simulate the adsorption through the small intestine into the bloodstream and work with drug reactions. By simulating this, it was hoped that information gathered from the testing would help in further testing on animal and even humans. By providing the data produced from the design these animals and humans could be kept safer. There is no real price that can be associated with a human life, but there is a monetary equivalent to this design. Building the artificial system is the main cost of the whole design. Giving a generous estimate to compensate for any unforeseen problems that could arise, Table 4 shows the costs for each of the major functioning parts and substances added on a per use basis along with an overall estimate of the whole cost. The costs of the Captopril (Health Warehouse, 2009), the HCl (Science Kit, 2009), and the Instant Breakfast (Drugstore, 2009) add up to very little compared to the major costs. The major costs are shown to be the enzyme ACE, the vessel simulating the stomach, the pumps needed, and the chromatography column. The ACE is very expensive, because it is very difficult to localize and produce (Bachem, 2009). The Vessel simulating the stomach is expensive because it contains all instrumentation and control features needed for the design to work and further features that could be utilized for differing designs depending on different drugs or enzymes or different experiments (Culotta, 2009). Three pumps will be needed to keep the flow constant throughout the whole system (Boylan, 2009). The chromatography column would cost about $8000 since it would need to be custom made for the project (General Electric Healthcare, 2009). One other cost to account for is the membrane. If the entire adsorptive surface area of the small intestine was to be accounted for using this membrane it would cost over 1 million dollars by itself, but since only 1 m2 is being used then the cost is reduced significantly (Fischer Scientific, 2009). PROJECT EVALUATION When 50 to 300 million dollars are spent in a clinical trial per drug, the design of a bioreactor can be very expensive and still an advantage to the pharmaceutical company doing the drug testing. That is with the assumption that your design can accurately model the small intestines 32 and stomach of the GI tract, showing how the drug is changed and adsorbed into the body. Currently all bioreactors being developed for this purpose are still in their research and development stage. To establish if this project is a success is establishing a model that will successfully model the drug chosen. The drug chosen, Captopril, works in the bloodstream. With the current model we have chosen it successfully establishes all of the parts of the gastrointestinal tract the oral drug would have to pass in order to get in the blood. This project did establish a relatively low cost for most of the equipment. In all, this project established what it needed to set up for future work. DESIGN SCHEDULE In designing this artificial stomach and small intestine bioreactor, there have been many obstacles to overcome and many issues to work through. The original idea for the reactor was to have a single chamber, representing the stomach with its chemical reactions, that would account for the intake of all substances, the reactions that would take place, the adsorption and absorption into the body, and the removal of wastes. With the discovery of enzymatic reactions occurring in the duodenum and that most adsorption occurs later in the small intestine the idea of keeping a single chamber reactor was thrown out. Also, with choosing Captopril, this drug reacts in the bloodstream and this had to be properly represented. Another issue that that is still troublesome is the fact that there is very little research on the idea of a stomach/small intestine bioreactor. Lack of information in research made us look at the basic levels of information on how the stomach and small intestine worked and develop our own designs based on that. Timeline Task of: Neil Templeton (NT), David Morgan (DM), Kevin Richter (KR) Fall 2008 33 Sep. 18 – Dec. 4 Learn background of how stomach and small intestines work (NT, DM, KR) Oct. 1 – Dec. 4 Meet with the faculty and outside researchers that are doing relevant work to our project (NT, DM, KR) Oct. 1 – Dec. 4 Learn of specific biological conditions that we will try to emulate in our mechanical design of the stomach and intestines (NT, KR) Oct 1 – Oct 8 Create Scope of Work and Cover Page (NT, DM, KR) Oct. 9 Revise cover page and scope of work due (NT, DM, KR) Oct 10 – Oct 22 Revise Scope of Work (KR) and Cover Page (DM). Begin Modeling and Economic Considerations (NT) Oct. 23 Cover page (DM), scope of work (KR), and resources (NT) due Oct 23 – Nov 13 Work on Safety (KR), Regulatory (KR), and Environmental plans (NT) and work plan (DM). Begin Report compiling (NT). Continue Modeling with Alternate Models (NT, DM, KR) Nov. 13 Cover page (DM), scope of work (KR), resources (NT), safety (KR), regulatory (KR),environmental(NT), and work plan (DM) due Nov 13 – Dec 4 Develop Presentation (DM) and continue working on Report (DM, KR, NT) Dec. 2 & 4 Oral presentation due (NT, DM ,KR) Dec 4 – Dec 15 Prepare Final Report (NT, DM ,KR) Dec. 16 Revised final report due (NT, DM ,KR) Spring 2009 34 Jan 19 – Feb 16 Change Final Report per Advisor’s recommendations and Prepare Midterm Presentation (NT, DM, KR) Jan 19 – May13 Establish By-weekly meeting with Dr. Mike (NT, DM, KR) Feb 15 Choose between Enzyme inhibitory drug and Pro-drug (NT, DM, KR) Feb 16 Mid Term Report due, choose drug (NT, DM, KR) Feb 16 Revise Work Plan (NT, DM, KR) Feb 28 Begin Modeling (Report Volume Flowrate Input and Output) (NT, DM, KR) Mar 1 Choose membrane and verify specific enzyme interaction (NT, DM, KR) Mar 2 Revised Work Plan due (NT, DM, KR) Mar 3 Establish all alternative designs and choose the best design (NT, DM, KR) Mar 4 Develop Block Flow Diagram for each design. (NT, DM, KR) Mar 15 Determine Components for Mass Balance (NT, DM, KR) Mar 20 Practice Presentation (NT, DM, KR) Mar 20-Apr 10 Develop Michaelis-Menten Enzyme Kinetics model (NT) Mar 22 Determine if enzymes follow Michaelis-Menten approach (NT) Mar 23 Mid Term Presentation (NT, DM, KR) Mar 23 Begin preparation of draft of Final Report. Establish and problems with the chosen design (NT, DM, KR) Mar 24 Determine enzyme inhibitors to be concerned with (NT) Mar 25 Determine ideal substrate concentrations of drug to use (NT, DM, KR) Mar 25 Finalize Mass and Energy Balance (Volumetric Flow rates) (NT, DM, KR) 35 Mar 30 Finalize Economic Plan (NT, DM, KR) Mar 30 Design model with SuperPro (KR) Apr 15 Create Poster and Practice Presentation (NT, DM, KR) Apr 20 Print Poster (NT, DM, KR) Apr 27 Present Poster (NT, DM, KR) May 13 Final Report due (NT, DM, KR) Meeting with Advisor Dr. Mike every two weeks (NT, DM ,KR). Start and Finish Dates This project requires a strict monitoring of when work is to be done. It is for this reason that distinct start and finish dates are outlined in the timeline, as well as whom among the team will be addressing the task. Some of the tasks are not given a specific date, and just a month rather, because it is difficult to estimate just how much time that individual task is going to take. For a general synopsis of the tasks to be completed, the Gantt chart can be viewed in the appendix (Figure 12). Non-routine and Routine Tasks This is a research based project, and it is currently unfunded. Tests are not being taken out in the field on a weekly basis, so the idea of a routine task is in inadequate way to define our project. However, there is a degree of repetition that can be seen in this senior design project. Routinely there are meetings with Dr. Mike Zhang, once every two weeks, to discuss progress and address questions. Routinely meetings are to be held, at least once a week, to further progress to our eventual goals. As for non-routine tasks, a great deal of work has had to be done to make sure the background knowledge is known to be able to adequately develop a design. It has been very challenging to develop a design for the stomach and small intestines, because so much background knowledge 36 is required before design can begin. The majority of the work done this semester has been non-routine tasks. This can be seen in the timeline. Resource Constraints A year of time has been given to complete this project. All of the team members are undergraduates a part of Biological Systems Engineering. Since this is largely a biomedical project, to be able to accomplish this project, several human resources have been established that are outside of the department. These resources can be seen in the Appendix A of this report. Currently, no equipment has been leased for this project, but this will likely change in the design development coming in the spring semester. No outside funding has been enlisted. Regarding funding, the work done in this project is in the expectation that a company (likely a large pharmaceutical company) would purchase this design. Before that could happen, the design would have to be built in-house, and tested appropriately. The actually building of our design is a goal, but it may or may not be feasible based upon the funding of this project. One of the larger constraints of this project is the funding, as most of the development will have to take place without any actual testing. If a bioreactor was to be built, it would greatly improve the team’s ability to judge the cost of production, as well as how accurately the bioreactor modeled the small intestines and stomach. This would allow a standardized bioreactor to be determined and give rise to possible changes that could make the device to work more efficiently or work more specifically for whatever test it is used for. If a bioreactor was built, it would quickly (relative to animal testing) allow for observation of differing drugs and biological chemicals. It would give a more accurate representation of how adsorption would work by allowing for testing. It would also allow the problems with possible high concentrations of harmful chemicals to be observed and countered. Accomplishments and Future Considerations The main goal of the first semester was gaining knowledge about how and why the design of a stomach bioreactor would be developed. Discovering the intricacies of the gastrointestinal tract was vital to the report, and one of the first discoveries was that for adsorption to be 37 accounted for, the small intestine had to be incorporated. The application of the design was found to be in drug delivery and adsorption, so general drug kinetics had to be understood. With a general understanding of drug kinetics and possible drugs that could be utilized, different modeling schemes were discussed and designed. Many considerations for how the drugs could be administered, how the human GI tract would be affected, and what kind of safety regulations had to be followed were all taken into account. Finally, the design would have to be somewhat economically sound. When dealing with the enzymes in the GI tract, expenses could become very high. Since the application of the design would ultimately be in safety, the justification for the price would be acceptable. The accomplishments of the second semester were extremely specific. Flowrates, materials, and adsorption characteristics were chosen for the model. The drug Captopril was chosen, which is a high blood pressure medication from a small molecule drug. It is established that this is a feasible study to actually produce the model in this paper. It may be a pricy model, but there is no price too high for safety. For future work, the highest priority thing is to get funding for this project. The NIH is the number one prospect for funding for this model. If design can produce the in vivo measured rate constants already known, then the ability to predict a drug’s performance in the human body exists. This could also establish better dosages to minimize harmful side reactions of the drugs. This project should be continued with actually producing the unit designed or updated from this paper to show drug adsorption in the human body. From this project a computer simulation could be established prior to building the first reactor. If funding is found there is potential to go beyond even the reaches of this project. The vessel being used is used to control only a few aspects of the project like temperature and pH, but there is potential to move into different fields of study using the added instrumentation. This instrumentation includes DO probes and control and foaming control. Many different experiments could be designed to with this in mind. One such example is the effects of potential drug altering products from the addition of bacteria in the stomach. 38 CONCLUSION The main focus of the fall semester was to focus on learning the information needed to make this a feasible project. Learning the basics of the gastrointestinal tract, of enzyme kinetics, and of drug delivery were all vital to creating a proper focus for the project. The change in focus from a stomach bioreactor to a stomach and small intestine bioreactor and ultimately to a small intestine and blood stream bioreactor was necessary to incorporate small molecule drug adsorption. Picking the correct design was a major focus that required time and effort. The different designs had varying benefits and drawbacks that made each possible choice good and bad in specific ways. By incorporating the best of the each design the best choice was made. The model chosen to properly represent Captopril being adsorbed in the small intestines and reacting in the blood stream is the single enzyme model. The model first has a pretreatment phase of the stomach where the drug will be mixed with Hydrochloric acid (HCl), Captopril, and the food buffer. This will enter a mixing cylinder that will raise the pH to 4. Then the drug will be filtered by a perforated column membrane. This membrane column will allow about 45% of the drug to pass through, simulating small intestine adsorption, to be absorbed into the bloodstream. The blood stream and the ACE inhibitor will be represented by a chromatography unit. The chromatography unit will allow the drug to interact with the enzyme and proper measurements for how the drug interacted with the enzyme. The spring semester established design specifications for the model. The information in this report should be sufficient enough to establish a computer-based model. If a computer model could establish more information on this design, construction would be likely on this model. More specifics were also found in the spring semester. The specific design was created and along with the chosen drug, the proper amounts of each substance to be used was found, the mass flow was found, and an economic analysis was formed. With all of these parts of the project found, the implementation of the project became even more of a reality. Compared to the monetary cost and the inherent risk associated with not using this design, using the design would be the best idea all around. There will be less money 39 spent on getting necessary drugs to people who need them and less danger to people when they find themselves in need of new medicines. REFLECTIONS During this design project the team learned time management skills, leadership roles, and abilities to compromise. Time management and compromise went hand and hand in this project. This meant we had to be reasonable with what we demanded from our team members because our teams did have other activities going on besides senior design. This also made scheduling team meetings at reasonable times and distributing fair amount of work evenly throughout the team. If we were to do something different, it would be establishing contacts prior to the project beginning. If there was a solid base for where to begin this project it would have been a more enjoyable process. It is not a bad thing to redirect the project when the original project is infeasible but when it happens several times throughout the project it just is not fun. We also probably could have done better on keeping track of everything. It would have been good to be more clear on the importance of keeping to the dates established for carrying the project through. While everything we really wanted to do was accomplished, they were not all at the same times as our original timeline predicted. For project management, it would be easier if we had more areas of interest we were pointed to. Our group would need to establish a stronger literature review at the beginning of the project. This would include an earlier primitive design in order to establish where the project is headed at the beginning. It also would have been nice to actually build our design and have a working model to both show the process more clearly and facilitate our own understanding of how our objective could be accomplished. However, it was not within the scope of the project time-wise to make this possible. I do not think it would have been possible with the amount of research and understanding we had to incorporate into the project, but it would have been nice. 40 Overall the experience was extremely beneficial in our own application toward our future career and our lives in general. Learning how to deal with a team in good circumstances and in good circumstances is vital to succeeding in industry. Applying research and engineering skills together on this project makes the experience even more beneficial. 41 APPENDIX A List of Figures Input Pressure Retentate Pressure Permeate Pressure Figure 1. Diffusion simulation. 42 Oral Drug Excretion in air Storage Sites (Ex: fat) Lungs Blood Peripheral Tissues Free Drug Metabolism GI Tract Drug Plasmid Protein Complex Liver Drug Metabolites Drug Metabolism Kidney Metabolism and excretion Metabolites in bile Drug and Metabolites in Waste Figure 2. Drug kinetics model. The bioreactor design (and model) will incorporate the stomach, small intestines, and blood stream which are highlighted in green in this figure. Figure 3. Two compartment model of drug kinetics. 43 Figure 4. Gastrointestinal tract (Mariana Ruiz Villarreal, 2006). 44 Figure 5.Anatomy of the stomach. 45 Figure 6. Duodenum of the small intestines. Figure 7. High pressurefiltration. 46 Figure 8. Hollow fiber membrane. Figure 9. Double enzyme reactor. Figure 10. Single enzyme reactor 47 Figure 11. Simplified bioreactor design. 48 Gantt Chart 9/9/08 Learn Biological Conditions of GI Tract Create Scope of Work and Cover Page Begin Modeling and Economic Considerations Saftey, Regulatory, Environmental Plans Work Plan and Alternate Models Develop Presentation and Report Prepare Final Report Prepare Mid Term Presentation Revise Work Plan Modeling and Economic Consideration Mass Energy Balance, Volumetric Flowrates Finish Presentation Draft Final Report and Economic Plan Create Poster and Practice Presentation Figure 12. Fall Semester Gantt chart. 49 10/29/08 12/18/08 2/6/09 3/28/09 5/17/09 08/31/04 10/20/04 12/09/04 01/28/05 03/19/05 05/08/05 Learn Biological Conditions of GI Tract Create Scope of Work and Cover Page Begin Modeling and Economic Considerations Safety, Regulatory, Environmental… Work Plan and Alternate Models Develop Presentation and Report Prepare Final Report Prepare Mid Term Presentation Revise Work Plan Economic Plan Mass and Energy Balance, Volumetric Flowrates Drug and Enzyme Research Membrane Implementation Create Poster and Practice Presentation Finalize and Edit Paper Figure 13. Spring Semester Gantt Chart. 50 Figure 14. Decision Flowchart. 51 Nuclear Integrins, Receptors, 2% DNA, 1% 1% Other Receptors, 2% Miscellaneous, 1% Ion Channels, 7% Enzyme Inhibitors, 47% Transmembrane Receptors, 30% Figure 15. Breakdown of currently marketed drugs in the United States today (Copeland, 2005). 52 Gastric Fluid Stomach Buffer Solution -Drug -Buffer Food Slurry Encapsulated Enzyme Inhibitor Drug Vessel Hollow Small Intestines Fiber Membrane Permeate Retentate -Slurry -Drug Filtration Affinity Chromatography w/ Immobilized Enzymes Blood Stream No EI Interaction SAMPLE Figure 16. Design 1. Blood Stream Inhibition Reactor. 53 EI Interaction Affinity Chromatography Gastric Fluid Encapsulated Pro-Drug Stomach Enzyme Solution Vessel Interaction in Small Intestines Vessel Buffer Solution Adsorption in Hollow Small Intestines Fiber Membrane -Pro Drug -Products Permeate -Enzymes Retentate -Pro-Drug -Products Ion Exchange Chromatography Ion Exchange Chromatography Figure 17. Design 2. Pro-Drug Non Immobilized Reactor. 54 Gastric Fluid Encapsulated Enzyme Inhibitor Drug Vessel Stomach Buffer Solution Interaction in Small Intestines Adsorption in Small Intestines -Drug -Buffer Permeate Food Slurry Affinity Chromatography w/ Immobilized Enzymes Hollow Fiber Membrane Retentate Ion Exchange Chromatography -Slurry -Drug Ion Exchange Chromatography Figure 18. Design 3. Non-Food Enzyme Inhibitor Reactor. Angiotensin I ACE Captopril Uninhibited Inhibited Figure 19. Competitive enzyme inhibition. 55 Figure 20. Enzyme kinetics of Captopril. This figure intentionally showcases interactions with colors. In the case of the enzyme (ACE) and the substrate (Angiotensin I), blue and red combine to form the enzyme substrate complex, which is purple. The same effect is seen for the enzyme (ACE) and inhibitor (Captopril). Figure 21. Mass Balance. 56 List of Tables Table 1. Design of adsorption models. Design (adsorption) Advantages Drawbacks High Pressure - Realism - Can’t represent plug flow - Hollow Fiber Would probably have higher yields of adsorption - Cheap - Simple - Well understood - Realistic model of system - - Modest energy requirements Little research done on application - Expensive filters - No waste - Large surface area per unit volume - Low cost of operation Table 2.Decision matrix on alternate designs. Weight (%) High Hollow Pressure Fiber Single Enzyme Double Enzyme Pig Stomach Feasibility 35 8/10 8/10 8/10 6/10 3/10 Realism 35 2/10 8/10 7/10 7/10 8/10 Cost 10 10/10 6/10 7/10 7/10 2/10 Longevity 10 9/10 7/10 8/10 7/10 2/10 Ease of Use 10 8/10 6/10 8/10 6/10 1/10 Total Score 100% 62% 75% 75.5% 65.5% 43.5% 57 Table 3. Design of enzymatic systems for stomach and small intestine. Design (Enzymatic) Advantages Drawbacks Double Enzyme - Strong model of enzymatic reaction in stomach and small intestine - Enzymes in the stomach do not play a role in most small molecule drugs - Higher cost than single enzyme model Single Enzyme - Cost - Neglects Enzymes in Stomach Pig Stomach - Very similar components as human stomach - Very difficult to reuse pig stomachs after one use - Allows for passive diffusion to naturally take place - Represents adsorption in the stomach rather than the small intestine where most adsorptions of small molecule drugs occur - Ethical issues 58 Table 4. Economic Analysis. {References? Where did this come from?} Product Hcl (2 L) Captopril (50 mg) Instant Breakfast (60 g) 3 pumps Chromotography Column Price ($) 160.00 237.50 2.10 9,000.00 8,000.00 Membrane (1 m2) ACE (100 mg) Vessel Mixing/Storage Tank Millipore Sterile Syringe Filter 2,000.00 305,000.00 25,000.00 400.00 Total 349,803.64 4.04 59 Qualifications Required Prerequisite Courses: BSE3524 Unit Operations BSE3504 Transport Processes CHEM3615 Physical Chemistry CHEM1035 General Chemistry BIO1105 General Biology BIO2604 Microbiology BSE3154 Thermodynamics ESM3024 Fluid Mechanics Required Co-requisite Courses BSE4125 Senior Design BSE4504 Bioprocess Engineering BSE4544 Protein Separation Recommended Courses CHEM4544 Drug Chemistry BSE4524 Bioprocessing Plant Design Estimated Commitment from a 3 member student design team About 4 hours a week per member Skills to be developed for successful completion of this project Time management Communication and team work Basic principles of membrane separations Basic knowledge of the digestive system Considerations for economics Technical writing Advisors Dr. Mike Zhang Dr. Robert Grisso Human Resources Sandra Daniel John Weisbrod Jack Evans John Stefanyk D. 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