Reproduction of Microorganisms Sara Austin • • • • • • Microorganisms are literally “microscopic organisms”, which can only be seen with a microscope. They include bacteria, fungi and viruses. Helpful microorganisms are used in industry and biotechnology, but Harmful microorganisms cause many human diseases Understanding their reproduction is essential to interacting safely We control bacteria to help us, and to try to prevent them from harming us Teaching Strategies The Hook: the FiveSecond Rule –is it true? Two college students examined food dropped on the floor of a cafeteria for various lengths of time, and measured bacterial growth. http://abcnews.go.com/Video/playerIndex?id=3269384 (note 12 second commercial plays first) Stop the video once the study is described, and ask for predictions from students as to the outcome. Curriculum Correlation This concept is part of the SBI3C course, within the Microbiology strand Three types of microorganisms are examined: bacteria, viruses, and fungi These microorganisms have different types of reproduction diagrams and life cycle graphics are essential Reproduction in Microorganisms Ministry Curriculum Expectation C3.4 By the end of the course, students will be able to explain the different methods of reproduction in various types of bacteria, viruses, and fungi Overview - Microorganism Reproduction Bacteria: Binary Fission Conjugation Viruses: Lysogenic cycle Lytic cycle Retroviruses Fungi: Sporulation Sexual & Asexual Overview: Bacterial Reproduction Binary Fission Binary Fission: the single strand of DNA replicates, resulting in identical genetic material being transferred to each new cell. Following replication of the genetic material, the bacterium produces a cross wall, dividing the cell in to two identical bacteria, which may separate or remain attached. Animation of Binary Fission: http://highered.mcgrawhill.com/olcweb/cgi/pluginpop.cgi?it=swf::500::500::/sites/dl/ free/0073375225/594358/BinaryFission.swf::BinaryFission Actual film of bacteria dividing by binary fission: http://cellsalive.com/qtmovs/ecoli_mov.htm Overview: Bacterial Reproduction Conjugation 1- Donor cell produces pilus (cytoplasmic projection) 2- Pilus attaches to recipient cell, brings the two cells together 3- The mobile plasmid is nicked and a single strand of DNA is then transferred to the recipient cell 4- Both cells recircularize their plasmids, synthesize second strands, and reproduce pili. Both cells are now viable donors. From http://parts.mit.edu/igem07/index.php/Boston_Univers ity/Conjugation Overview: Viral Reproduction Viral Replication occurs through a Lytic cycle. Some viruses are dormant for some time, and maintain a Lysogenic cycle until activated to enter the Lytic cycle Overview: Viral Reproduction LYTIC CYCLE: Viral genetic material injected into host cell and takes over machinery to produce parts of future viruses. Parts are assembled and the cell explodes (lysis), releasing more harmful viruses. “Virulent” viruses undergo a lytic cycle. Overview: Viral Reproduction Lytic Cycle Steps …follow the moving yellow oval as the steps are highlighted • Attachment and entrance • Synthesis of protein and nucleic acid • Assembly of units • Release of new virus particles Overview: Viral Reproduction LYSOGENIC CYCLE: Viral genetic material remains dormant, replicated with the host cell DNA each time the cell divides. “Temperate” viruses undergo a lysogenic cycle. At some point, the lytic cycle is triggered. Overview: Viral Reproduction RETROVIRUSES contain RNA as their genetic material. The virus contains reverse transcriptase, which it uses to make DNA from an RNA template (this never occurs in cellular organisms). The cell then follows the directions in the new DNA code, and the lytic cycle is triggered. Teaching Note: It is worth reviewing the functions of DNA and RNA. Viruses are classified according to their genetic molecule (DNA or RNA), and whether the nucleic acid is singlestranded or double-stranded. Overview: Viral Reproduction Web-based Animations Lytic Cycle animation: http://www.courses.fas.harvard.edu/~ biotext/animations/lyticcycle.html Lysogenic Cycle animation: http://www.courses.fas.harvard.edu/~ biotext/animations/lysogeny.html HIV life cycle animation: http://highered.mcgrawhill.com/olcweb/cgi/pluginpop.cgi?it=swf ::535::535::/sites/dl/free/0072437316/12 0088/micro41.swf::HIV%20Replication Overview: Fungal Reproduction Fungi reproduce both asexually and sexually but always produce spores as reproductive cells. Spores are usually dispersed by air currents, and germinate in suitable conditions. Animation of Fungal Reproduction http://bcs.whfreeman.com/thelifewire/conte nt/chp31/31020.html Overview: Fungal Reproduction •Haploid hyphae, found below the soil, fuse to begin reproduction. •The hyphae enlarge, break through the soil as white spheres called buttons •Buttons grow and mature, forming a stalk and a spherical cap •Within the cap, gills form, consisting of many tangled, modified hyphae. •Specialized extensions from gills containing two haploid nuclei of different parents fuse, then undergo meiosis to produce four haploid spores, which are released over several days Prior Knowledge Students will have some basic concepts about microorganisms from previous grades: the role of microorganisms in food chains and ecosystems, the immune system; the exchange of genetic information; bacteria, plant-like and animal-like protists, fungi, and viruses. Skills: Students should have some basic microscope skills and be able to recognize eukaryotic cells (plant and animal) by their organelles. Lesson Scope and Sequence In many texts, the Microbiology strand is organized by type of microorganism, with reproduction integrated (e.g., Nelson College Prep Biology 11). This lesson scope and sequence offers a means to teach all the reproductive methods at once, to compare them, and to relate them to technology and society. Subject Assessment FOR/ AS/OF Lesso n2 Viral Replication Gizmo worksheet, Online assessment FOR AS Lesso n3 Fungal Reproduction & Lab Whole-class wall diagram Lab Report FOR AS Lesso n4 Comparison Activity Activity (DI options) OF Lesso n5 Applications Research Presentations AS/OF Students can organize a Lesso Intro & FOR comparison ofExit thediagram, various n1 Bacterial True/false quiz AS mechanisms Reproduction of reproduction Lesson Plan Subject Activities Assessment FOR AS/OF Lesson 1 Bacterial Reproduction Lecture with animations, photos, Yeast Demo, microscope slides Exit diagram, True/false quiz FOR AS Lesson 2 Viral Replication Lecture with animations, Gizmo: Virus Lytic Cycle Gizmo worksheet, online assessment FOR AS Lesson 3 Fungal Reproduction Dung Chamber demo, Brief lecture with animations, microscope slides, mushroom lab Whole-class Wall diagram, lab work sheets FOR AS Lesson 4 Comparison Activity Class discussion for rubric design Research, work on products Completed product (DI) OF Lesson 5 Applications: STSE connections Lecture with videos, animations, photos Begin research projects: RAFT activities AS/OF Demonstration Build a dung chamber as an attention grabber for the content about Fungi: •Go for a hike and find some dung from a vegetarian animal (rabbit or deer pellets) •Put the dung in a petrie dish with a damp paper towel or sprinkle with water •Start about four days before this lesson so that students can see some real-life examples of the fungi as they proceed through the section content Demonstration Build a dung chamber as an attention grabber for the content about Fungi: Within a few days moulds will begin to appear on the specimen. Most beginners are unprepared for the extremely small size of many moulds and tend to overlook them completely. Invariably students using moist chambers for the first time complain that nothing is growing on their specimens, only to have an instructor point out at least half a dozen different moulds! Be sure to examine the material with a magnification of at least 15-20 times and with good bright illumination. Illumination is especially important and should be focused on the area of the specimen that is under examination. From http://website.nbm-mnb.ca/mycologywebpages/Moulds/Isolation.html Other Demonstrations Mouldy Bread Demo: Keep mouldy bread sealed in clear container – do not open! From Nelson Biology 11 College Preparation text p.141, eacher’s Resource p.247 Mushroom Dissection Lab/Demo www.biologyjunction.com/Mushroom%20 Dissection%20Lab.doc Yeast Fermentation Demo http://cccmkc.edu.hk/~sbjbiology/CERT%20BIO/Energetics/Res piration/Yeast%27s%20fermentation% 20%28demo%29.htm Peer Activity Student Exploration: Virus Lytic Cycle Release a lytic virus in a group of cells and observe how cells are infected over time and eventually destroyed. Data related to the number of healthy cells, infected cells, and viruses can be recorded over time to determine the time required for the virus to mature within a cell. http://www.explorelearning.com/index.cfm?met hod=cResource.dspDetail&ResourceID=448 Handout Students will receive a set of handouts as they progress through the lessons, briefly outlining the various steps of the reproductive cycles of Viruses, Fungi and Bacteria. A brief overview handout is available in the summary document. Suggested Labs Mushroom Dissection Lab www.biologyjunction.com/Mu shroom%20Dissection%20La b.doc Examination of Lichen http://lichens.science.oregonstate.edu/lab/L ABMATERIALS.htm Websites for Lesson Planning www.who.int/csr/don/en/ http://science.nelson.com/0176265252/teac hweblinks_ch02.html http://serendip.brynmawr.edu/sci_edu/wald ron/ http://www.lessonplanet.com/lessonplans/microorganisms http://www.tes.co.uk/taxonomySearchResu lts.aspx?keywords=micro-organisms http://serc.carleton.edu/microbelife/index.ht ml Potential Areas of Difficulty Students may think there were no effective treatments for diseases because they were undiagnosed in the past – but anti-infective agents been used for thousands of years. The Chinese recognized that mouldy soybean curd was effective against skin infections. Scabies was treated with sulfur. Mercury was used to treat syphilis. Viruses represent an example of the “which came first” riddle. Viruses seem to be a stage between abiotic and biotic organisms, yet they must have appeared after cells, as viruses cannot reproduce on their own. A decimal numbering system is also used for viral classification (e.g., H1N1). It was decided years ago that viruses would not use Latinized binomial terms. Students may think that mushrooms growing on trees only benefit nutritionally – but in fact, mushrooms can use trees to gain a better, sunnier position in a shady environment like a rain forest. Sometimes fungi climb tress and vines to release their spores from as high a position as possible. From Nelson Biology 11 College Preparation, Teacher’s Guide, Unit 2 Section Support, pp 165266 Potential Areas of Difficulty Pathogenic organisms and the diseases they cause do not remain static. The incidence of new of changing diseases caused by bacteria, viruses, and protozoa are increasing. If moulds are so ubiquitous, why are we not affected by all of them? Moulds are opportunistic organisms: they infect humans at sites of lesions, or when immunodeficient, or during serious diseases such as cancer or diabetes. Gene therapy diagrams look straightforward and reliable, but gene therapy is still experimental and controversial. Some stunning success stories, and some devastating failures. From Nelson Biology 11 College Preparation, Teacher’s Guide, Unit 2 Section Support, pp 165266 Visual Aids The Hook: the Five-Second Rule –is it true? http://abcnews.go.com/Video/playerIndex?id=3269384 Viral Geometry and Structural Diversity film http://www.microbeworld.org/ These fun soft microorganisms are sure to be popular with students and lead to good discussions and inquiries. The geometric structures of viruses are beautiful and can be used, along with genomic information, to identify them. (3 minutes 22 seconds) http://www.hhmi.org/biointeractive/dis ease/viral_diversity.html Prepared Microscope Slides of Microorganisms Available from science suppliers such as Boreal Safety Considerations Students should wash hands before handling (to prevent contamination) and after handling (for safety) all organic material. Proper microscope procedures should be reviewed. Mouldy bread should remain covered when examined by students. Mouldy dung should be disposed of by the teacher, wrapped, with care. Internet use carries its own safety hazards. Students must be supervised to ensure they remain on-task on lessonfocused sites. Evaluation Instruments: Comparison/Explanation Students create a comparison of reproductive strategies of bacteria (binary fission), fungi (spores, nuclear fusion), and viruses (lysogenic and lytic cycles). Students develop this by examining teacher-provided charts/posters/diagrams/videos (and do online research as needed) illustrating the life cycle and reproductive strategy of a representative from each of bacteria, fungi, and viruses. Evaluation Instruments: Comparison/Explanation Students choose the form of this comparison, as long as critical information is present: a song, a poem, a letter, a set of resumes, a business plan, a poster, an advertisement, a graphic organizer, a commentated video/podcast, a script. The rubric for all products is the same: students are being evaluated on their ability to explain the different methods of reproduction in various types of bacteria, viruses, and fungi. Students and teachers can together develop a rubric to evaluate the products. Evaluation Instruments: RAFT Activity (STSE) Choose one: Role Audience Format Topic Anaerobic Bacteria Other anaerobic bacteria Travel Guide Journey through the waste treatment plant Insulin Biotechnology Technician His parents Letter My job: What it is and why it matters Crop Disease Forecasting Expert Farmer E-mail How to prevent potato blight World AntiDoping Agency (WADA) International Olympic Committee (IOC) Recommendatio n Report Olympic Policy on Gene Doping GeneticallyModified food The Public Complaint People don’t trust me – why? Practical and Societal Implications: Microorganisms and Human Disease Harmful microorganisms are the cause of disease and decay that is not due to structural problems or mutations in humans. Many microorganisms also cause disease and decay in crops and farm animals. Examples of familiar human diseases include: Bacteria: salmonella, tetanus, typhoid, cholera, gangrene, bacterial dysentery, diphtheria, tuberculosis, bubonic plague, meningococcal meningitis, pneumococcal pneumonia www.who.org Viruses: rabies, influenza (flu), measles, mumps, polio, rubella (german measles), chicken pox, colds, warts, cold sores Communicable disease surveillance site Fungi: athlete's foot, ringworm http://www.phac-aspc.gc.ca/id-mi/indexeng.php Canadian Public Health Agency Practical and Societal Implications: Biotechnology Industry: Preventing microorganism growth Related Possible Activities: in food handling facilities (Maple Act 5.6.1 Students view a video or visit Leaf meats - contamination) a local factory highlighting the importance Hormone production, Food production Waste management of microbes in development of consumer products - e.g., edible fungi, bacteria converting milk to yoghurt and cheese, moulds adding flavour to Roquefort and Camembert cheeses, antibiotics (zones of inhibition on agar), methanogens to create fuels from manure. From SBI3C Course Profile, www.curriculum.org Practical and Societal Implications: Biotechnology Biotechnology: bacterial vectors are used extensively for gene transfer Viral vectors for medical therapies Probiotics: to replenish gastrointestinal tract Act 5.6.2 Cooperative Learning - Using teacherprovided resources, students investigate the uses and development of microbes in the areas of biotechnology and genetic engineering. This may include bacteria as vectors for cloning and as hosts for protein production (insulin and growth hormone), retroviruses as vectors for gene therapy (ADA and SCID), research on viroids, large scale use of fungicides and pesticides on diversity using a variety of electronic and print media. Students may present their findings. From SBI3C Course Profile, www.curriculum.org Internet Sites Communicable disease surveillance site www.who.org http://www.pbs.org/opb/intimatestrangers/ http://www.peteducation.com/article.cf m?c=18+1803&aid=2956 www.who.int/csr/don/en/ Canadian Public Health Agency http://serendip.brynmawr.edu/sci_edu/waldr on/ http://www.phac-aspc.gc.ca/id-mi/index-eng.php Gizmo: Viral Lytic Cycle Viral Geometry and Structural Diversity film The geometric structures of viruses are beautiful and can be used, along with genomic information, to identify them. (3 minutes 22 seconds) http://www.explorelearning.com/index.cfm?method=cReso urce.dspDetail&ResourceID=448 Animation of Binary Fission: http://highered.mcgrawhill.com/olcweb/cgi/pluginpop.cgi?it=swf::500::500::/sites/dl /free/0073375225/594358/BinaryFission.swf::BinaryFission Actual film of bacteria dividing by binary fission: http://www.hhmi.org/biointeractive/disease/viral_dive rsity.html http://cellsalive.com/qtmovs/ecoli_mov.htm Suggestions for Other Student Labs Is Yeast Alive? Students evaluate whether the little brown grains of yeast obtained from the grocery store are alive by testing for metabolism and growth. Alcoholic Fermentation in Yeast Students learn about the basics of aerobic cellular respiration and alcoholic fermentation and design and carry out experiments to test how variables such as sugar concentration influence the rate of alcoholic fermentation in yeast. In an optional extension activity students can use their yeast mixture to make a small roll of bread. Moldy Jell-O Students design experiments to determine how substrate and environmental conditions influence growth of common molds. All can be found with Student Handouts and Teacher Preparation notes at: http://serendip.brynmawr.edu/sci_edu/wa ldron/ Accommodations Ensure that peer helpers are available when students are working in small groups. Provide handout sheets with specific skill instructions. Help students create data charts into which they record information. Advise special education staff in advance when students are working on major assignments. Record key words on the board when students are expected to make their own notes. Allow students to report verbally to a scribe (teacher or student) who can then help in note making. Permit students a wide range of options for recording and reporting their work to utilize student strengths (e.g., drawings, diagrams, flow charts, concept maps). Timelines may need to be extended to give students more time to process language and put their thoughts into words. Where an activity requires reading, give it in advance to students or provide a selection of materials at different reading levels. From SBI3C Course Profile, www.curriculum.org ESL/ELL Accommodations Where an activity requires reading, give it in advance to students. Permit the use of a translation dictionary on assessments. Have students keep a science Have the teacher-librarian dictionary of terms using identify resources with pictures and first language appropriate reading level when words. research is required. Provide additional time on Advise ESL/ESD staff in assessments for dictionary use advance when significant and processing language. written work is required. From SBI3C Course Profile, www.curriculum.org