DNA: The Genetic Material Chapter 14 2 The Genetic Material Griffith’s conclusion: - information specifying virulence passed from the dead S strain cells into the live R strain cells - Griffith called the transfer of this information transformation 3 The Genetic Material Avery, MacLeod, & McCarty, 1944 repeated Griffith’s experiment using purified cell extracts and discovered: - removal of all protein from the transforming material did not destroy its ability to transform R strain cells - DNA-digesting enzymes destroyed all transforming ability - the transforming material is DNA 4 The Genetic Material Hershey & Chase, 1952 - investigated bacteriophages: viruses that infect bacteria - the bacteriophage was composed of only DNA and protein - they wanted to determine which of these molecules is the genetic material that is injected into the bacteria 5 6 7 8 9 DNA Structure Determining the 3-dimmensional structure of DNA involved the work of a few scientists: – Erwin Chargaff determined that • amount of adenine = amount of thymine • amount of cytosine = amount of guanine This is known as Chargaff’s Rules 10 DNA Structure Rosalind Franklin and Maurice Wilkins – Franklin performed X-ray diffraction studies to identify the 3-D structure – discovered that DNA is helical – discovered that the molecule has a diameter of 2nm and makes a complete turn of the helix every 3.4 nm 11 DNA Structure James Watson and Francis Crick, 1953 – deduced the structure of DNA using evidence from Chargaff, Franklin, and others – proposed a double helix structure 12 DNA Structure The double helix consists of: – 2 sugar-phosphate backbones – nitrogenous bases toward the interior of the molecule – bases form hydrogen bonds with complementary bases on the opposite sugar-phosphate backbone 13 14 DNA Structure The two strands of nucleotides are antiparallel to each other – one is oriented 5’ to 3’, the other 3’ to 5’ The two strands wrap around each other to create the helical shape of the molecule. 15 16 DNA Replication Matthew Meselson & Franklin Stahl, 1958 investigated the process of DNA replication considered 3 possible mechanisms: – conservative model – semiconservative model – dispersive model 17 18 DNA Replication Bacterial cells were grown in a heavy isotope of nitrogen, 15N all the DNA incorporated 15N cells were switched to media containing lighter 14N DNA was extracted from the cells at various time intervals 19 DNA Replication The DNA from different time points was analyzed for ratio of 15N to 14N it contained After 1 round of DNA replication, the DNA consisted of a 14N-15N hybrid molecule After 2 rounds of replication, the DNA contained 2 types of molecules: – half the DNA was 14N-15N hybrid – half the DNA was composed of 14N 20 21 DNA Replication Meselson and Stahl concluded that the mechanism of DNA replication is the semiconservative model. Each strand of DNA acts as a template for the synthesis of a new strand. 22 Prokaryotic DNA Replication The chromosome of a prokaryote is a circular molecule of DNA. Replication begins at one origin of replication and proceeds in both directions around the chromosome. 23 24 Prokaryotic DNA Replication The double helix is unwound by the enzyme helicase DNA polymerase III (pol III) is the main polymerase responsible for the majority of DNA synthesis DNA polymerase III adds nucleotides to the 3’ end of the daughter strand of DNA 25 26 27 Eukaryotic DNA Replication The larger size and complex packaging of eukaryotic chromosomes means they must be replicated from multiple origins of replication. The enzymes of eukaryotic DNA replication are more complex than those of prokaryotic cells. 28 Eukaryotic DNA Replication Synthesizing the ends of the chromosomes is difficult because of the lack of a primer. With each round of DNA replication, the linear eukaryotic chromosome becomes shorter. 29 30 Eukaryotic DNA Replication telomeres – repeated DNA sequence on the ends of eukaryotic chromosomes – produced by telomerase telomerase contains an RNA region that is used as a template so a DNA primer can be produced 31 32 DNA Repair - DNA-damaging agents - repair mechanisms - specific vs. nonspecific mechanisms 33 DNA Repair Mistakes during DNA replication can lead to changes in the DNA sequence and DNA damage. DNA can also be damaged by chemical or physical agents called mutagens. Repair mechanisms may be used to correct these problems. 34 DNA Repair DNA repair mechanisms can be: – specific – targeting a particular type of DNA damage • photorepair of thymine dimers – non-specific – able to repair many different kinds of DNA damage • excision repair to correct damaged or mismatched nitrogenous bases 35 36 37