Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Powerpoint Lecture Outline Human Genetics Concepts and Applications Eighth Edition Ricki Lewis 1-1 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chapter 1 Overview of Genetics 1-2 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genetics • Is a life science • Is the study of inherited variation and traits • Some traits are determined nearly entirely by genes ; most traits have environmental components •Complete set of genetic information characteristic of an organism, including protein-encoding genes and other DNA sequences, constitutes a Genome 1-3 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. The Genome • Is the complete set of genetic information for an organism • It includes: – All of the genes present in an organism and – Other DNA sequences that do not encode genes • Human genome was sequenced in 2000 1-4 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genes • Contain the instructions within the cells for protein production • Genes are the units of heredity • Genes are composed of Deoxyribonucleic Acid (DNA) Figure 1.1 1-5 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genomics • considers many genes at a time , in contrast to the emphasis on single-gene traits that was 20the Century Genetics addresses the more common illnesses influenced by many genes that interact with each other and the environment Compare ourselves to other speciesmyostatin mutation in human, cattle, chickens – very similar 1-6 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genetic Testing • Young people might take genetic tests to prevent, delay, control, or treat symptoms that are likely to develop, or to gain information, perhaps to help decide whether to have children • Example Mackenzie and Laurel 1-7 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Procedure……………. • DNA extracted, cut into pieces , tagged with fluorescent molecules and applied to “DNA chips”, postage sized chips of glass or nylon. Genes are aligned in fixed positions, this device is technically called a “microarray”. A typical microarray bears hundreds or thousands of DNA pieces. • “Expression panel” can determine which genes are turned on or off in the affected cells from the tumor or from blood 1-8 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. DNA Expression microarrays…….. • useful in diagnosing and treating cancer (can show the response to a particular drug, side effects) • Test results always kept confidential 1-9 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Levels of Genetics Figure 1.2 1-10 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Deoxyribonucleic Acid (DNA) A double stranded polymer consisting of a chain of nucleotides • Deoxyribonucleotide components: • Phosphate • Sugar: Deoxyribose • Base: Guanine G Adenine A Thymine T Cytosine C • The sequence of the bases code for the amino acid sequence in a protein 1-11 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Reading1.1, Figure 1 1-12 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Ribonucleic Acid (RNA) • Single stranded polymer of ribonucleotides • Ribonucleotides components: • Phosphate • Sugar: Ribose • Base: Guanine G Adenine A Uracil U Cytosine C • Several types • Uses information on DNA to construct proteins 1-13 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Reading 1.1, Figure 2 1-14 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Proteomics • Considers the types of proteins made in a particular type of cell (24,000 protein encoding genes) • Only 1.5% of the DNA in the human genome encodes protein • Rest includes highly repeated sequences with unknown functions • Includes about 24,000 protein encoding genes • Cataloged in database – Mendelian Inheritance in Man (MIM) – RNA interference(RNA i) actually controls 1-15 which proteins a cell manufactures Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genes • Alleles are variants of genes • mutation causes changes in a DNA sequence • Mutations in sperm or egg cells are passed on to the next generation • May be positive, negative, or neutral • Examples 1-16 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Variations • Polymorphisms(many forms) are variations in the DNA sequence that occur in at least 1% of the population • Single nucleotide polymorphisms (SNPs) are single base sites that differ among (millions identified) individuals and are important as markers • Identification of exclusive SNPs combinations allow the identification of a particular disorder and estimation of disease risk 1-17 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Chromosomes • • • • • Composed of DNA and protein Found in the nucleus of the cell Human cells have 46 chromosomes 22 pairs of autosomes The sex chromosomes X and Y – Females have two X chromosomes – Males have one X and a Y 1-18 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. A Karyotype is a chart of the chromosomes organized by the size of the chromosome pairs. Figure 1.3 1-19 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Cells • All cells with a nucleus in the body contain the same genetic information • Differentiation causes cells to differ in appearance and function. This is controlled by variation in gene expression. • Stem cells are less specialized and can become many different cell types 1-20 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Levels of Organization • • • • • Cells Tissues Organs Organ systems Organism Figure 1.4 1-21 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Individual • The genotype of an individual is the alleles they carry • The phenotype is the visible trait – Dominant alleles are expressed if the individual carries one or two copies of the allele – Recessive alleles are only expressed if the individual carries two copies of the allele 1-22 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. The Family • Inheritance of traits can be observed in families. • A pedigree indicates the structure of a family schematically. Figure 1.4 1-23 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. A Population • Is a group of interbreeding individuals • The gene pool is the alleles in a population • Evolution is the changing allelic frequencies in populations over time. Figure 1.4 1-24 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Evolution • Comparison of DNA sequences indicates the amount of similarity between two species. • 98% of human DNA sequences are shared with chimpanzees. • Humans share genes with mice, fish, fruit flies, yeast, and bacteria. Figure 1.5 1-25 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Review of Genetic Terms Table 1.1 1-26 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Most Genes Do Not Function Alone • Mendelian traits are determined by a single gene • Most traits are multifactorial(complex traits) and not controlled by a single gene. They are influenced by more than one gene and the environment • Some illnesses may occur in different forms: Mendelian, multifactorial, and non-inherited 1-27 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Genes and Disease Risk • Mendelian traits have simple inheritance • Multifactorial traits more complicated – BRCA1 gene and breast cancer – less than 5% cases of breast cancer Ethnic influences as well as environmental Ashkenazim • Knowing risk can help us make good choices 1-28 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Statistics Represent Risks • Risk assessment estimates the degree to which a particular event or situation endangers a population • event is the likelihood of inheriting a particular gene or gene combination • Absolute risk is the probability that an individual will develop a particular condition • Relative risk is the likelihood that an individual from a particular population will develop a condition compared with individuals from another group 1-29 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Applications of Genetics • Forensics Identifying victims, DNA at crime scenes, overturning convictions, adoptions • Rewriting history Thomas Jefferson offspring, the Jewish Lemba • Common ancestry 1-30 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Figure 1.10 1-31 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Applications of Genetics Health care • Prediction of disease – Genetic testing, concerns over privacy • Development of treatments • Family planning 1-32 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Applications of Genetics Agriculture • Biotechnology • Crop and animal breeding • Genetically modified foods 1-33 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Applications of Genetics • Ecology – Metagenomics – sequencing DNA from a targeted habitat – Exaample: Sargasso Sea, an body • Global perspective and human health 1-34