8/16/2013 1 Unit one 2 What is a system? What is an example of a non-living system? How does a malfunction in one part affect the whole system? Give a few examples of how human body systems work together. Name the eleven human body systems 3 Name the eleven human body systems Integumentary system, Skeletal system, Muscular system, Nervous system, Endocrine system, Cardiovascular system, Lymphatic system and immunity, Respiratory system, Digestive system, Urinary system, Reproductive system 4 By donating one pint of blood 4 lives can be saved The human heart beats roughly 35 million times a year It is not possible to tickle yourself because your brain warns the rest of the body and by doing so your brain will ignore this sensation 5 Split into 5 groups Students will randomly draw 2 systems Your group assignment is to focus on and find “Amazing Facts” about those systems 6 Activity 1.1.1. Amazing Facts List the major organs in your systems on your body organizer Discuss top five Amazing Facts for each system Think about how your Primary System can act like a Secondary System Create this Presentation on Your Web Portfolio (Instruction for creating this Web Portfolio is on the Weebly) 1. In what ways do the parts of the human body system work together to carry out a specific function? 2. In what ways do different human body systems work together to complete specific functions? How do you give someone directions? How do you explain location or directions on the human body? Equipment Manikins Post-it Flags Colored Pencils Documents Activity 1.1.2 Adoption Certificates Body Organizer Assemble Manikin Name your Manikin-place your manikin’s name on the base Complete Adoption Certificates Place a picture of the you, your manikin and your partner on your WebPortfoio Always store manikins in there proper place All Manikins look the same now but will soon take on their own personalities. 11 Pair Up with your Manikin Partner Brainstorm Complete Activity 1.1.2 3. How can directional terms and regional terms help describe location in the body? 4. What features of structure and function are common to all humans? The basic processes of the human body unites us as humans, but tiny differences in our ▪ appearance ▪ tissues ▪ cells which make us truly unique 16 Manikins Clay &Clay tools Colored Pencils Microscope Tissue Slides Body System Organizer -Skeletal View Activity 1.2.1 Microscope Resource Sheet Inspiration For windows, go to this link, http://download.inspiration.com/download/wi ndows/inspiration9_win_cd.exe For Macintosh go to this link, http://download.inspiration.com/download/m ac/inspiration9_mac_cd.dmg 14-digit subscription license: 2633D1237J9601 Systems (What makes up systems) Organs (What makes up Organs) Tissues When you think of human identity, what comes to mind At the beginning of the week we discussed systems and organ structures that are common to all humans. Over the year we will be looking at processes that occur in all of our bodies. But what makes us special? Tissues are groups of cells that are similar in structure that work together to perform a specific function. There are four main tissue types: Epithelium Connective tissue Muscle Nervous tissue Epithelium or epithelial tissue, forms the linings, coverings, and glandular tissue of the body. One type of epithelium forms the outer layer of the skin Another type of epithelium lines the air sacs of the lungs Cells in epithelium are packed tightly together to form continuous sheets Connective tissue protects, supports, and binds together other body tissues. Connective tissue is made up of different types of cells in varying amounts of a nonliving substance around the cells, called the matrix. Examples of connective tissue include: Bone Cartilage Adipose tissue (fat) Blood Muscle tissue is specialized to contract and cause movement. There are three main types of muscle tissue: Skeletal muscle Cardiac muscle Smooth muscle Can you guess the location and function of each muscle type? Nervous tissue is composed of specialized cells called neurons that receive and send electrical signals in the body. Nervous tissue responds to stimuli and transmits impulses and together with supporting cells, makes up the brain, spinal cord, and nerves. 1. What are the main types of tissue in the human body? 2. How does the structure of a type of human tissue relate to its function in the body? Pair up Complete Part 1 only Concept Map View prepared slides Link for more slide views http://histology.osumc.edu/histology/Hum anHisto/index.htm# Facial features http://www.youtube.com/watch?v=h_HaJT7 OVIQ&feature=player_detailpage Complete through question 15 Discuss proper use of clay and tools and Manikin Rules Let’s create a face Using Teacher Building Instructions Compare Manikins Adipose tissue- Connective tissue in which fat is stored and which has the cells distended by droplets of fat Connective Tissue- Animal tissue that functions mainly to bind and support other tissues, having a sparse population of cells scattered through an extracellular matrix Epithelial Tissue- Sheets of tightly packed cells that line organs and body cavities Tissue- An integrated group of cells with a common structure and function 3. How does the distribution and structure of different types of tissue in the body contribute to personal identity. 4. “What are the functions of the human skeletal system?” Remember bones are a type connective tissue What do you know about the skeletal system Name this bone Computer with internet Anatomy in Clay Maniken Body System graphic Organizer (Skeletal View) Colored pencils 33 Research the listed bones Label you Manikins Quiz yourself/partner 5. “What are the main bones of the human skeletal system” Review Learning from Bones http://www.nlm.nih.gov/visibleproofs/education/anthro pological/index.html. Located on your activity. Read the Introduction Career Journal- Forensic Anthropologist Forensic Video http://www.youtube.com/watch?v=7cogeHybySI&feature =player_detailpage http://www.youtube.com/watch?v=c8IHPq9VgWI&feature =player_detailpage 6. What is forensic anthropology and how does the field relate to human body systems? 7. How can features of bone be used to determine information about a person’s gender, ethnicity, age, or stature? Each group will use the laminated instruction sheets to take measurements of the bone at each station You will need Project 1.2.3 Student Data Sheet Split into three teams Now split into four groups You will be trying to determine the Age Race Sex Height 2 students at each station to gather measurements of: Skull Femur Pelvis Humerus Tibia We will determine proximal age, height, and race of our victims. Race and Ethnicity Mongoloid (Asian) is an anthropological term for a group that includes Chinese, Koreans, Japanese, Tibetan, Eskimo and some Native Americans. Negroid (Black) is a classification including Sub-Saharan African and Afro-Caribbean peoples and their descendants. Caucasoid (White) refers to people of Anglo or Caucasian descent from Europe, parts of North Africa, Western Asia and India and their descendants. 39 forensic anthropologist, Diane France http://www.youtube.com/watch?v=KcnGybzF hjM watch 10min50sec then again at 34min Discuss findings Compare and discuss differences in male and female bones. Why may the three-race model no longer be accurate Discuss differences between Qualitative and Quantitative Data What is the difference between quantitative and qualitative research? Quantitative research generates numerical data or information that can be converted into numbers. Qualitative Research on the other hand generates non-numerical data. 41 Axial Skeleton- The skeleton of the trunk and head. Appendicular Skeleton- Bones of the limbs and limb girdles that are attached to the axial skeleton Femur- The proximal bone of the hind or lower limb that is the longest and largest bone in the human body, extends from the hip to the knee Forensic Anthropology- The branch of physical anthropology in which anthropological data, criteria, and techniques are used to determine the sex, age, genetic population, or ancestry of skeletal or biological materials in questions of civil or criminal law Humerus-The longest bone of the upper arm or forelimb extending from the shoulder to the elbow 42 Pelvis-A basin-shaped structure in the skeleton of many vertebrates that is formed by the pelvic girdle together with the sacrum and often various coccygeal and caudal vertebrae and that in humans is composed of the two hip bones bounding it on each side and in front while the sacrum and coccyx complete it behind Skull- The skeleton of the head forming a bony case that encloses and protects the brain and chief sense organs and supports the jaws Tibia- The inner and usually larger of the two bones of the leg between the knee and ankle that articulates above with the femur and below with the talus -- called also shinbone 43 Equations In the 1950’s Dr. Trotter developed mathematical formulas that correlated body height to the length of their arm and leg bones. To Complete Parts I - Pair into groups of 2 You will measure your height in cm and then the femur, humerus, and radius bones in cm to use to calculate your height. ( 1 foot = 30.48 cm) Like in criminal investigations an estimated range of height is given. Like 5’9” to 6’2” Use the + and – formulas to get your error value for minimal and maximal height range. 44 Part II You will use a formula specific to Gender and Ethnicity. Then using an Excel file you will develop Your Own Formula. “How well do these equations work?” What equation was most accurate? 45 Revisited 3. How does the distribution and structure of different types of tissue in the body contribute to personal identity. 46 Approximately 1cc of the DNA sample was taken from Skeletal remains and labeled The pieces were stored in EtOH and frozen -20°C Samples were transported to OCTC in refrigerated containers for genetic analysis 47 Agarose A polysaccharide obtained from seaweed that is used as the supporting medium in gel electrophoresis. Biometrics The measurement and analysis of unique physical or behavioral characteristics (as fingerprint or voice patterns) especially as a means of verifying personal identity. Deoxyribonucleic acid (DNA) A double-stranded, helical nucleic acid molecule capable of replicating and determining the inherited structure of a cell’s proteins. 48 Gel electrophoresis The separation of nucleic acids or proteins, on the basis of their size and electrical charge, by measuring their rate of movement through an electrical field in a gel. Restriction enzyme A degradative enzyme that recognizes specific nucleotide sequences and cuts up DNA. Restriction fragment length polymorphisms (RFLPs) Differences in DNA sequence on homologous chromosomes that can result in different patterns of restriction fragment lengths (DNA segments resulting from treatment with restriction enzymes). 49 What level of organization comes below tissues. CELLS Now- Figuratively zoom in on the cell and describe the genetic material found inside the cell. Chromosome Gene Protein DNA 50 List sources of DNA evidence Skin cells Hair Blood Semen Old tissue such as bone but amplified using Polymerase Change Reaction (PCR) 51 How does this genetic material inside the cell relate to overall function of the human body Chromosome ▪ Gene ▪ Protein ▪ DNA 52 Chromosomes: are 23 pairs considered the building blocks of the human body. They are long pieces of DNA found in the center (nucleus) of cells. Chromosomes functions are based on the precise structure of the organelle that carries out that function. 53 A hereditary unit consisting of a sequence of DNA that occupies a specific location on a chromosome and determines a particular characteristic in an organism. Genes are the functional unit of heredity passed from parent to offspring through mitosis. Genes are pieces of DNA, and most genes contain the information for making a specific protein and thus cells 8/16/2013 54 Proteins are constructed from a set of 20 amino acids like long necklaces with different shaped beads. To become active, proteins must twist and fold into their final conformation Proteins that are donut shaped, enable them to form a complete ring around the DNA and regulate the activity of genetic material. This DNA polymerase III cinches around DNA and moves along the strands as it copies the genetic material. 55 DNA is like an architect's blueprint. Think of it as an Owner's Manual for your body. May want to remember: DNA is made of 2 components, Phosphate molecules and deoxyribose sugars. 56 DNA is a unique code of over 3 billion base pairs that provide a genetic blueprint of an individual. It’s function in the human body includes coding for proteins. It holds the instructions of an organism's development and reproduction therefore its survival. It also transfers genetic messages to all other cells in the human body. 57 1. What is the structure and function of DNA 2. How does DNA differ from person to person 3. What role does DNA play in our Identity 58 taking up too much sample with the micropipettor, taking up air in addition to the sample, not completely expelling the sample, sucking the sample out of the well, poking the pipette tip through the bottom of the gel well. 59 Place a new tip on the micropipettor, being careful to not touch the tip to any surface. Depress the plunger to the first stop and hold it in this position. Dip the tip of the micropipettor into the top of the solution to be transferred. Gradually release the plunger and draw the fluid into the tip, making sure to keep the tip in the solution. Slide the pipet tip out along the inside wall of the reagent tube to dislodge any excess droplets adhering to the outside of the tip. Check to make sure there are no air bubbles in the sample in the tip. If there are air bubbles, expel the sample using the directions below and restart procedure. 60 Insert the tip of the micropipettor into the area in which you want to expel the liquid. Slowly depress the plunger to the first stop to expel the sample and continue to depress the plunger to the second stop to ensure all of the liquid is expelled. Hold the plunger in the depressed position. Slide the micropipettor out with the plunger depressed. Do not release the plunger from the depressed position to avoid sucking any liquid back into the tip. Once the tip is out of the liquid, release the plunger. Eject the tip into the proper disposal area by pressing down on the tip-ejector button 61 Set fake gel into casting trey Secure casting trey into chamber well- line up the notch Pour water into chamber until it fills BOTH ends and covers gel completely Micropipette Secure tip until “click” Set measurement and pick-up 20-35 uL of practice loading dye Don’t push all the way down 62 Practice filling each well Don’t poke holes in gel Don’t create air bubbles Keep the plunger depressed until after you have raised the micropipettor away from the gel 63 A Biochemical technique used to amplify the number of copies of a specific region of DNA generating thousands to millions of copies of a particular DNA sequence in order to be adequately tested. Named after the enzyme, polymerase, which copies DNA in cells. It’s a chain reaction because multiple events occur in succession, over and over again in the same sequential order. Each time the series of events is completed, one cycle has been completed. Completed in a thermal cycler in a lab. What are some of the uses: Cloning Diagnosis of hereditary diseases Paternity testing Diagnosis of infectious diseases Identification of finger prints Forensic sciences 65 1. 2. 3. 4. DNA is obtained from the skeletal remain Gene is amplified by PCR DNA is cut in specific places by the use of restriction enzymes. The restriction enzyme Restriction enzymes recognizes specific nucleotide sequences are derived from Bacteria and cuts DNA The process where DNA can is separated according to size and electrical charge by applying an electric current to them. The current forces the molecules through pores in a thin layer of gel. DNA is negatively charged so it runs toward the positive pole A B Restriction Enzymes Polymorphism = Difference in length of fragments Restriction Enzymes are derived from bacteria with the ability to cut DNA from invading organisms such as a viruses, before the virus takes control of the cell To visualize the DNA fragments and sort them according to size DNA samples are loaded into a gel and exposed to electrical currents Fragments run through the gel at different rates smaller = faster 69 Gloves throughout Lab Power source Chamber & casting trey Agarose gel with wells Combs TAE Buffer Distilled H20 Micropipette and tips Dye Light box DNA RFLP Samples 70 8/16/2013 71 Activity 1.3.1. Student Response Sheet Student read Introduction 73 1. Obtain 4 micro-centrifuge tubes 2. Label tubes 1-4 Very Important: Note the content of each tube in your lab journal. You will need to know what is in each tube. Don’t get them mixed up!!! 3.Dispense Sterile Water into 4 tubes. 4 Dispense DNA and Enzymes into 4 tubes. 5. Incubate in 37 ̊ water bath X 30 min. 6. Begin Student Resource Sheet. 74 1. Obtain your 4 tubes 2. Heat samples plus the DNA marker and DNA extracted from bone for 2 min at 65 degrees C 3. While cooling practice loading gels 4. Draw diagram in lab journal Clearly indicating which sample is in each well. 75 Don’t poke through the agarose Keep plunger depressed until after you have raised the micropipetter . To prevent the reuptake of sample out of the well, remember to keep the plunger depressed until you completely lift the micropipetter out of the gel Be sure the voltage is set at 150 and the timer is set for 15 minutes 76 Check polarity! Be sure the DNA sample is at top of the negative pole (black) and will run down toward the positive Alarm will sound after 15 minutes…check back every 2-5m if incomplete Create staining solution while you wait: 10mL of 10X Flashblue concentrate + 90mL distilled water Turn off the power supply when the dye is near the bottom edge of the gel Be careful to not allow the dye to run off the edge of the gel 77 1. 2. 3. 4. 5. Place gel in tray, and tray in chamber. Be sure the wells are at the negative end of the gel and the trey is secure in the notch Fill with TAE Buffer this time, cover gel completely Fill the wells with the corresponding sample Copy table in notes!!!! 78 If the polarity is backwards, the DNA will migrate out of the well and off the short end of the gel. If the mistake is caught in time, the polarity can be reversed and the DNA will migrate back into the well and then through the longer portion of the gel. 79 The DNA fragments are then stained with a dye and can be observed as lines or bands in the gel when view on a light box. 80 Often the DNA fragment bands can be observed directly after electrophoresis without further treatment. If the bands are faint or appear to be missing, the gel can be soaked in the diluted Carolina Blue dye for 30 minutes and then washed with distilled water 81 8/16/2013 82 Don’t Go Past Here 83 You will actually find that the gel results show that both of the missing persons match the DNA fingerprint of the DNA from bone digested with Enzyme 1 NOTE that Lane D and F are the same. (see the example gel picture below). You can see how this can happen even if the DNA sequences are different. 84 You will have to look to the results for Enzyme 2 to make their final conclusions regarding identity. Gel results show that when using a second restriction enzyme on the same DNA, only one RFLP matches that from the bone sample. 85 Lane 1 Standard DNA Marker Lane 2 DNA from Bone cut w Enzyme 1 Lane 3 DNA from bone cut w Enzyme 2 Lane 4 Missing person 1 w Enzyme 1 Lane 5 Missing person 1 w Enzyme 2 Lane 6 Missing person 2/Enzyme 1 Lane 7 Missing person 2/Enzyme 2 86 4. How can tools of molecular biology be used to compare the DNA of 2 individuals? 5. What are restriction enzymes? 6. What are restriction fragment length polymorphisms? 87 Gel Electrophoresis Virtual Lab http://learn.genetics.utah.edu/content/lab/gel DNA Interactive: Gel Electrophoresis http:www.dnai.org/text/mediashowcase/index2.ht ml?id=1014 88 7. What is gel electrophoresis and how can the results of this technique be interpreted? 89 Analyze the DNA Discuss results and conclusions Conclusion Questions 90 Introduces Activity 1.3.2 Careers in Identity. Career Journal for Forensic Anthropologist Distribute the Biomedical Sciences Documentation Protocol and review documentation of their sources. Distribute Rubric and go over grading Students complete Activity 1.3.2 individually. 91 Gives your work credibility Allows reader to look up sources to obtain more information Citation gives credit to original author. Source is documented in 2 places in APA style. 1st, In the text and 2nd at the end of document in the reference list. 92 In this project you will be a team of 3 to design a security plan using biometrics for your new Client. Using: Power Point Presentation Oral Presentation Answering any questions Convince you client to buy Brain storm: What body systems are involved in Biometric Techniques. 93 8. How can the field of biometrics be used to verify and protect identity? 94 Discuss Ethical Issues in biometrics and the use of biology in identity. Discuss how DNA can be used in biometrics. Debate how close we are to Identifying people in an instant using DNA sample. 95