Spektrophotometry Method Characterization 1. Aims - Determining KmnO4 concentration - Charakterisation of spectrophotometry method 2. Introduction 2.1. Spectrophotometer The overall design If you pass white light through a coloured substance, some of the light gets absorbed. A solution containing hydrated copper(II) ions, for example, looks pale blue because the solution absorbs light from the red end of the spectrum. The remaining wavelengths in the light combine in the eye and brain to give the appearance of cyan (pale blue). Some colourless substances also absorb light - but in the ultra-violet region. Since we can't see UV light, we don't notice this absorption. Different substances absorb different wavelengths of light, and this can be used to help to identify the substance - the presence of particular metal ions, for example, or of particular functional groups in organic compounds. The amount of absorption is also dependent on the concentration of the substance if it is in solution. Measurement of the amount of absorption can be used to find concentrations of very dilute solutions. An absorption spectrometer measures the way that the light absorbed by a compound varies across the UV and visible spectrum. A simple double beam spectrometer We'll start with the full diagram, and then explain exactly what is going on at each stage. IMPORTANT! The colour-coding of the light beams through the spectrometer is NOT to show that some light is red or blue or green. The colours are simply to emphasise the two different paths that light can take through the device. Where the light is shown as a blue line, this is the path that it will always take. Where it is shown red or green, it will go either one way or the other - depending on how it strikes the rotating disc (see below). The light source You need a light source which gives the entire visible spectrum plus the near ultra-violet so that you are covering the range from about 200 nm to about 800 nm. (This extends slightly into the near infra-red as well.) Note: "Near UV" and "near IR" simply means the parts of the UV and IR spectra which are close to the visible spectrum. If you aren't happy about how the various types of electromagnetic radiation relate to each other, follow this link before you go on. Use the BACK button on your browser to return here later. You can't get this range of wavelengths from a single lamp, and so a combination of two is used - a deuterium lamp for the UV part of the spectrum, and a tungsten / halogen lamp for the visible part. Note: A deuterium lamp contains deuterium gas under low pressure subjected to a high voltage. It produces a continuous spectrum in the part of the UV spectrum we are interested in. The combined output of these two bulbs is focussed on to a diffraction grating. The diffraction grating and the slit You are probably familiar with the way that a prism splits light into its component colours. A diffraction grating does the same job, but more efficiently. The blue arrows show the way the various wavelengths of the light are sent off in different directions. The slit only allows light of a very narrow range of wavelengths through into the rest of the spectrometer. By gradually rotating the diffraction grating, you can allow light from the whole spectrum (a tiny part of the range at a time) through into the rest of the instrument. The rotating discs This is the clever bit! Each disc is made up of a number of different segments. Those in the machine we are describing have three different sections - other designs may have a different number. The light coming from the diffraction grating and slit will hit the rotating disc and one of three things can happen. 1. If it hits the transparent section, it will go straight through and pass through the cell containing the sample. It is then bounced by a mirror onto a second rotating disc. This disc is rotating such that when the light arrives from the first disc, it meets the mirrored section of the second disc. That bounces it onto the detector. It is following the red path in the diagram: 2. If the original beam of light from the slit hits the mirrored section of the first rotating disc, it is bounced down along the green path. After the mirror, it passes through a reference cell (more about that later). Finally the light gets to the second disc which is rotating in such a way that it meets the transparent section. It goes straight through to the detector. 3. If the light meets the first disc at the black section, it is blocked and for a very short while no light passes through the spectrometer. This just allows the computer to make allowance for any current generated by the detector in the absence of any light. The sample and reference cells These are small rectangular glass or quartz containers. They are often designed so that the light beam travels a distance of 1 cm through the contents. The sample cell contains a solution of the substance you are testing usually very dilute. The solvent is chosen so that it doesn't absorb any significant amount of light in the wavelength range we are interested in (200 - 800 nm). The reference cell just contains the pure solvent. The detector and computer The detector converts the incoming light into a current. The higher the current, the greater the intensity of the light. For each wavelength of light passing through the spectrometer, the intensity of the light passing through the reference cell is measured. This is usually referred to as Io - that's I for Intensity. The intensity of the light passing through the sample cell is also measured for that wavelength - given the symbol, I. If I is less than Io, then obviously the sample has absorbed some of the light. A simple bit of maths is then done in the computer to convert this into something called the absorbance of the sample - given the symbol, A. For reasons which will become clearer when we do a bit of theory on another page, the relationship between A and the two intensities is given by: On most of the diagrams you will come across, the absorbance ranges from 0 to 1, but it can go higher than that. An absorbance of 0 at some wavelength means that no light of that particular wavelength has been absorbed. The intensities of the sample and reference beam are both the same, so the ratio Io/I is 1. Log10 of 1 is zero. An absorbance of 1 happens when 90% of the light at that wavelength has been absorbed - which means that the intensity is 10% of what it would otherwise be. In that case, Io/I is 100/I0 (=10) and log10 of 10 is 1. Note: If you don't feel comfortable with logarithms, don't worry about it. Just accept that an absorbance scale often runs from zero to 1, but could go higher than that in extreme cases (in other words where more than 90% of a wavelength of light is absorbed). The chart recorder Chart recorders usually plot absorbance against wavelength. The output might look like this: Spectrometer Specifications: The following table is an example of spectrometer Specifications Specifications Item Description Setting wavelength range 190 1100nm Measurement wavelength 190 900nm (up to 1100nm with special detector) range Wavelength accuracy 0.3nm with auto wavelength correction included Wavelength repeatability 0.1nm Wavelength scanning speed Wavelength slew rate: about 3200nm/min Wavelength scan rate: about 900 160nm/min Monitor scan rate: about 2500nm/min Wavelength setting At 1nm units for scan start and scan end wavelengths, and 0.1nm units for other wavelengths Lamp interchange wavelength Auto switching synchronized with wavelength, switching range selectable between 282 393nm (0.1nm units) Spectral bandwidth 6-step switching among 0.1/0.2/0.5/1/2/5nm Response Optimum response speed automatically set depending on bandwidth, minimum 0.1sec Resolution 0.1nm Stray light UV-2450 UV-2550 Less than 0.015% Less than 0.0003% (220nm, NaI 10g/L solution) Less than 0.015% Less than 0.0003% (340nm, UV-39 filter) Photometric system Double-beam, direct ratio system with dynode feedback Photometric modes Absorbance (Abs.), transmittance (%), reflectance (%), energy (E) Photometric range Absorbance: -4 5 Abs Transmittance, reflectance: 0.0 999.9% Recording range Absorbance: -9.999 9.999 Abs Transmittance, reflectance: -999.9 999.9% Photometric accuracy 0.002 Abs (0 0.5 Abs) 0.004 Abs (0.5 1.0 Abs)}Tested with NIST 930D standard filter 0.3%T (0 100% T) * If the detector has been replaced with a near infrared sensitive photomultiplier, the standard optical specifications of the above instrument will not be satisfied. Item Description Photometric repeatability 0.001 Abs (0 ~ 0.5 Abs) 0.002 Abs (0.5 ~ 1.0 Abs) 0.1%T Baseline flatness 0.001 Abs (excluding noise, using 2nm slit, and slow wavelength scanning speed) Baseline correction Auto correction using PC (Stored baseline is automatically loaded when power is switched on, re-correction is possible) Drift 0.0004Abs/h (after power is on for 2 hours) Temperature and humidity requirements 15 ~ 35°C, 45 ~ 80% (no condensation, less than 70% above 30°C) Light source 50W halogen lamp (2,000 hours life), deuterium lamp (socket type), light source auto position adjustment built in Monochromator UV-2450 Single monochromator, high-performance blazed holographic grating in aberrationcorrected Czerny-Turner mounting UV-2550 Grating/Grating type double monochromator, Pre-monochromator: double-blazed holographic grating Main monochromator: high-performance blazed holographic grating in aberration-corrected Czerny-Turner mounting Detector Photomultiplier R-928 Sample compartment Internal dimensions: 150W x 260D x 120H (mm) Distance between light beams: 100mm Maximum light path length of cell: 100 mm Power requirements AC100, 120, 220, 240 V, switch selectable 50/60Hz; 250 VA Dimensions 570W x 660D x 275H (mm) Weight About 36 kg (PC and printer are not included.) UVProbe Software Specifications Operating System Windows XP Pro/2000 Pro Instruments UV-1601 Series, UV-2401/2501 Series Data Acquisition Modes Spectrum, Kinetics and Photometric General Multitasking (Possible to execute data processing while measurement is being executed.) Customizable measurement screen layout (wavelengths, data display font and font size, colors, displayed number of rows) GLP/GMP compliant (security, history) Real time concentration display Spectrum Mode Comparison of multiple spectra/relative processing Save all processed data with original data set including a history of all manipulations Spectrum enlargement/shrinking, auto scale and Undo/Redo of these operations Data Processing in Spectrum Mode Photometric (Quantitation) Mode Annotation on spectrum screen Normalization, Point Pick, peak/valley detection, area calculation Transformations: 1st - 4th derivatives, smoothing, reciprocal, square root, natural log, logarithm power, Abs. to %T conversion, and exponential, KubelkaMunk conversion Ensemble averaging, interpolation, data set and constants arithmetic (between spectra, between spectra and constants) Single wavelength, multi wavelength (includes 1, 2 or 3 wavelengths), spectrum quantitation (peak, maximum, minimum, area, etc. for specified wavelength ranges) Multi-point, single point, K-factor calibration curves (1st, 2nd, 3rd order function fits, pass-through-zero specification) Photometric processing with user-defined functions (+, -, x, , Log, Exp, etc. functions, including factors) Weight correction, dilution factor correction, and other corrections using factors Averaging of repeat measurement data Simultaneous display of standard table, unknown table and calibration curves Kinetics (Time Course) Mode Display of Pass/Fail indications Comparison/relative data processing of multiple time course data Single or double wavelength measurement (difference or ratio) Simultaneous display of time course data, enzyme table and graphs Enzyme kinetics calculation (for single or multicell) Michaelis-Menten calculations and graph creation (Michaelis-Menten, Lineweaver-Burk, Hanes, Woolf, Eadie-Hofstee), Dixon plot, Hill plot Unitary management of sample information including original data, sample weight and dilution factors, etc. Event recording such as addition of reagents during measurement Time course spectrum data processing (same as in spectrum data processing) Report Generator Preview and print functions for customized formats Layout and editing of templates Quick printing using report templates Multi-page printout support Insert date, time, text, and drawing objects including lines, circles and rectangles Insert spectrum and quantitation data, method and history Headers and footers easily inserted 2.2. Specify graph line thickness (as in all modulules), font style and size The Lamber – Beer Law A. Equations Diagram of Beer–Lambert absorption of a beam of light as it travels through a cuvette of width ℓ. The law states that there is a logarithmic dependence between the transmission (or transmissivity), T, of light through a substance and the product of the absorption coefficient of the substance, α, and the distance the light travels through the material (i.e. the path length), ℓ. The absorption coefficient can, in turn, be written as a product of either a molar absorptivity of the absorber, ε, and the concentration c of absorbing species in the material, or an absorption cross section, σ, and the (number) density N of absorbers. For liquids, these relations are usually written as whereas for gases, and in particular among physicists and for spectroscopy and spectrophotometry, they are normally written where I0 and I are the intensity (or power) of the incident light and the transmitted light, respectively; σ is cross section of light absorption by a single particle and N is the density (number per unit volume) of absorbing particles. The difference between the use of base 10 and base e is purely conventional, requiring a multiplicative constant to convert between them. The transmission (or transmissivity) is expressed in terms of an absorbance which for liquids is defined as whereas for gases, it is usually defined as This implies that the absorbance becomes linear with the concentration (or number density of absorbers) according to and for the two cases, respectively. Thus, if the path length and the molar absorptivity (or the absorption cross section) are known and the absorbance is measured, the concentration of the substance (or the number density of absorbers) can be deduced. Although several of the expressions above often are used as Beer–Lambert law, the name should strictly speaking only be associated with the latter two. The reason is that historically, the Lambert law states that absorption is proportional to the light path length, whereas the Beer law states that absorption is proportional to the concentration of absorbing species in the material.[1] If the concentration is expressed as a mole fraction i.e. a dimensionless fraction, the molar absorptivity (ε) takes the same dimension as the absorption coefficient, i.e. reciprocal length (e.g. m−1). However, if the concentration is expressed in moles per unit volume, the molar absorptivity (ε) is used in L·mol−1·cm−1, or sometimes in converted SI units of m2·mol−1. The absorption coefficient α' is one of many ways to describe the absorption of electromagnetic waves. For the others, and their interrelationships, see the article: Mathematical descriptions of opacity. For example, α' can be expressed in terms of the imaginary part of the refractive index, κ, and the wavelength of the light (in free space), λ0, according to In molecular absorption spectrometry, the absorption cross section σ is expressed in terms of a linestrength, S, and an (area-normalized) lineshape function, Φ. The frequency scale in molecular spectroscopy is often in cm−1, wherefore the lineshape function is expressed in units of 1/cm−1, which can look funny but is strictly correct. Since N is given as a number density in units of 1/cm3, the linestrength is often given in units of cm2cm−1/molecule. A typical linestrength in one of the vibrational overtone bands of smaller molecules, e.g. around 1.5 μm in CO or CO2, is around 10−23 cm2cm−1, although it can be larger for species with strong transitions, e.g. C2H2. The linestrengths of various transitions can be found in large databases, e.g. HITRAN. The lineshape function often takes a value around a few 1/cm−, up to around 10/cm−1 under low pressure conditions, when the transition is Doppler broadened, and below this under atmospheric pressure conditions, when the transition is collision broadened. It has also become commonplace to express the linestrength in units of cm−2/atm since then the concentration is given in terms of a pressure in units of atm. A typical linestrength is then often in the order of 10−3 cm−2/atm. Under these conditions, the detectability of a given technique is often quoted in terms of ppm•m. The fact that there are two commensurate definitions of absorbance (in base 10 or e) implies that the absorbance and the absorption coefficient for the cases with gases, A' and α', are ln 10 (approximately 2.3) times as large as the corresponding values for liquids, i.e. A and α, respectively. Therefore, care must be taken when interpreting data that the correct form of the law is used. The law tends to break down at very high concentrations, especially if the material is highly scattering. If the light is especially intense, nonlinear optical processes can also cause variances. B. Derivation The derivation is quite simple in concept. There are many details, so think of this first paragraph as a conceptual overview. Divide the absorbing sample into thin slices that are perpendicular to the beam of light. The light that emerges from a slice is slightly less intense than the light that entered because some of the photons have run into molecules in the sample and did not make it to the other side. For most cases where measurements of absorption are needed, a vast majority of the light entering the slice leaves without being absorbed. Because the physical description of the problem is in terms of differences--intensity before and after light passes through the slice---we can easily write an ordinary differential equation model for absorption. The difference in intensity due to the slice of absorbing material dI is reduced; leaving the slice, it is a fraction β of the light entering the slice I. The thickness of the slice is dz, which scales the amount of absorption (thin slice does not absorb much light but a thick slice absorbs a lot). In symbols, dI = βIdz, or dI / dz = βI. This conceptual overview uses β to describe how much light is absorbed. All we can say about the value of this constant is that it will be different for each material. Also, its values should be constrained between -1 and 0. The following paragraphs cover the meaning of this constant and the whole derivation in much greater detail. Assume that particles may be described as having an absorption cross section (i.e. area), σ, perpendicular to the path of light through a solution, such that a photon of light is absorbed if it strikes the particle, and is transmitted if it does not. Define z as an axis parallel to the direction that photons of light are moving, and A and dz as the area and thickness (along the z axis) of a 3-dimensional slab of space through which light is passing. We assume that dz is sufficiently small that one particle in the slab cannot obscure another particle in the slab when viewed along the z direction. The concentration of particles in the slab is represented by N. It follows that the fraction of photons absorbed when passing through this slab is equal to the total opaque area of the particles in the slab, σAN dz, divided by the area of the slab A, which yields σN dz. Expressing the number of photons absorbed by the slab as dIz, and the total number of photons incident on the slab as Iz, the fraction of photons absorbed by the slab is given by Note that because there are fewer photons which pass through the slab than are incident on it, dIz is actually negative (It is proportional in magnitude to the number of photons absorbed). The solution to this simple differential equation is obtained by integrating both sides to obtain Iz as a function of z The difference of intensity for a slab of real thickness ℓ is I0 at z = 0, and I1 at z = ℓ. Using the previous equation, the difference in intensity can be written as, rearranging and exponentiating yields, This implies that and The derivation assumes that every absorbing particle behaves independently with respect to the light and is not affected by other particles. Error is introduced when particles are lying along the same optical path such that some particles are in the shadow of others. This occurs in highly concentrated solutions. In practice, when large absorption values are measured, dilution is required to achieve accurate results. Measurements of absorption in the range of I1 / I0 = 0.1 to 1 are less affected by shadowing than other sources of random error. In this range, the ODE model developed above is a good approximation; measurements of absorption in this range are linearly related to concentration. At higher absorbances, concentrations will be underestimated due to this shadow effect unless one employs a more sophisticated model that describes the nonlinear relationship between absorption and concentration. C. A calibration curve In analytical chemistry, a calibration curve is a general method for determining the concentration of a substance in an unknown sample by comparing the unknown to a set of standard samples of known concentration.[1] A calibration curve is one approach to the problem of instrument calibration; other approaches may mix the standard into the unknown, giving an internal standard. The calibration curve is a plot of how the instrumental response, the so-called analytical signal, changes with the concentration of the analyte (the substance to be measured). The operator prepares a series of standards across a range of concentrations near the expected concentration of analyte in the unknown. The concentrations of the standards must lie within the working range of the technique (instrumentation) they are using (see figure).[2] Analyzing each of these standards using the chosen technique will produce a series of measurements. For most analyses a plot of instrument response vs. analyte concentration will show a linear relationship. The operator can measure the response of the unknown and, using the calibration curve, can interpolate to find the concentration of analyte. The data - the concentrations of the analyte and the instrument response for each standard - can be fit to a straight line, using linear regression analysis. This yields a model described by the equation y = mx + y0, where y is the instrument response, m represents the sensitivity, and y0 is a constant that describes the background. The analyte concentration (x) of unknown samples may be calculated from this equation. Many different variables can be used as the analytical signal. For instance, chromium (III) might be measured using a chemiluminescence method, in an instrument that contains a photomultiplier tube (PMT) as the detector. The detector converts the light produced by the sample into a voltage, which increases with intensity of light. The amount of light measured is the analytical signal. Most analytical techniques use a calibration curve. There are a number of advantages to this approach. First, the calibration curve provides a reliable way to calculate the uncertainty of the concentration calculated from the calibration curve (using the statistics of the least squares line fit to the data). [3] Second, the calibration curve provides data on an empirical relationship. The mechanism for the instrument's response to the analyte may be predicted or understood according to some theoretical model, but most such models have limited value for real samples. (Instrumental response is usually highly dependent on the condition of the analyte, solvents used and impurities it may contain; it could also be affected by external factors such as pressure and temperature.) Many theoretical relationships, such as fluorescence, require the determination of an instrumental constant anyway, by analysis of one or more reference standards; a calibration curve is a convenient extension of this approach. The calibration curve for a particular analyte in a particular (type of) sample provides the empirical relationship needed for those particular measurements. The chief disadvantages are that the standards require a supply of the analyte material, preferably of high purity and in known concentration. (Some analytes - e.g., particular proteins - are extremely difficult to obtain pure in sufficient quantity.) Figure 1. An example of a calibration curve D. Error in Calibration Curve Results As expected, the concentration of the unknown will have some error which can be calculated from the formula below.[4][5] This formula assumes that a linear relationship is observed for all the standards. It is important to note that the error in the concentration will be minimal if the signal from the unknown lies in the middle of the signals of all the standards (the term goes to zero if ) sy is the standard deviation in the residuals Linear least squares#Residual values and correlation m is the slope of the line b is the y-intercept of the line n is the number standards k is the number of replicate unknowns yunknown is the measurement of the unknown is the average measurement of the standards xi are the concentrations of the standards is the average concentration of the standards 3. Instrumentation Set Up Spectrometer UV/Vis 1601 PC KmnO4 Solution 4. PROSEDURE A. 1. KmnO4 Solution preparations in Molar; 2.10-5, 4.10-5, 6.10-5, 8.10-5, 10.10-5, 15.10-5, 20.10-5 , 25.10-5, 30.10-5 M 2. Blank refernce (only solvent) 3. Sample solution (Given by assistent) B. Scanning 1. Switch on the spectrometer, follows the intruction manual (laboratory) 2. Use setup repetation to 3 times 3. Scan the respon power of spectrometer from 199 to 1100 nm, follows the instruction manual (laboratory) 4. Scan each KmnO4 Solutions from 250 up to 700 nm 5. Read out the wavelength of each shown peak 5. Read Absorbance at 2 peaks shown in the spectrograph 6. Scan the sample from instructur wit same previous prosedure C. Analysis 1. Construct the calibration curves A vs C from the above measured prosedures 2. Determine the concentration of given KmnO4 sample D. Analysis of Method 1. Plot each peak wavelength, and determine the wavelength reading repeatibility of spectrometer 2. From the calibration curve, determine: a. Linierity of curve b. the zero concentration c. plot the concentration error vs A (c/C vs A), give comment from your plot