Publications by members of COST Action 859 and related to the activities of the Action (February 2006) Aarts MGM and Fiers MWEJ (2003) What drives plant stress genes? Trends Plant Sci. 8, 99102. Abadía J, Tagliavini M, Grasa R, Belkhodja R, Abadía A, Sanz M, Faria EA, Tsipouridis C and Marangoni B (2000) Using the flower Fe concentration for estimating crop chlorosis status in fruit tree orchards. A summary report. Journal of Plant Nutrition 23, 2023-2033. Abadía J, López-Millán AF, Rombolà AD and Abadía A (2002) Organic acids and Fe deficiency: A review. Plant and Soil 241, 75-86. Abadía J, Álvarez-Fernández A, Rombolà AD, Sanz M, Tagliavini M and Abadía A (2004) Technologies for the diagnosis and remediation of Fe deficiency. Soil Science and Plant Nutrition 50, 965-971. Abdel-Ghany SE, Burkhead JL, Gogolin KA, Andrés-Colás N, Bodecker JR, Puig S, Peñarrubia L and Pilon M (2005) AtCCS is a functional homolog of the yeast copper chaperone Ccs1/Lys7. FEBS Lett. 579, 2307-2312. Abruzzese A, Rivetta A, Lucchini G, Gambale F, Paganetto A, Cocucci M and Sacchi GA (2001) Chelate-assisted phytoextraction of lead from soil. Minerva Biotecnologica 13, 103-109. Adams ML, Zhao FJ, McGrath SP, Nicholson FA and Sinclair AH (2001) Trace elements in UK wheat: from selenium deficiency to heavy metal contamination by cadmium and lead. Aspects of Applied Biology 64, 209-216. Adams ML, Lombi E, Zhao FJ and McGrath SP (2002) Evidence of low selenium concentrations in U.K. breadmaking wheat grain. Journal of the Science of Food and Agriculture 82, 1160-1165. Adams ML, Chaudri AM, Rousseau I and McGrath SP (2003) A practical evaluation of microwave and conventional wet digestion techniques for the determination of Cd, Cu and Zn in wheat grain. International Journal of Environmental Analytical Chemistry 83, 307-314. Adams ML, Zhao FJ, McGrath SP, Nicholson FA and Chambers BJ (2004) Predicting cadmium concentrations in wheat and barley grain using soil properties. Journal of Environmental Quality 33, 532-541. Adriaensen K, van der Lelie D, Van Laere A, Vangronsveld J and Colpaert JV (2003) A zincadapted fungus protects pines from zinc stress. New Phytologist 161, 549-555. Adriaensen K, Vralstad T, Noben JP, Vangronsveld J and Colpaert JV (2005) Copper-adapted Suillus luteus, a symbiotic solution for pines colonizing Cu mine spoils. Applied and Environmental Microbiology 71, 7279-7284. Adriano DC, Wenzel WW, Vangronsveld J and Bolan NS (2004) Role of assisted natural remediation in environmental cleanup. Geoderma 122, 121-142. Adriano DC, Bolan NS, Vangronsveld J and Wenzel WW (2005) Heavy metals. In: Encyclopedia of Soils in the Environment, edited by D. Hillel. Elsevier Academic Press. Amsterdam, The Netherlands, pp. 175-182. Ager FJ, Ynsa MD, Domínguez-Solís JR, Gotor C, Respaldiza MA and Romero LC (2002) Cadmium localization and quantification in the plant Arabidopsis thaliana using Micro-PIXE. Nucl. Instr. and Meth.in Phys. Res. B. 189, 494-498. 1 Ager FJ, Ynsa MD, Domínguez-Solís JR, López-Martín MC, Gotor C and Romero LC (2003) Nuclear microprobe analysis of Arabidopsis thaliana leaves. Nucl. Instr. and Meth.in Phys. Res. B 210, 401-406. Agrimonti C, Visioli G and Marmiroli N (2000) In vitro and in silico analysis of two genes (A21 and G1-1) differentially regulated during dormancy and sprouting in potato tubers. Potato Research 43, 325-333. Aina R, Sgorbati S, Santagostino A, Labra M, Ghiani A and Citterio S (2004) Specific hypomethylation of DNA is induced by heavy metals in white clover and industrial hemp. Physiologia Plantarum 121, 472-480. Ait Ali N, Bernal MP and Ater M (2002) Tolerance and bioaccumulation of copper in Phragmites australis and Zea mays. Plant and Soil 239, 103-111. Ait Ali N, Bernal MP and Ater M (2004) Tolerance and bioaccumulation of cadmium by Phragmites australis grown in the presence of elevated concentrations of cadmium, copper, and zinc. Aquatic Botany 80, 163-176. Aktoprakligil D and Memon AR (2001) Use of mRNA differential display technique in plant biology. Biotechnol. and Biotechnol. Eq. 15, 11-13. Alcántara E, Barra R, Benlloch M, Ginhas A, Jorrín J, López JA, Lora A, Ojeda MA, Puig M, Pujadas A, Requejo R, Romera FJ, Ruso J, Sancho ED, Shilev S and Tena M (2001) Phytoremediation of a metal contaminated area in Southern Spain. Minerva Biotecnologica 13, 33-35. Alcántara E, Barra R, Benlloch M, Ginhas A, Jorrin J, López JA, Lora A, Ojeda MA, Puig M, Pujadas A, Requejo R, Romera J, Ruso J, Sancho ED, Shilev S and Tena M (2001) EMIR-UCO, a multidisciplinary approach on a multicomponent toxic spill (Aznalcóllar, Spain). Proc. First Eur. Biorem. Conf, pp. 485-488. Alkorta I, Aizpurua A, Riga P, Albizu I, Amézaga I and Garbisu C (2003) Soil enzyme activities as biological indicators of soil health. Reviews on Environmental Health 18, 65-73. Alkorta I, Albizu I and Garbisu C (2003) Biodiversity and agroecosystems. Biodiversity and Conservation 12, 2521-2522. Alkorta I, Amezaga I, Albizu I, Aizpurua A, Onaindia M, Buchner V and Garbisu C (2003) Molecular microbial biodiversity assessment: a biological indicator of soil health. Reviews on Environmental Health 18, 131-151. Alkorta I, Albizu I, Amezaga I, Onaindia M and Garbisu C (2004) The ladder towards the understanding of the concept of agroecosystem health. Reviews on Environmental Health 19, 141-159. Alkorta I, Becerril JM, Hernández-Allica J, Amezaga I, Albizu I, Onaindia M and Garbisu C (2004) Chelate-enhanced phytoextraction of soils polluted with heavy metals. Re/Views in Environmental Science and Bio/Technology 3, 55-70. Alkorta I, Becerril JM, Hernández-Allica J, Amezaga I, Albizu I and Garbisu C (2004) Recent findings on the phytoremediation of soils contaminated with environmentally toxic heavy metals and metalloids such as zinc, cadmium, lead, and arsenic. Re/Views in Environmental Science and Bio/Technology 3, 71-90. Alkorta I, Hernández-Allica J and Garbisu C (2004) Plants against the global epidemic of arsenic poisoning. Environment International 30, 949-951. Almås ÅR and Singh BR (2001) Plant uptake of Cadmium-109 and Zinc-65 at different temperature and organic matter levels. J. Environ. Qual. 30, 869-877. 2 Almås ÅR and Singh BR (2001) Partitioning and reaction kinetics of 109Cd and 65Zn in an alum shale soil as influenced by organic matter at different temperature. In: Trace Elements in Bioavailability Flux es and Transfer in soils and Soil Components, Iskander A, Kirkham MB and Banin A (eds) CRC Press, pp. 199-211. Almås ÅR, Salbu B and Singh BR (2000) Changes in partitioning of Cadmium-109 and Zinc-65 in soil as affected by organic matter addition and temperature. Soil Sci. Soc. Am. J. 64, 19511958. Al-Najar H, Schulz R and Römheld V (2003) Plant availability of thallium in the rhizosphere of hyper-accumulator plants: a key factor for assessment of phytoextraction. Plant Soil 249, 97-105. Álvarez-Fernández A, Paniagua MP, Abadía J and Abadía A (2003) Effects of Fe deficiencychlorosis on yield and fruit quality in peach (Prunus persica L. Batsch). Journal of Agriculture and Food Chemistry 51, 5738-5744. Álvarez-Fernández A, García-Laviña P, Fidalgo C, Abadía J and Abadía A (2004) Foliar fertilization to control iron chlorosis in pear (Pyrus communis L.). Plant and Soil 263, 5-15. Amtmann A, Fischer M, Marsh EL, Stefanovic A, Sanders D and Schachtman DP (2001) The wheat cDNA LCT1 generates hypersensitivity to sodium in a salt-sensitive yeast strain. Plant Physiol. 126, 1061-1071. Andaluz S, López-Millán AF, Peleato ML, Abadía A and Abadía J (2002) Increases in phosphoenolpyruvate carboxylase activity: a key response of sugar beet roots to iron deficiency. Plant and Soil 241, 43-48. Andrés-Colás N, Sancenón V, Rodríguez-Navarro S, Mayo S, Thiele DJ, Ecker JR, Puig S and Peñarrubia L (2006) The Arabidopsis heavy metal P-type ATPase HMA5 interacts with metallochaperones and functions in root copper detoxification. Plant J. 45(2), 225-236. Andrews CJ, Cummins I, Skipsey M, Grundy NM, Jepson I, Townson J and Edwards R (2004) Purification and characterisation of a family of glutathione transferases with roles in herbicide detoxification in soybean (Glycine max l.); selective enhancement by herbicides and herbicide safeners. Pesticide Biochemistry and Physiology 82, 205-219. Aniento F, Helms BJ and Memon AR (2003) How to make vesicles: coat protein-membrane interaction. Annual Plant Reviews, Blackwell Press, pp. 36-62. Antonielli M, Pasqualini S, Batini P, Ederli L, Massacci A and Loreto F (2002) Physiological and anatomical characterisation of Phragmites australis leaves. Aquatic Botany 72, 55-66. Anza M, Garbisu C and Riga P (2005) Time course of antioxidant responses of Capsicum annuum L. subjected to a progressive magnesium deficiency. Annals of Applied Biology 146, 123-134. Arias CA and Brix H (2003) Humedales artificiales para el tratamiento de aguas residuales. Revista Ciencia e Ingeniería Neogranadina 13, 17-24 (in Spanish). Arias CA and Brix H (2005) Initial experience from a compact vertical flow constructed wetland treating single household wastewater. – In: Natural and Constructed Wetlands: Nutrients, Metals and Management (Edited by J. Vymazal), Backhuys Publishers, Leiden, The Netherlands, pp. 52-64. Arias CA and Brix H (2005) Phosphorus removal in constructed wetlands: Can suitable alternative media be identified? Water Science and Technology 51(9), 267-273. Arias CA, Del Bubba M and Brix H (2001) Phosphorus removal by sands for use as media in subsurface flow constructed reed beds. Water Research 35, 1159-1168. 3 Arias CA, Brix H. and Johansen NH (2003) Phosphorus removal from municipal wastewater in an experimental two-stage vertical flow constructed wetiand system equipped with a calcite filter. Water Science and Technology 48(5), 51-58. Arias CA, Cabello A, Brix H and Johansen NH (2003) Removal of indicator bacteria from municipal wastewater in an experimental two-stage vertical flow constructed wetland system. Water Science and Technology 48(5), 35-41. Arias CA, Brix H and Marti E (2005) Recycling of treated effluents enhances removal of total nitrogen in vertical flow constructed wetlands. Journal of Environmental Science and Health Part A -Toxic/Hazardous Substances & Environmental Engineering 40 (6-7), 1431-1443. Arisi ACM, Mocquot B, Lagriffoul A, Mench M, Foyer CH and Jouanin L (2000) Responses to cadmium in leaves of transformed poplars overexpressing g-glutamylcysteine synthetase. Physiologia Plantarum 109, 143-149. Arthur AE, Crews H and Morgan CL (2000) Optimising plant genetic strategies for minimising environmental contamination in the food chain. Int. J. of Phytoremediation 2, 1-21. Assunçao AGL, da Costa-Martins P, de Folter S, Vooijs R, Schat H and Aarts MGM (2001) Elevated expression of metal transporter genes in three accessions of the metal hyperaccumulator Thlaspi caerulescens. Plant Cell Environ. 24, 217-226. Assunção AGL, Schat H and Aarts MGM (2003) Thlaspi caerulescens, an attractive model species to study heavy metal hyperaccumulation in plants. New Phytol 159, 351-360. Assunção AGL, Ten Bookum WM, Nelissen HJM, Vooijs R, Schat H and Ernst WHO (2003) A cosegregation analysis of zinc (Zn) accumulation and Zn tolerance in the Zn hyperaccumulator Thlaspi caerulescens. New Phytol 159, 383-390. 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Aubert S and Schwitzguébel JP (2002) Separation of sulphonated anthraquinones in various matrices by capillary electrophoresis. Chromatographia 56, 693-697. Aubert S and Schwitzguébel JP (2004) Screening of plant species for the phytotreatment of wastewater containing sulphonated anthraquinones. Water Research 38, 3569-3575. Awad F and Römheld V (2000) Mobilization of heavy metals from contaminated calcareous soils by plant born, microbial and synthetic chelators and their uptake by wheat plants. J. Plant Nutr. 23, 1847-1855. 4 Azaizeh HA, Salhani N, Sebesvari Z and Emons H (2003) The potential of rhizosphere microbes isolated from a constructed wetland to biomethylate selenium. J. of Environmental Quality 32, 55-62. Baciocchi E, Gerini MF, Harvey PJ, Lanzalunga O and Mancinelli S (2000) Oxidation of aromatic sulfides by lignin peroxidase from Phanerochaete chrysosporiu. Eur. J. Biochem. 267, 2705-2710. 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