chapter three

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CHAPTER THREE SPECTROMETER DEVELOPMENT
CHAPTER THREE
Development of the TuFIR
Spectrometer
Three characteristic properties are used to judge the overall performance of any
spectrometer [1]:
1. sensitivity,
2. resolution,
3. precision.
All three parameters are closely related, and it is not usually possible to change one
without affecting the others. For high resolution, gas-phase, FIR spectroscopy, the
sensitivity, resolution, and precision should all be as high as possible but in most
experiments a compromise is reached. The Cambridge TuFIR spectrometer has been
developed with two major applications in mind:
1. to search for the spectra of novel transient species,
2. to record highly accurate pressure broadening data.
In the first case, the initial radical searches are made at very high sensitivity, over a wide
frequency range at the expense of the spectral resolution and precision. Once the radical
spectrum has been observed, its S:N ratio is optimised, essentially making the
spectrometer even more sensitive. The scan windows are then reduced and the radical
spectrum is re-recorded with high precision and resolution, but at a lower S:N ratio.
Consequently, a definitive assignment of the spectral features is possible. In the pressure
broadening experiments, the sensitivity and precision have to be optimised so that the
line profile can be recorded as accurately as possible. Many pressure-broadening studies
concentrate on single, isolated spectral lines, so the spectral resolution is not as
significant. In addition, the resolution changes through the experiment so it can
sometimes be advantageous not to resolve all the components of a spectral feature,
provided that the true line-profile can be modelled correctly. This is illustrated in
Chapters 4 and 5 of this thesis, where pressure-broadening studies are discussed further.
65
CHAPTER THREE SPECTROMETER DEVELOPMENT
The sensitivity of the TuFIR spectrometer is directly related to the minimum
detectable signal power. Generally, this depends on the responsivity and noise
characteristics of the detector (related to the S:N ratio of the system), the fraction of the
incoming radiation absorbed by the sample (governed by Beer Lambert’s Law), and the
electronic signal processing. For a bolometric detector with uniform responsivity over
the filter bandwidth, , Philips has shown that the S:N ratio is given by [2]:
S PTuFIR

t
(3.1)
N
NEP
where PTuFIR is the power of the TuFIR sideband at the detector, the NEP is the noise
equivalent power of the detector, and t is the integration time at each point in the
spectrum. Although the TuFIR sidebands are more intense than the blackbody
background radiation, the source noise does not usually exceed the detector noise, (figure
3.1). The spectrometer sensitivity is therefore directly dependent on the power of the
TuFIR sidebands. In this thesis, the sidebands are discussed in terms of their intensity
(which is proportional to PTuFIR) and are expressed in terms of their video-detected
voltage, measured either at the oscilloscope or the LIA.
For any transition at frequency o between two non-degenerate energy levels, i
and j, the sideband intensity is given by Beer-Lambert’s law [3]:
V  Vo expS ij NLs(   o )
(3.2)
where V is the sideband intensity at the detector (in Volts), Vo is the sideband intensity
entering the cell (in Volts), Sij is the transition line strength, derived from the quantummechanical transition probability, N is the molecular concentration of the sample (in
molec.cm-3), L is the sample length (in cm), and s(-o) is the transition profile, where 
is the sideband frequency. For an optically thin sample, equation 3.2 can be rewritten as:


V  Vo 1  S ij NLs(   o )
so the fractional sideband absorption is given by:
(3.3)
V Vo  V

 S ij NLs(   o )
(3.4)
Vo
Vo
As the sidebands are either AM or FM modulated, the fractional sideband absorption is
time and frequency dependent and the actual sideband intensity at the LIA depends on
the harmonic settings of the PSD. Consequently, the spectrometer sensitivity differs
between 1st and 2nd derivative spectra, and can be affected by many of the scan
parameters. In this thesis, the sensitivity is either quoted in terms of the percentage
66
CHAPTER THREE SPECTROMETER DEVELOPMENT
noise spectrum –
0.008
lasers off
noise spectrum –
lasers on
Intensity (arb units)
0.006
A
noise spectrum –
0.004
CO2 laser de-tuned
0.002
B
noise spectrum –
B
B
B
B
FIR laser de-tuned
B
0.000
B
-0.002
B
700.4
700.6
700.8
701.0
701.2
B
701.4
Frequency (GHz)
Figure 3.1: Noise Spectra, recorded on the Cambridge TuFIR spectrometer. The top two
plots verify that the source noise does not exceed the detector noise provided that the
laser system is tuned correctly. If the CO2 laser is de-tuned, large spurious noise peaks
appear (A). If the FIR laser is de-tuned, sharp interference peaks appear in the spectrum
(B). Blake et al have shown that these peaks are due to interference between the FIR
laser frequency, and ‘feedback signals’ from the diode mixer e.g. TuFIR and FIR
frequencies [1]. These peaks have random phase and their frequency spacing
approximately matches the free spectral range of the laser.
67
CHAPTER THREE SPECTROMETER DEVELOPMENT
absorption of the sideband (V/Vo x 100) or N/V, the number of molecules per cm3 that
can just be detected above the noise level. The S:N ratio is often used to compare the
relative sensitivity between two similar scans, covering identical transitions from the
same molecule.
Rayleigh’s Criterion expresses the spectral resolution of a system. Two spectral
features of equal intensity, Imax, centred at frequencies  and +d, are just resolvable
from each other when the intensity between the peaks is [4]:
I 2 d 
2
8
2
I max
(3.5)
If d/ is very small, the instrument operates at high resolution. In visible and near-IR
spectroscopy, the spectral resolution is often limited by the bandwidth of the source [5].
The linewidth of the TuFIR source is determined by the stability of the FIR laser, as the
microwave source is accurate to less than 10Hz [6]. The bandwidth of most FIR laser
lines is between 300kHz and 500kHz, and depends on the alignment and fine-tuning of
the whole laser system [7]. However, in FIR spectroscopy the spectral resolution is
determined by the intrinsic line profile of the absorbing species, i.e. s(-o). The total
line profile is described by the Voigt function, a convolution of the Doppler-broadening
and pressure-broadening contributions to the lineshape. Over the range of this
spectrometer, (600GHz to 1.2THz), the Doppler-broadening of a ‘medium weight’
molecule, such as SO2 or CHF3, ranges from around 500kHz to 1.2MHz at 298K. The
pressure broadening can be reduced by operating at low pressures, but generally exceeds
the Doppler linewidth, even at sample pressures of a few mTorr.
The precision describes the uncertainty to which a single frequency measurement
can be determined from the TuFIR spectrum. It is a statistical quantity, and is usually
expressed as the standard deviation of a spectral point from its mean value, i.e. [3]:


1
 n   2  2
i

  
 i 1

(3.6)
n


where n is the number of times each point is recorded, i are the individual frequency
measurements, and  is the mean frequency measurement, given by:

1 n
 i
n i 1
(3.7)
68
CHAPTER THREE SPECTROMETER DEVELOPMENT
The mean frequency is usually quoted to a particular accuracy (). The accuracy of
the mean is determined from the statistical and systematic errors in the system, whereas
the precision only depends on the statistical errors. In this experiment, the precision is
affected by:
1. the accuracy to which the FIR laser frequency is known,
2. frequency drift of the FIR laser during a scan,
3. the ‘rate’ at which data is recorded,
4. the digitisation across the scan range,
5. the number of individual readings used to compute a single point in each
spectrum.
If the laser system is allowed to warm-up and stabilise for around 2 hours, the frequency
drift can be eliminated. In the Cambridge TuFIR spectrometer, a laser line is only used to
generate TuFIR sidebands if its frequency has been accurately measured elsewhere [7].
Typically these measurements are accurate to a few hundred kHz [7].
This chapter describes the development work undertaken to improve the overall
performance of the Cambridge TuFIR spectrometer. Firstly, the system alignment and
signal optimisation are described, with particular reference to the new spectrometer
configuration, (B). This chapter then explains in detail, the three major developments
that were introduced to the TuFIR spectrometer during this PhD, i.e.:
1. the removal of the FPI,
2. the Brewster window absorption cell,
3. computerised control of the spectrometer.
Throughout the chapter, these improvements are illustrated with TuFIR spectra of SO2
and CHF3. All the changes that have been made to this spectrometer by the author are
summarised. The sensitivity, resolution, and precision of the final spectrometer
configuration are highlighted.
3.1 Alignment of the TuFIR Spectrometer
The spectrometer alignment was necessary to optimise the throughput of the
TuFIR sidebands, thereby increasing the spectrometer sensitivity. The stability of the
laser system also affected the sideband power and noise levels. Consequently, TuFIR
spectra could only be recorded when both the laser and optical systems had been aligned.
69
CHAPTER THREE SPECTROMETER DEVELOPMENT
3.1.1 Laser System Alignment
The vacuum integrity and intra-cavity alignment of both lasers affected their
output power and mode quality. In practice, the system was realigned about once a year.
Figure 3.2 shows the optical arrangement used to align the lasers in configuration B.
Mirror H is greyed out because it is removed during any stages involving the alignment
of the CO2 laser. The He-Ne beams were diffracted as they passed through the FIR laser
resonator and the irises A, D, G, and J. The superposition’s of these diffraction patterns
were used to judge the alignment accuracy. In addition, a small proportion of each beam
was re-reflected from the front face of the ZnSe lens and used to check the lens
alignment. In figure 3.2 these patterns are shown at strategic points around the optical
system.
The alignment procedure for the CO2 laser is outlined in the PL6 instruction
manual [8]. The output coupler scatters any incident He-Ne radiation so the whole PZT
stack was removed from the laser for alignment purposes. The Brewster windows at the
ends of each discharge tube were replaced with PTFE ‘blanks’. A PTFE insert, with a
small hole drilled down the middle, was pushed down the full length of each tube to
check its vertical and horizontal alignment. Mirror F was adjusted to align the He-Ne
down the first discharge tube: the two intra-cavity steering mirrors were used to adjust
the beam position in the second tube. The reflection from the diffraction grating was a
series of vertical spots that tracked through the iris at G as the grating angle was
changed. In practice, the diffraction grating also had to be horizontally adjusted. When
the brightest spot was set to pass though iris G it could just be observed as a diffuse
image at the output coupler of He-Ne 1.
Mirror H was then positioned in front of the CO2 laser and He-Ne 2 aligned
through the system as shown in figure 3.2. The input coupler was then repositioned on
the FIR laser ensuring that both He-Ne beams passed directly through the 1.5mm hole at
the centre of the mirror. The diffraction pattern from He-Ne 1 could no longer be
observed at E, but was reflected back by the input coupler mirror to D. When these
specular reflections were positioned co-centrically with the other diffraction patterns, the
mirror was aligned perpendicularly to the resonator tube. Once the Brewster window had
been replaced on the end of the FIR laser, He-Ne 2 and all the optics from F to J were
70
CHAPTER THREE SPECTROMETER DEVELOPMENT
.
.
G
CO2 Laser
He-Ne 2
F
H
J
.
I
E
He
.
.
Ne
1
.
FIR
Laser
Iris G
almost closed
A
.
Iris G
fully open
D
.
C
B
.
.
Iris D
almost closed
Iris D
fully open
Figure 3.2: The optical arrangement used to align the FIR Laser system in
Configuration B. The output frequency of both He-Ne lasers is actually red, but HeNe 2 is shown in green here for clarity. See text for details.
71
CHAPTER THREE SPECTROMETER DEVELOPMENT
raised by 2mm to retrieve the alignment. After this, He-Ne 2 was no longer required and
mirror H was removed. The Brewster windows were then replaced at each end of the
CO2 laser discharge tubes and the beam was shifted back down 2mm by the first window
and up 2mm by the second. The diffraction grating angle was adjusted to accommodate
the beam shift at this point.
The output coupler and PZT stack were then repositioned on the CO2 laser. The
laser was operated at low powers (<1W) by reducing the gas flow rate (<1mBar residual
pressure) and discharge current (10mA). The orientations of the output coupler and PZT
stack were iterated until a near field mode pattern resembling TEM00 was observed. The
horizontal alignment of the diffraction grating was also changed to compensate for these
adjustments at the other end of the laser cavity. A ‘shadow’ was often observed in the
near field intensity pattern because some of the radiation transmitted by the output
coupler was re-reflected from its back face and was lasing slightly off-axis within the
cavity. This secondary image was superimposed on the main mode pattern once the
output coupler wedge was orientated perpendicularly to the cavity. The mode quality and
low power output of the 9R4, 9P2, 10R4, and 10P2 lines were then tested. A spectrum
analyser was used to check the diffraction grating calibration.
Once laser action had been re-established in the CO2 laser, the output beam was
not usually coincident with He-Ne 1. The height and position of the CO2 laser were
adjusted until the radiation was focused right through the FIR input coupler hole. Iris G
was fully opened and a power meter was placed consecutively in front of the CO2 laser,
and at D. The power at the end of the FIR laser was typically between 70 and 80% of the
CO2 laser output power. The throughput could be optimised by making very small
adjustments to mirror F or the focusing lens. The power throughput was then re-tested on
one laser line in each P- and R- branch.
Finally the output coupler was repositioned on the FIR laser. The dichroic mirror
was opaque at visible wavelengths, so the incoming He-Ne beam was reflected straight
back onto the aperture of the He-Ne laser when the output coupler was aligned. The FIR
cavity was pumped for 24 hours then cooled. FIR laser action was re-established on the
strongest FIR laser lines, e.g. HCOOH and CH3OH lines. The position of the dichroic
output coupler was then manually adjusted to optimise the power output and stability.
72
CHAPTER THREE SPECTROMETER DEVELOPMENT
Laser Gas
C2H5F
Output
(GHz)
(where (m)
known)
1069
Pump
Line
>5mW
output*
Sidebands
Obtained
9R10
Cu
Waveguide
Inserted



-
660
9R16



577.5511
519.075
9R4



596.8842
502
9R24



-
486
9R24



-
452
9R22



739.3075
405.504
9R30



-
378
10R32



-
376
10R14



-
362.1
10R18



-
336.7
9R16



-
330.2
10R22



-
217.1
10R14



729.9328
410.712
10R12

33mW

846.4503
354.176
10R16

20mW

869.5227
344.778
10R04

12mW

952.2039
314.841
10R10

8mW

1003.5366
298.736
10R24

16mW

CH2CF2
375.545
375.5
10P12

17mW

CH2CHF
902.0016
332.364
10P6

6mW

CH2F2
783.486
382.639
9P10

28mW

887.551
337.97
9R14

6mW

918.4170
326.423
9R14

19mW

1035.5527
289.5
9P4

7mW

1042.1504
287.667
9R34

12mW

1100.8067
272.339
9P10

12mW

1145.4301
261.729
9P38

5mW

-
235.5
9R6

15mW

CD3OD
73
CHAPTER THREE SPECTROMETER DEVELOPMENT
-
227.66
9R18



1397.1186
214.579
9R34

6mW

-
196.1
9R32

9mW

1779.1393
166.631
9R20

14mW

1891.2743
158.513
9P10

8mW

2546.495
117.727
9R20

15mW

2742.946
109.290
9P24



CH3Cl
858.0533
349.387
10R18

5mW

CH3F
604.2973
496.101
9P20

6mW

CH3OD
980.5916
305.726
9R08

26mW

CH3OH
525.4275
570.569
9P16

42mW

812.1954
369.114
9P16



1838.8393
163.034
10R38

30mW

252.27816
118.8
9P36

55mW

3105.9368
96.522
9R10

26mW

-
326.6
10P6

32mW

-
310.8
9P34

16mW

-
310
10R34

28mW

-
307.5
10R30

25mW

580.5629
516.382
10R08

17mW

790.5046
379.242
10R40

14mW

DCOOD
787.7555
380.565
10R12

7mW

HCOOD
649.9410
461.261
10P16

6mW

810.3205
369.968
10R28

18mW

716.1565
418.613
9R22

33mW

761.6065
393.631
9R18

37mW

CHFCHF
COF2
HCOOH
* Powers were calculated from the peak-to-peak voltage response of a Golay Detector
placed directly in front of the FIR output.
Table 3.1: The laser lines observed from the Cambridge FIR Laser system. Those
lines with frequencies between 600GHz and 1.2THz are highlighted. A star indicates
those lines suitable for TuFIR spectroscopy. (See Ref. [7] for further details of each
laser transition).
74
CHAPTER THREE SPECTROMETER DEVELOPMENT
The FIR laser was then tested on the weaker laser lines (P<500W) and long
wavelength lines (>600-1000m), which were harder to couple out of the laser cavity.
Some of the weaker lines were only observed with a 22mm-bore, hollow Cu waveguide
inside the FIR cavity. The lines observed on the Cambridge FIR system are summarised
in table 3.1. Theoretically TuFIR sidebands can be generated from any FIR laser line, but
in this experiment only very stable lines with output powers above 10mW and output
frequencies between 600GHz and 1.2THz gave sidebands that were suitable for TuFIR
spectroscopy, (table 3.1). The most stable FIR lines are those where no line competition
exists between laser transitions that share a common pump line, or those transitions that
are uniquely pumped.
3.1.2 Optical System Alignment
The optics were aligned in three stages:
1. ‘rough’ system alignment with a He-Ne laser,
2. accurate alignment of the FIR laser signal through the system,
3. detection and optimisation of the TuFIR sideband power at the detector.
There was no suitable method for observing the FIR or TuFIR beams directly, so after
the ‘rough’ alignment stage the signals were aligned from their peak-to-peak signal
intensity, as measured on an SS-5750 Iwatsu oscilloscope [9]. The three optical
alignment stages are shown in figures 3.3 to 3.5, (for configuration B).
The behaviour of many of the spectrometer optics differed at visible and FIR
frequencies, so it was not possible to align the system accurately with the He-Ne laser.
Also, the 1/e2 value of the He-Ne beam-waist was only 0.8mm, compared to a waist size
of 7mm for the FIR laser beam and 10mm for the TuFIR beam. The grid polariser and
the focusing mirrors were replaced with plane mirrors, C, D, and F for the He-Ne
alignment. Assuming that the FIR laser system had already been aligned, He-Ne 1 was
coincident with the FIR laser output. The height of He-Ne 2 was adjusted accordingly,
and both beams were set parallel to the optical bench over a 4m pathlength, (figure 3.3).
Mirror C was then placed in front of the FIR laser and He-Ne 2 aligned through the
diplexer. This alignment was only approximate as the Melinex transmitted almost all the
He-Ne radiation incident on it. The He-Ne beam exited the diplexer at port 2, and was
focused onto the apex of the corner cube from the off-axis parabolic mirror (OAP). A
75
CHAPTER THREE SPECTROMETER DEVELOPMENT
‘dentists mirror’ was used to check that the beam was focused to a sharp point at the
whisker antenna.
pump
CO2 Laser
ZnSe Lens
I
He-Ne 2
J
He
Ne
FIR
1
Laser
E
CO2 laser
A
He-Ne 1
beam
He-Ne 2
C
D
B
H
G
OAP
Diode
Diplexer
Figure 3.3: The first optical alignment stage.
Figure 3.4 shows the FIR alignment. Once FIR laser action had been established,
the mirror at C was replaced with a Golay cell and a 15Hz chopper, (to modulate the
beam). The Golay detector was linked directly to the oscilloscope to monitor the laser
power. A Teflon lens was used to collimate the FIR beam and the laser system adjusted
until the Golay’s response was ‘super’-saturated, (figure 3.4a). The Golay cell was then
removed and the FIR beam was directed through the diplexer onto the mixer diode: 0.7V
of forward bias was applied to the diode, equivalent to 200A current. An oscilloscope
was used to monitor the voltage response of the diode to the incident FIR radiation.
Initially this signal was less than 2mV. By adjusting the diplexer pathlength difference,
OAP mirror and the cube position, the signal could be optimised to around 50mV,
76
CHAPTER THREE SPECTROMETER DEVELOPMENT
equivalent to 600A of induced current at the diode. The grid polariser (GP) was then
placed in front of the laser at 45o to the incoming radiation. The grid wires were rotated
until no signal loss was observed at the diode. A Golay cell was used to check the
intensity of the reflected FIR radiation. Typically this was less than 1% of the total beam
intensity and was difficult to distinguish from the Golay’s response to the fluorescent
lighting.
The InSb ‘hot electron’ detector was then placed opposite the Golay cell to detect
the FIR radiation that had been re-transmitted from the diode, (figure 3.4b). The detector
response was also monitored on the oscilloscope. A Teflon lens, with a 15cm focal
length, was used to focus the incoming FIR radiation through the HDPE detector
window and into the detector light pipe. Usually, the incoming beam at the diode was not
well matched to the antenna angle so the re-radiated FIR beam followed a significantly
different path out of the diplexer system. Consequently, the oscilloscope signal from the
InSb detector was just visible above the detector noise, (6 to 8mV). The diplexer, OAP
mirror, and cube positions were adjusted iteratively until the oscilloscope registered 3 to
4V from the detector and 80mV from the diode, (equivalent to an induced current of
1mA). When irises G and H were removed, the S:N ratios at the detector and the cube
were unchanged, provided that there was no leakage from ports 3 and 4 of the diplexer.
The two focusing mirrors, D and F, were then aligned. Interesting ‘cavity effects’
were found throughout the spectrometer between consecutive sets of optics. As the
position of each mirror was altered, the beam intensity varied sinusoidally. These local
‘maxima’ were used to adjust individual optics and maximise the throughput of the FIR
beam. The FIR beam was focused 30cm away from the two mirrors D and F, with a
minimum beam diameter of 1cm. Beyond this point the beam intensity dropped off
rapidly, i.e. at 1m, the intensity was 1/10th of its original value, and the beam diameter
was 2cm. Further investigations showed that this cavity–like behaviour was even more
acute if the mirrors at D and F, (with 1m radius of curvature (roc)), were replaced with
plane mirrors, or mirrors with shorter focal lengths. Eventually, 2.5m-roc and 4.4m-roc
mirrors were used to focus the FIR beam 1.5m from D and F. Minor adjustments were
made to all the optics until the detector signal was 3-4V and the diode signal 80mV, (at
the oscilloscope). The FPI was then placed close to the focal point of the beam, to
77
CHAPTER THREE SPECTROMETER DEVELOPMENT
a. Initial Golay Cell Alignment
Oscilloscope
FIR
Laser
Lens
Chopper
Golay Cell
G
OAP
FIR
H
Diplexer
Diode
b. InSb Detector Alignment
InSb ‘hot
electron’
Detector
FIR
F
Laser
FPI
Golay
Cell
D
FIR
Oscilloscope
H
GP
G
OAP
Diplexer
Diode
Figure 3.4: The alignment of the FIR beam through the TuFIR Spectrometer.
Optics shaded light grey show their temporary positions during the alignment.
78
CHAPTER THREE SPECTROMETER DEVELOPMENT
maximise its throughput, (section 2.3.3). The plate positions were adjusted until discrete
transmission peaks were observed. The oscilloscope signal from the detector was
reduced to about 70% of its original value.
Figure 3.5 shows the set-up used to detect and maximise the TuFIR sidebands.
With the chopper removed the maximum current on the diode rose to around 1.5mA.
When the microwave source was switched on the diode bias was reduced to around
0.05V, to limit the total diode current to 2mA. The microwaves were AM modulated,
with a 1.5kHz square-wave, so the re-radiated TuFIR and FIR signals were also
modulated. With the FIR laser switched off, the maximum noise signal at the
oscilloscope was 5mV peak-to-peak, corresponding to the electrical and background
noise contributions to the detector output. This gave a minimum detectable power of
1.25W. When the signal was filtered and amplified, (60dB), the minimum detectable
power was around 10nW, so the InSb detector signal was fed to the oscilloscope via the
bandpass filter and amplifier.
InSb ‘hot
electron’
Detector
FPI
Preamplifier &
bandpass filter
FIR
TuFIR = FIR  -wave
F
Laser
FIR
Signal
Generator
D
GP
OAP
Swept Frequency
Microwave
Synthesiser
-wave
GP
Diplexer
Diode
Oscilloscope
FIR
sideband
FIR radiation
TuFIR radiation
Figure 3.5: The alignment of the TuFIR sidebands through the Spectrometer.
79
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