BIO 112: Organisms, Evolution, & Ecosystems Fall 2012 Syllabus Professor: Dr. Mark Stanback Office: Watson 282 Phone: 704-894-2325 email: mastanback@davidson.edu Office Hours Mon 1:00 - 3:00 Tues 1:00 - 3:00 or by appointment Lecture: TR 9:40 - 10:55 in Chambers 2146 Lab Section C (14138): W 1:30 - 4:20 in Watson 119 Lab Section D (14139): R 1:40 - 4:20 in Watson 119 Course Description: Biology 112 is intended as an in-depth introduction to the principles of biology at and above the level of the organism. Our focus will be on evolution, ecology, physiology, and anatomy. Important: I use e-mail as a regular form of communication in this class. You should check your email at least once a day (and remember, always fill in the subject line). Textbooks* Sadava, D., D.M. Hillis, H.C. Heller, M.R. Berenbaum. 2009. Life: the Science of Biology, ninth ed. Sinauer, Sunderland, Mass. Nesse, R.M., G. C. Williams. 1994. Why We Get Sick: the New Science of Darwinian Medicine. Random House, New York. **Pechenik, J.A. 2012. A Short Guide to Writing About Biology, eighth ed. Pearson, Boston. * For your convenience I have put one copy of Sadava et al, one copy of Nesse and Williams, and one copy of Pechenik on reserve in the library. **The 7th edition of Pechenik is also acceptable. Other Resources: The Math & Science Center (MSC) offers free assistance to students in all areas of math and science, with a focus on the introductory courses. Trained and highly qualified peers hold one-on-one and smallgroup tutoring sessions on a drop-in basis or by appointment, as well as timely recap sessions ahead of scheduled reviews. Emphasis is placed on thinking critically, understanding concepts, making connections, and communicating effectively, not just getting correct answers. In addition, students can start or join a study group and use the MSC as a group or individual study space. Located in the Center for Teaching & Learning (CTL) on the first floor of the College Library, drop-in hours are Sunday through Thursday, 8-11 PM, and Sunday, Tuesday, Thursday, 4-6 PM, beginning Sunday, September 2. Appointments are available at other times. For more information, visit www3.davidson.edu/cms/x39569.xml, or contact Dr. Mark Barsoum (mabarsoum or ext. 2796). Check out your text’s excellent online supplement: (http://www.thelifewire.com). You should also be able to access www.yourBioPortal.com. Both provide information, practice quizzes, animated tutorials, activities, and suggested readings for each chapter. On Tuesdays we’ll sometimes start class by discussing pertinent articles from the NY Times Science section. It’s a great way to keep up with cool findings in science! Lab Fee: There is a $10 lab fee due by the end of the first week. Reviews: Reviews will consist of multiple choice, short answer, and discussion questions. Reviews will be taken in class and are closed book. Spots can be found on Moodle. Moodle: I will post not only spots, but also lectures, handouts, and readings on Moodle. This is also where you’ll take your Why We Get Sick quizzes. Although we can’t go entirely paperless in this course, you should try to minimize unnecessary printing (there’s really no need for hard copies of spots or lectures). Every day is Earth Day! Grades: Lecture Grade: Review 1 (3, 4 Oct: in lab) Review 2 (14, 15 Nov: in lab) Cumulative Final Exam (Chambers) Why We Get Sick quizzes Laboratory Grade: Pig Practical (8 Nov) Pig Quizzes (3 @ 10 pts each) Cardinal Poster (10 Dec) Total Course Points Possible = = = = 100 100 200 120 = = = = 100 30 25 675 Letter grades will be assigned using the following guidelines. A = 93.33 - 100% of total possible points A= 89.99 - 93.32 C = B+ = 86.66 - 89.98 C= B = 83.33 - 86.65 D+ = B= 79.99 - 83.32 D = C+ = 76.66 - 79.98 F = 73.33 - 76.65 69.99 - 73.32 66.66 - 69.98 59.99 - 66.65 <59.99 Honor Code: All of your work in this course is covered under the college honor code and must be pledged (the word “pledged” and your signature). Points will be deducted from any work that is not pledged. Please visit the following page on the departmental web site for a detailed discussion of what constitutes plagiarism in scientific writing http://www.bio.davidson.edu/dept/plagiarism.html Attendance: You are expected to attend all lecture and laboratory sessions and arrive on time. Any student missing more than 2 labs will lose a letter grade. Please note that I do not distinguish between good and bad causes of or reasons for an absence. You are responsible for any assignments given or due on days missed. You are on your honor to record attendance accurately on posted attendance sheets. A busy schedule (e.g. reviews in other courses, major papers due, commitments to service and social organizations, personal travel) will not be considered a valid excuse for rescheduling reviews or lab practicals. Lecture topics will be covered in the order shown below. I will announce in class which chapters/pages you should be reading for upcoming lectures and will inform you of all information to be covered on scheduled reviews. Lecture Topics EVOLUTION Mechanisms of Evolution Species and Speciation Chapters in Sadava et al. 21 22, 23 ECOLOGY Behavioral Ecology Population Ecology Community Ecology Systems Ecology 53 55 56, 57 58 ANATOMY & PHYSIOLOGY Intro to Physiology and Anatomy Hormones Osmoregulation Circulation Gas Exchange Reproduction 40 (in part) 41 (in part) 52 (in part) 50 49 43 Why We Get Sick: Many people mistakenly think that evolutionary biology has no relevance in our lives. This short, readable book will not only address the importance of evolution to medicine, it will also help you to think like an evolutionary biologist. We will read this book during the first half of the semester and spend the beginning of each designated class period (see below) discussing it. On these days, there will be a Moodle quiz on the day’s material due before class (available from 9:30 a.m. the day before to 9:30 a.m. of the “quiz day”). There will be a total of 12 quizzes, each worth 10 points. You will have 15 minutes to take each quiz (they are short). For several chapters there will be some additional supplemental reading (posted on Moodle). WWGS material will not be covered on the reviews or exam unless we also cover the material during lecture. Date 4 Sept 6 Sept 11 Sept 13 Sept 18 Sept 20 Sept 25 Sept 27 Sept 9 Oct 11 Oct 18 Oct 23 Oct Chapter 1, 2 3 4 5, 6 7 8 9 10 11 12 13 14, 15 Topic The Mystery of Disease, Evolution by Natural Selection Signs and Symptoms of Infectious Disease An Arms Race Without End Injury, Toxins Genes and Disease Aging as the Fountain of Youth Legacies of Evolutionary History Diseases of Civilization Allergy Cancer Reproduction Are Mental Disorders Diseases? The Evolution of Medicine LABORATORY The laboratory component of this course will feature computer simulations of evolution and ecology, an in-depth fetal pig dissection, and a field experiment. For the pig dissection, each student will get their own pig to dissect. You may use departmental dissection equipment. I will provide you with a thorough dissection manual and color manuals will also be available in lab. Consult appropriate chapters in your text while we are working on our pigs. Note that there will be quizzes during the pig dissection. For our field experiment we will examine inter- and intrasexual foraging competition in Northern Cardinals, a common campus bird. We will design our experiment prior to observing cardinals at bird feeders around campus. Each pair of students will produce a poster. Week of Aug 27 Sept 3 Sept 10 Sept 17 Sept 24 Oct 1 Oct 8 Oct 15 Oct 22 Oct 29 Nov 5 Nov 12 Nov 19 Nov 26 Dec 3 Activities Populus: selection and drift (HW problem set) Finches and Evolution How the Guppy Got Its Spots Flowers and Trees Isle Royale Review I in lab Keystone Predator Fetal Pig (external, digestive + quiz) (note that this is the week of Fall Break) Fetal Pig (respiratory, circulatory + quiz) Fetal Pig (circulatory, urogenital + quiz) Fetal Pig (review Wed and Thurs), Practical Thurs night (8 Nov) Review II in lab No lab: Thanksgiving Cardinal foraging ecology Cardinal lab data analysis, poster production, course evaluations (posters due 10 Dec) Bio Lunch! Every Friday the Biology Faculty and interested Biology students have lunch at Commons (from ~ 12:30 – 1:30). You don’t need to be a major. Join us!