CALIFORNIA, SANTA CRUZ
UNIVERSITY OF
CALIFORNIA, SANTA CRUZ
1156 High Street
Santa Cruz, CA 95064
TEL: (831) 459-3155
FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu
Email: olof@chemistry.ucsc.edu
Department of Chemistry and Biochemistry
Olof Einarsdottir, Professor and Chair.
Degrees Offered: B.A, B.S, M.S, Ph.D.
Fields of Specialization: Organic, Physical and Inorganic Chemistry and Biochemistry.
Interdisciplinary Program: Center for the Molecular
Biology of RNA (Department of Molecular, Cell &
Developmental Biology), Center for Biomolecular
Science and Engineering (Department of Computer
Science, Department of Molecular and Cell & Developmental Biology).
ANDERSON, ROGER W. (b.1943) Professor. B.A,
1964, Carleton College; M.A, 1965, Harvard University;
Ph.D, 1968, Harvard University. Chemical Physics; Theoretical Chemistry. Achromatic lenses for polar molecules; reaction mechanisms of light activated chemical
vapor deposition and homogeneous nucleation; quantum
calculations of energy transfer and reactions; small angle
x-ray scattering by fractal clusters. TEL: (831) 459-2854
FAX: (831) 459-2935
Web: chemistry.ucsc.edu/faculty/anderson.html
Email: anderso@chemistry.ucsc.edu
anderso@ucsc.edu
No publication information submitted for this edition.
1 infection in a phase 3 HIV-1 preventive vaccine trial, J. Infect. Dis, 191, 666-667 (2005).
P. B. Gilbert, M. L. Peterson, D. Follmann, M. G. Hudgens, D. P. Francis, M. Gurwith, W. L. Heyward, D. V.
Jobes, V. Popovic, S. G. Self, F. Sinangil, D. Burke and P.
W. Berman, HIV-1 virologic and immunologic progression
and initiation of antiretroviral therapy among HIV-1-infected
subjects in a trial of the efficacy of recombinant glycoprotein
120 vaccine, J. Infect. Dis, 192, 974-983 (2005).
D. V. Jobes, M. Daoust, V. Nguyen, A. Padua, S. Michele,
M. D. Lock, A. Chen, F. Sinangil and P. W. Berman, High
incidence of unusual cysteine variants in gp120 envelope
proteins from early HIV Type 1 infections from a phase 3
vaccine efficacy trial, AIDS Res. Hum. Retroviruses, 22,
1014-1021 (2006).
D. V. Jobes, M. Daoust, V. Nguyen, A. Padua, S. Michele,
M. D. Lock, A. Chen, F. Sinangil and P. W. Berman, Longitudinal population analysis of dual infection with recombination in two strains of HIV type 1 subtype B in an individual
from a phase 3 HIV vaccine efficacy trial, AIDS Res. Hum.
Retroviruses, 22, 968-978 (2006).
P. Pitisuttithum, P. Gilbert, W. Gurwith, W. Heyward, M.
Martin, D. van Griensven, D. Hu, J. W. Tappero and K.
Choopanya, Randomized, double-blind, placebo-controlled
efficacy trial of a bivalent recombinant glycoprotein 120
HIV-1 vaccine among injection drug users in Bangkok, Thailand, J. Infect. Dis, 194, 1661-1671 (2006).
BERNASCONI, CLAUDE F. (b.1939) Professor.
M.S, 1963, Swiss Fed. Inst. Technology; Ph.D, 1965,
Swiss Fed. Inst. Technology. Research Associate, 19651966, Swiss Federal Institute of Technology (ETH),
Zürich; Research Associate, 1966-1967, Max-Planck Institute for Physical Chemistry, Göttingen. Organometallic Chemistry; Physical Organic Chemistry. Physical and
mechanistic organic chemistry; proton transfers; nucleophilic addition to olefins and metal carbene complexes;
nucleophilic vinylic substitution; ab initio calculations.
TEL: (831) 459-2035 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/bernasconi.html
Email: bernasconi@chemistry.ucsc.edu
Nicolas Winter and Ilan Benjamin, Molecular dynamics
study of a model SN1 dissociation reaction at liquid/liquid interfaces: effect of liquid polarity, Isr. J. Chem, 47, 115-127
(2007).
Ilan Benjamin, Solute rotational dynamics at the water liquid/vapor interface, J. Chem. Phys, 127, 204712/1-204712/
11 (2007).
Ilan Benjamin, Empirical valence bond model of an SN2
reaction in polar and nonpolar solvents, J. Chem. Phys, 129,
074508/1-074508/11 (2008).
Ilan Benjamin, Structure and Dynamics of Hydrated Ions
in a Water-Immiscible Organic Solvent, J. Phys. Chem. B,
112, 15801-15806 (2008).
Nicolas Winter, John Vieceli and Ilan Benjamin, Hydrogen-Bond Structure and Dynamics at the Interface between
Water and Carboxylic Acid-Functionalized Self-Assembled
Monolayers, J. Phys. Chem. B, 112, 227-231 (2008).
Ilan Benjamin, Solute orientational dynamics at the water/
carbon tetrachloride interface, J. Phys. Chem. C, 112, 89698975 (2008).
Claude F. Bernasconi and Moises Perez-Lorenzo, Does
Aromaticity in a Reaction Product Increase or Decrease the
Intrinsic Barrier? Kinetics of the Reversible Deprotonation of
Benzofuran-3(2H)-one and Benzothiophen-3(2H)-one, J. Am.
Chem. Soc, 129, 2704-2712 (2007).
Claude F. Bernasconi, Martin E. Zoloff Michoff, Rita H.
De Rossi and Alejandro M. Granados, Kinetics of the Reactions
of
[p-Nitrophenoxy(phenyl)carbene]pentacarbonylchromium(0) with Aryloxide Ions, Hydroxide Ion,
and Water in Aqueous Acetonitrile. Concerted or Stepwise?,
J. Org. Chem, 72, 1285-1293 (2007).
Claude F. Bernasconi, Shoshana D. Brown, Irina Eventova
and Zvi Rappoport, Spectroscopic and Kinetic Evidence for
an Accumulating Intermediate in an SNV Reaction with
Amine Nucleophiles. Reaction of Methyl ␤-Methylthio-␣-nitrocinnamate with Piperidine and Morpholine, J. Org. Chem,
72, 3302-3310 (2007).
Claude F. Bernasconi, Moises Perez-Lorenzo and Shoshana D. Brown, Kinetics of the Deprotonation of Methyl nitroacetate by Amines: Unusually High Intrinsic Rate Constants
for a Nitroalkane, J. Org. Chem, 72, 4416-4423 (2007).
Claude F. Bernasconi, Moises Perez-Lorenzo and Sara J.
Codding, Reactions of [Aryloxy(phenyl)carbene]pentacarbonylchromium(0) Complexes with Thiolate Ions. Decreasing Reactivity with Increasing Basicity of the Nucleophile, J. Org. Chem, 72, 9456-9463 (2007).
Claude F. Bernasconi, Philip J. Wenzel and Mark L. Ragains, Proton Transfers in Aromatic and Antiaromatic Systems. How Aromatic or Antiaromatic Is the Transition State?
An Ab Initio Study, J. Am. Chem. Soc, 130, 4934-4944
(2008).
Miriam Karni, Claude F. Bernasconi and Zvi Rappoport,
Role of Negative Hyperconjugation and Anomeric Effects in
the Stabilization of the Intermediate in SNV Reactions, J.
Org. Chem, 73, 2980-2994 (2008).
BERMAN, PHILLIP W. (b.1948) Professor. A.B,
BOGOMOLNI, ROBERTO A. (b.1942) Professor.
1971, UC Berkeley. Postdoctoral Fellowship, 19771981, The Salk Institute; Postdoctoral Fellowship, 19811982, UC San Francisco. Immunology; Virology. Development of products and methods for the diagnosis, prevention and treatment of infectious diseases, esp. HIV-1;
analysis of the immune response to HIV-1 and the identification of epitopes recognized by broadly neutralizing
antibodies; engineering cell lines for the large scale purification of recombinant glycoproteins. TEL: (831) 4593529 FAX: (831) 459-1970
Web: www.cbse.ucsc.edu/people/berman
Email: pwb@soe.ucsc.edu
Ph.D, 1972, University of California, Berkeley. Clinical
Biochemist, 1964, University of Buenos Aires, Argentina, (professional degree in Pathology). Biophysics/Biophysical Chemistry; Photochemistry. Bacterial rhodopsin, structure and functional studies of retinal protein; pineal gland photoreceptor pigments, plant and microorganism blue-light receptors, flavoproteins and carotenoid
pigments, and new time-resolved Raman and infrared
techniques for detection of protein dynamics in the picoto-microsecond time scale. TEL: (831) 459-4294 FAX:
(831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/bogomolni.html
Email: bogo@chemistry.ucsc.edu
BENJAMIN, ILAN (b.1956) Professor. B.S, 1981,
Hebrew University of Jerusalem, Israel; Ph.D, 1986, Hebrew University of Jerusalem, Israel. Weizmann Postdoctoral Fellowship, 1985-1987, University of Pennsylvania; Postdoctoral Fellowship, 1987-1989, University
of California, San Diego. Computational Chemistry;
Theoretical Chemistry. Chemical reaction dynamics in
the condensed phase; molecular dynamics simulations
and theory; application to liquid surfaces and interfaces.
TEL: (831) 459-3152 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/benjamin_i.html
Email: benjamin@chemistry.ucsc.edu
benjamin@ucsc.edu
N. M. Flynn, D. N. Forthal, C. D. Harro, F. N. Judson, K.
H. Mayer and M. F. Para, Placebo-controlled phase 3 trial of
a recombinant glycoprotein 120 vaccine to prevent HIV-1 infection, J. Infect. Dis, 191, 654-665 (2005).
P. B. Gilbert, M. L. Peterson, D. Follmann, M. G. Hudgens, D. P. Francis, M. Gurwith, W. L. Heyward, D. V.
Jobes, V. Popovic, S. G. Self, F. Sinangil, D. Burke and P.
W. Berman, Correlation between immunologic responses to a
recombinant glycoprotein 120 vaccine and incidence of HIV-
Eefei Chen, Trevor E. Swartz, Roberto A. Bogomolni and
David S. Kliger, A LOV Story: The Signaling State of the
Phot1 LOV2 Photocycle Involves Chromophore-Triggered
Protein Structure Relaxation, As Probed by Far-UV TimeResolved Optical Rotatory Dispersion Spectroscopy, Biochemistry, 46, 4619-4624 (2007).
John M. Christie, Stephanie B. Corchnoy, Trevor E.
Swartz, Mark Hokenson, In-Seob Han, Winslow R. Briggs
1
and Roberto A. Bogomolni, Steric Interactions Stabilize the
Signaling State of the LOV2 Domain of Phototropin 1, Biochemistry, 46, 9310-9319 (2007).
Winslow R. Briggs, Tong-Seung Tseng, Hae-Young Cho,
Trevor E. Swartz, Stuart Sullivan, Roberto A. Bogomolni,
Eirini Kaiserli and John M. Christie, Phototropins and their
LOV domains: versatile plant blue-light receptors, J. Integr.
Plant Biol, 49, 4-10 (2007).
Trevor E. Swartz, Tong-Seung Tseng, Marcus A. Frederickson, Gaston Paris, Diego J. Comerci, Gireesh Rajashekara, Jung-Gun Kim, Mary Beth Mudgett, Gary A. Splitter,
Rodolfo A. Ugalde, Fernando A. Goldbaum, Winslow R.
Briggs and Roberto A. Bogomolni, Blue-Light-Activated
Histidine Kinases: Two-Component Sensors in Bacteria, Science (Washington, DC, U. S.), 317, 1090-1093 (2007).
BRASLAU, REBECCA (b.1959) Associate Professor.
B.A, 1982, Reed College; Ph.D, 1989, University of
Wisconsin, Madison. Postdoctoral Fellowship with Dr.
Bernd Giese, 1989-1991, Institut für Organische Chemie,
Universität Basel, Switzerland. Materials Chemistry; Organic Chemistry. Organic synthesis, development of new
synthetic methodologies, organic free radical chemistry,
nitroxides, profluorescent nitroxides, nitroxide-mediated
free radical polymerization, telechelic polymers; development of sensors and designed materials for biomedical
and nanotechnological applications. TEL: (831) 4593087 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/braslau.html
Email: braslau@chemistry.ucsc.edu
Jianfei Jiang, Igor Kurnikov, Natalia A. Belikova, Jingbo
Xiao, Qing Zhao, Andrew A. Amoscato, Rebecca Braslau,
Armido Studer, Mitchell P. Fink, Joel S. Greenberger, Peter
Wipf and Valerian E. Kagan, Structural requirements for optimized delivery, inhibition of oxidative stress, and antiapoptotic activity of targeted nitroxides, J. Pharmacol. Exp. Ther,
320, 1050-1060 (2007).
Jean Ruehl and Rebecca Braslau, A bidirectional ATRPNMRP initiator: the effect of nitroxide size on the rate of nitroxide-mediated polymerization, J. Polym. Sci., Part A: Polym. Chem, 45, 2015-2025 (2007).
Nicole L. Hill and Rebecca Braslau, Synthesis of arylethylfunctionalized N-alkoxyamine initiators and use in nitroxidemediated radical polymerization, J. Polym. Sci., Part A: Polym. Chem, 45, 2341-2349 (2007).
Greg O’Bryan, Aaron Nilsen and Rebecca Braslau, Ketone
Functionalized Nitroxides: Synthesis, Evaluation of N-Alkoxyamine Initiators, and Derivatization of Polymer Termini,
Macromolecules (Washington, DC, U. S.), 40, 7848-7854
(2007).
Jean Ruehl, Aaron Nilsen, Stephen Born, Praveen Thoniyot, Li-Ping Xu, Shaowei Chen and Rebecca Braslau, Nitroxide-mediated polymerization to form symmetrical ABA triblock copolymers from a bidirectional alkoxyamine initiator,
Polymer, 48, 2564-2571 (2007).
J. Ruehl, N. Ningnuek, T. Thongpaisanwong and R. Braslau, Cyclic alkoxyamines for nitroxide mediated radical polymerization, J. Polym. Sci., Part A: Polym. Chem, 49, 80498069 (2008).
Jean Ruehl, Nicole L. Hill, Eric D. Walter, Glenn Millhauser and Rebecca Braslau, A Proximal Bisnitroxide Initiator:
Studies in Low-Temperature Nitroxide-Mediated Polymerizations, Macromolecules (Washington, DC, U. S.), 41, 19721982 (2008).
G. O’Bryan, N. Ningnuek and R. Braslau, Cyclization of
␣-␻ heterotelechelic polystyrene prepared by nitroxide-mediated radical polymerization, Polymer, 49, 5241-5248 (2008).
J. Ruehl, C. Morimoto, D. J. Stevens, G. Millhauser and R.
Braslau, Carboxylic acid and hydroxy-functionalized alkoxyamine initiators for nitroxide mediated radical polymerization, React. Funct. Polym, 68, 1563-1577 (2008).
N. L. Hill, J. L. Jarvis, F. Pettersson and R. Braslau, Synthesis of thiol-derivatized initiators for nitroxide-mediated
radical polymerization: Reversible disulfide formation,
React. Funct. Polym, 68, 361-368 (2008).
Wilson Chau, Rushia Turner and Rebecca Braslau, Ketone
␻-functionalization of polymers prepared by nitroxide-mediated polymerization via addition to a benzyl enol ether,
React. Funct. Polym, 68, 396-405 (2008).
MariEllen Cottman, Optimization of a fluorescent detection method for urushiol. (M)
Wilson Chau, Functionalization of polymers prepared by
nitroxide mediated polymerization. (M)
Gregory J. O’Bryan, Preparation of telechelic polymers via
nitroxide mediated polymerization. (D)
Jean K. Ruehl, Alkoxyamine initiators for nitroxide mediated radical polymerization: Synthesis, characterization, and
applications. (D)
Nicole Hill, Development of novel functionalized bis-nitroxide initiators for the preparation of designed polymers.
(D)
BRULAND, KENNETH (b.1946) Professor. B.A,
1968, Western Washington State College; Ph.D, 1974,
University of California, San Diego. Marine Science.
Marine geochemistry of trace elements and radionuclides. TEL: (831) 459-4587 FAX: (831) 459-4882
Web: oceansci.ucsc.edu/faculty/bruland.html
2
CALIFORNIA, SANTA CRUZ
Email: bruland@ucsc.edu
F. J. Black, K. W. Bruland and A. R. Flegal, Competing ligand exchange-solid phase extraction method for the determination of the complexation of dissolved inorganic mercury
(II) in natural waters, Anal. Chim. Acta, 598, 318-333 (2007).
K. Johnson, E. Boyle, K. Bruland, K. Coale, C. Measures,
J. Moffett, A. Aguilar-Islas, K. Barbeau, B. Bergquist, A.
Bowie, K. Buck, Y. Cai, Z. Chase, J. Cullen, T. Doi, V. Elrod, S. Fitzwater, M. Gordon, A. King, P. Laan, L. Baquer,
W. Landing, M. Lohan, J. Mendez, A. Milne, H. Obata, L.
Ossiander, J. Plant, G. Sarthou, P. Sedwick, G. Smith, B.
Sohst, S. Tanner, S. Van den Berg and J. Wu, Developing
standards for dissolved iron in seawater, EOS, 8, 131-132
(2007).
K. N. Buck and K. W. Bruland, The physico-chemical speciation of dissolved iron in the Bering Sea, Alaska, Limnology and Oceanography, 52, 1800-1808 (2007).
K. N. Buck, M. C. Lohan, C. J. M. Berger and K. W. Bruland, Dissolved iron speciation in two distinct river plumes
and an estuary: Implications for riverine iron supply, Limnology and Oceanography, 52, 843-855 (2007).
M. P. Hurst and K. W. Bruland, An investigation into the
exchange of iron and zinc between soluble, colloidal, and
particulate size-fractions in shelf waters using low-abundance isotopes as tracers in shipboard incubation experiments, Marine Chemistry, 103, 211-226 (2007).
A. M. Aguilar-Islas, M. P. Hurst, K. N. Buck, B. Sohst, G.
J. Smith, M. C. Lohan and K. W. Bruland, Micro- and macronutrients in the southeastern Bering Sea: Insight into ironreplete and iron-deplete regimes, Progress in Oceanography,
73, 99-126 (2007).
M. C. Lohan and K. W. Bruland, Elevated Fe(II) and dissolved Fe in hypoxic shelf waters off Oregon and Washington: An enhanced source of iron to coastal upwelling regimes, Environ. Sci, Technol, 42, 6461-6468 (2008).
M. P. Hurst and K. W. Bruland, The effects of the San
Francisco Bay plume on trace metal and nutrient distributions in the Gulf of the Farallones, Geochimica and Cosmochimica, 72, 395-411 (2008).
K. W. Bruland, M. C. Lohan, A. M. Aguilar-Islas, G. J.
Smith, B. Sohst and A. Baptista, Factors influencing the
chemistry of the near-field Columbia River plume: nitrate, silicic acid, dissolved Fe and dissolved Mn, J. Geophys. Res.:
Oceans, 113 (2008).
C. J. M. Berger, S. M. Lippiatt, M. G. Lawrence and K. W.
Bruland, The application of a chemical leach technique for
estimating labile particulate aluminum, iron, and manganese
in the Columbia River plume and coastal waters off Oregon
and Washington, J. Geophys. Res.: Oceans, 113 (2008).
M. T. Brown and K. W. Bruland, An improved flow injection analysis method for the determination of dissolved aluminum in seawater, Limnology and Oceanography: Methods,
6, 87-95 (2008).
Ana Aguilar-Islas, Sources and processes controlling dissolved manganese in the eastern boundary regions of the
North Pacific and Bering Sea, and an insight into the iron-replete and iron-deplete regimes of the Bering Sea. (D)
CAMPS, MANEL (b.1970) Assistant Professor. M.S,
1994, Autonomous University Barcelona; Ph.D, 2001,
Stanford University. Research Fellow, 2001-2004, Univ.
of Washington; Acting Instructor, 2004-2007, Univ. of
Washington. Biomedical Engineering. Study of biological consequences of mutation, with emphasis on adaptation (ie generation of novel biochemical activities). Directed enzyme evolution of extended-spectrum beta-lactamase. Role of DNA polymerase I in DNA repair and
ColE1 plasmid replication. TEL: (831) 459-5396 FAX:
(831) 459-3524
Web: www.etox.ucsc.edu/fac_res/camps_lab.html
Email: mcamps@ucsc.edu
Manel Camps and Lawrence A. Loeb, Critical role of Rloops in processing replication blocks, Frontiers in Bioscience, 10, 689-698 (2005).
Manel Camps, Asael Herman, Ern Loh and Lawrence A.
Loeb, Genetic constraints on protein evolution, Crit. Rev.
Biochem. Mol. Biol, 42, 313-326 (2007).
Tam T. Van, Seon-Kyeong Kim, Manel Camps, John C.
Boothroyd and Laura J. Knoll, The BSR4 protein is up-regulated in Toxoplasma gondii bradyzoites, however the dominant surface antigen recognized by the P36 monoclonal antibody is SRS9, Int. J. Parasitol, 37, 877-885 (2007).
CHEN, SHAOWEI (b.1968) Associate Professor. B.S,
1991, University of Science and Technology of China;
M.S, 1993, Cornell University; Ph.D, 1996, Cornell University. Research Associate, 1996-1998, University of
North Carolina. Chapel Hill. Electrochemistry; Materials
Chemistry. Synthesis, characterization and manipulation
of novel functional nanomaterials, their long-range ordered assemblies and related nanoscale electron-transfer,
applications in fuel cells, photovoltaics and electronic
devices. TEL: (831) 459-5841 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/chen.html
Email: schen@chemistry.ucsc.edu
Sulolit Pradhan, Li-Ping Xu and Shaowei Chen, Janus nanoparticles by interfacial engineering, Adv. Funct. Mater, 17,
2385 (2007).
Wei Chen, Debraj Ghosh, Jia Sun, Moony C. Tong,
Fengjun Deng and Shaowei Chen, Dithiocarbamate-protected
ruthenium
nanoparticles:
Synthesis,
spectroscopy,
electrochemistry and STM studies, Electrochim. Acta, 53,
1150-1156 (2007).
Sulolit Pradhan, Debraj Ghosh, Li-Ping Xu and Shaowei
Chen, Interparticle Charge Transfer Mediated by ␲-␲ Stacking of Aromatic Moieties, J. Am. Chem. Soc, 129, 1062210623 (2007).
Shaowei Chen, Discrete charge transfer in nanoparticle
solid films, J. Mater. Chem, 17, 4115-4121 (2007).
Wei Chen, Jaemin Kim, Li-Ping Xu, Shouheng Sun and
Shaowei Chen, Langmuir-Blodgett Thin Films of Fe20Pt80
Nanoparticles for the Electrocatalytic Oxidation of Formic
Acid, J. Phys. Chem. C, 111, 13452-13459 (2007).
Wei Chen, Jaemin Kim, Shouheng Sun and Shaowei Chen,
Composition Effects of FePt Alloy Nanoparticles on the
Electro-Oxidation of Formic Acid, Langmuir, 23, 1130311310 (2007).
Li-Ping Xu, Sulolit Pradhan and Shaowei Chen, Adhesion
Force Studies of Janus Nanoparticles, Langmuir, 23, 85448548 (2007).
Fengjun Deng and Shaowei Chen, Electrochemical Quartz
Crystal Microbalance Studies of the Rectified Quantized
Charging of Gold Nanoparticle Multilayers, Langmuir, 23,
936-941 (2007).
Jean Ruehl, Aaron Nilsen, Stephen Born, Praveen Thoniyot, Li-Ping Xu, Shaowei Chen and Rebecca Braslau, Nitroxide-mediated polymerization to form symmetrical ABA triblock copolymers from a bidirectional alkoxyamine initiator,
Polymer, 48, 2564-2571 (2007).
Shaowei Chen, Li-Ping Xu, Sulolit Pradhan and Wei Chen,
Temperature-modulated scanning tunneling spectroscopy of
gold nanoparticle dropcast films, Solid State Commun, 144,
124-127 (2007).
Eric P. Lee, Zhenmeng Peng, Wei Chen, Shaowei Chen,
Hong Yang and Younan Xia, Electrocatalytic Properties of Pt
Nanowires Supported on Pt and W Gauzes, ACS Nano, 2,
2167-2173 (2008).
Chao Shi, He Yan, Claire Gu, Debraj Ghosh, Leo Seballos,
Shaowei Chen, Jin Z. Zhang and Bin Chen, A double substrate “sandwich” structure for fiber surface enhanced Raman
scattering detection, Appl. Phys. Lett, 92, 103107/1-103107/3
(2008).
Chao Shi, Chao Lu, Claire Gu, Lei Tian, Rebecca Newhouse, Shaowei Chen and Jin Z. Zhang, Inner wall coating
hollow core waveguide sensor based on double substrate surface enhanced raman scattering, Appl. Phys. Lett, 93, 153101
(2008).
Debraj Ghosh, Sulolit Pradhan, Wei Chen and Shaowei
Chen, Titanium Nanoparticles Stabilized by Ti-C Covalent
Bonds, Chem. Mater, 20, 1248-1250 (2008).
Debraj Ghosh and Shaowei Chen, Solid-state electronic
conductivity of ruthenium nanoparticles passivated by metalcarbon covalent bonds, Chem. Phys. Lett, 465, 115 (2008).
Wei Chen, Shaowei Chen, Feizhi Ding, Haobin Wang,
Lauren E. Brown and Joseph P. Konopelski, NanoparticleMediated Intervalence Transfer, J. Am. Chem. Soc, 130,
12156-12162 (2008).
Debraj Ghosh and Shaowei Chen, Palladium nanoparticles
passivated by metal-carbon covalent linkages, J. Mater.
Chem, 18, 755-762 (2008).
Wei Chen, Debraj Ghosh and Shaowei Chen, Large-scale
electrochemical synthesis of SnO2 nanoparticles, J. Mater.
Sci, 43, 5291-5299 (2008).
Tzarara Lopez-Luke, Abraham Wolcott, Li-ping Xu,
Shaowei Chen, Zhenhai Wen, Jinghong Li, Elder De La Rosa
and Jin Z. Zhang, Nitrogen-Doped and CdSe Quantum-DotSensitized Nanocrystalline TiO2 Films for Solar Energy Conversion Applications, J. Phys. Chem. C, 112, 1282-1292
(2008).
Sulolit Pradhan, Shaowei Chen, Jing Zou and Susan M.
Kauzlarich, Photoconductivity of Langmuir-Blodgett Monolayers of Silicon Nanoparticles, J. Phys. Chem. C, 112,
13292-13298 (2008).
Wei Chen, Jaemin Kim, Shouheng Sun and Shaowei Chen,
Electrocatalytic Reduction of Oxygen by FePt Alloy Nanoparticles, J. Phys. Chem. C, 112, 3891-3898 (2008).
Sulolit Pradhan, Solid state charge transfer in nanoparticle
solids. (D)
CREWS, PHILLIP (b.1943) Professor. B.S, 1966,
University of California, Los Angeles; Ph.D, 1969, University of California, Santa Barbara. NSF Postdoctoral
Fellowship, 1969-1970, Princeton University. Natural
Products Chemistry; Organic Chemistry. Application of
nuclear magnetic resonance to organic structures marine
natural products-structure determination of biologically
important substances from marine macro- and microorganisms. TEL: (831) 459-2603 FAX: (831) 459-4197
Web: www.chemistry.ucsc.edu/faculty/crews.html
Email: crewslab@chemistry.ucsc.edu
phil@chemistry.ucsc.edu
Joshua D. Deschamps, Jeffrey T. Gautschi, Stephanie
Whitman, Tyler A. Johnson, Nadine C. Gassner, Phillip
Crews and Theodore R. Holman, Discovery of platelet-type
12-human lipoxygenase selective inhibitors by high-throughput screening of structurally diverse libraries, Bioorg. Med.
Chem, 15, 6900-6908 (2007).
Xiaoyi Hu, Yongjun Dang, Karen Tenney, Phillip Crews,
Chiawei W. Tsai, Katherine M. Sixt, Philip A. Cole and Jun
O. Liu, Regulation of c-Src Nonreceptor Tyrosine Kinase
Activity by Bengamide A through Inhibition of Methionine
Aminopeptidases, Chem. Biol. (Cambridge, MA, U. S.), 14,
764-774 (2007).
Tyler A. Johnson, Karen Tenney, Robert H. Cichewicz,
Brandon I. Morinaka, Kimberly N. White, Taro Amagata,
Balanehru Subramanian, Joseph Media, Susan L. Mooberry,
Frederick A. Valeriote and Phillip Crews, Sponge-Derived
Fijianolide Polyketide Class: Further Evaluation of Their
Structural and Cytotoxicity Properties, J. Med. Chem, 50,
3795-3803 (2007).
Sarah J. Robinson, Karen Tenney, Desiree F. Yee, Lizabeth Martinez, Joseph E. Media, Frederick A. Valeriote, Rob
W. M. Van Soest and Phillip Crews, Probing the Bioactive
Constituents from Chemotypes of the Sponge Psammocinia
aff. bulbosa, J. Nat. Prod, 70, 1002-1009 (2007).
Claudia M. Boot, Nadine C. Gassner, Jennifer E. Compton,
Karen Tenney, Craig M. Tamble, R. Scott Lokey, Theodore
R. Holman and Phillip Crews, Pinpointing pseurotins from a
marine-derived Aspergillus as tools for chemical genetics using a synthetic lethality yeast screen, J. Nat. Prod, 70, 16721675 (2007).
Sarah J. Robinson, Karen Tenney, Desiree F. Yee, Lizabeth Martinez, Joseph E. Media, Frederick A. Valeriote, Rob
W. M. van Soest and Phillip Crews, Probing the bioactive
constituents from chemotypes of the sponge Psammocinia
aff. bulbosa. [Erratum to document cited in CA147:208190],
J. Nat. Prod, 70, 1690 (2007).
Paul Ralifo, Karen Tenney, Frederick A. Valeriote and
Phillip Crews, A Distinctive Structural Twist in the Aminoimidazole Alkaloids from a Calcareous Marine Sponge:
Isolation and Characterization of Leucosolenamines A and B,
J. Nat. Prod, 70, 33-38 (2007).
Nadine C. Gassner, Craig M. Tamble, Jonathan E. Bock,
Naomi Cotton, Kimberly N. White, Karen Tenney, Robert P.
St. Onge, Michael J. Proctor, Guri Giaever, Ronald W.
Davis, Phillip Crews, Theodore R. Holman and R. Scott Lokey, Accelerating the Discovery of Biologically Active Small
Molecules Using a High-Throughput Yeast Halo Assay, J.
Nat. Prod, 70, 383-390 (2007).
Ivette C. Pina, Kimberly N. White, Gustavo Cabrera, Eyleen Rivero and Phillip Crews, Bromopyrrole Carboxamide
Biosynthetic Products from the Caribbean Sponge Agelas
dispar, J. Nat. Prod, 70, 613-617 (2007).
Brent K. Rubio, Rob W. M. Van Soest and Phillip Crews,
Extending the Record of Meroditerpenes from Cacospongia
Marine Sponges, J. Nat. Prod, 70, 628-631 (2007).
Hou-Jin Li, Taro Amagata, Karen Tenney and Phillip
Crews, Additional Scalarane Sesterterpenes from the Sponge
Phyllospongia papyracea, J. Nat. Prod, 70, 802-807 (2007).
Christopher J. Wegerski, Joshua Hammond, Karen Tenney, Teatulohi Matainaho and Phillip Crews, A Serendipitous
Discovery of Isomotuporin-Containing Sponge Populations
of Theonella swinhoei, J. Nat. Prod, 70, 89-94 (2007).
Paul Ralifo, Laura Sanchez, Nadine C. Gassner, Karen
Tenney, R. Scott Lokey, Theodore R. Holman, Frederick A.
Valeriote and Phillip Crews, Pyrroloacridine Alkaloids from
Plakortis quasiamphiaster: Structures and Bioactivity, J. Nat.
Prod, 70, 95-99 (2007).
Jeffrey T. Gautschi, Karen Tenney, Jennifer Compton and
Phillip Crews, Chemical investigations of a deep water marine-derived fungus: Simple amino acid derivatives from an
Arthrinium sp, Nat. Prod. Commun, 2, 541-546 (2007).
Claudia M. Boot, Taro Amagata, Karen Tenney, Jennifer
E. Compton, Halina Pietraszkiewicz, Frederick A. Valeriote
and Phillip Crews, Four classes of structurally unusual peptides from two marine-derived fungi: Structures and bioactivities, Tetrahedron, 63, 9903-9914 (2007).
Taro Amagata, Tyler A. Johnson, Robert H. Cichewicz,
Karen Tenney, Susan L. Mooberry, Joseph Media, Matthew
Edelstein, Frederick A. Valeriote and Phillip Crews, Interrogating the Bioactive Pharmacophore of the Latrunculin Chemotype by Investigating the Metabolites of Two Taxonomically Unrelated Sponges, J. Med. Chem, 51, 7234-7242
(2008).
Brent K. Rubio, Sarah J. Robinson, Claudia E. Avalos,
Frederick A. Valeriote, Nicole J. de Voogd and Phillip
Crews, Revisiting the Sponge Sources, Stereostructure, and
Biological Activity of Cyclocinamide A, J. Nat. Prod, 71,
1475-1478 (2008).
Tyler A. Johnson, Taro Amagata, Allen G. Oliver, Karen
Tenney, Frederick A. Valeriote and Phillip Crews, The
Unexpected Isolation of CTP-431, a Novel Thiopyrone from
the Sponge Cacospongia mycofijiensis, J. Org. Chem, 73,
7255-7259 (2008).
Kimberly N. White, Taro Amagata, Allen G. Oliver, Karen
Tenney, Philip J. Wenzel and Phillip Crews, Structure Revision of Spiroleucettadine, a Sponge Alkaloid with a Bicyclic
Core Meager in H-Atoms, J. Org. Chem, 73, 8719-8722
(2008).
Brent Rubio, Bioactive natural products for global health
from Papua New Guinea marine sponges. (D)
Christopher Wegerski, Chemistry under the sea: Secondary
metabolites from marine sponges of Papua New Guinea. (D)
DEAMER, DAVID W. (b.1939) Professor Emeritus.
B.S, 1961, Duke University; Ph.D, 1965, Ohio State University. NIH Fellowship, 1965-1967, University of Cali-
CALIFORNIA, SANTA CRUZ
fornia, Berkeley. Biophysics/Biophysical Chemistry;
Nanochemistry. Membrane biophysics. TEL: (831) 4595158 FAX: (831) 459-5158
Web: www.chemistry.ucsc.edu/faculty/deamer.html
Email: deamer@chemistry.ucsc.edu
Bernd R. T. Simoneit, Ahmed I. Rushdi and David W.
Deamer, Abiotic formation of acylglycerols under simulated
hydrothermal conditions and self-assembly properties of such
lipid products, Adv. Space Res, 40, 1649-1656 (2007).
David W. Deamer, Reay Dick, Wolfram Thiemann and
Meir Shinitzky, Intrinsic asymmetries of amino acid enantiomers and their peptides: a possible role in the origin of biochirality, Chirality, 19, 751-763 (2007).
Dongliang Yin, Evan J. Lunt, Mikhail I. Rudenko, David
W. Deamer, Aaron R. Hawkins and Holger Schmidt, Planar
optofluidic chip for single particle detection, manipulation,
and analysis, Lab Chip, 7, 1171-1175 (2007).
Seico Benner, Roger J. A. Chen, Noah A. Wilson, Robin
Abu-Shumays, Nicholas Hurt, Kate R. Lieberman, David W.
Deamer, William B. Dunbar and Mark Akeson, Sequencespecific detection of individual DNA polymerase complexes
in real time using a nanopore, Nat. Nanotechnol, 2, 718-724
(2007).
Helmut Zepik, Sudha Rajamani, Marie-Christine Maurel
and David Deamer, Oligomerization of thioglutamic acid:
Encapsulated reactions and lipid catalysis, Orig. Life Evol.
Biosph, 37, 495-505 (2007).
Robert M. Hazen and David W. Deamer, Hydrothermal
Reactions of Pyruvic Acid: synthesis, Selection, and Self-Assembly of Amphiphilic Molecules, Origins Life Evol. Biospheres, 37, 143-152 (2007).
Pierre-Alain Monnard, Andrej Luptak and David W.
Deamer, Models of primitive cellular life: polymerases and
templates in liposomes, Philos. Trans. R. Soc., B, 362, 17411750 (2007).
Daniel Branton, David W. Deamer, Andre Marziali, Hagan
Bayley, Steven A. Benner, Thomas Butler, Massimiliano Di
Ventra, Slaven Garaj, Andrew Hibbs, Xiaohua Huang, Stevan B. Jovanovich, Predrag S. Krstic, Stuart Lindsay, Xinsheng Sean Ling, Carlos H. Mastrangelo, Amit Meller, John S.
Oliver, Yuriy V. Pershin, J. Michael Ramsey, Robert Riehn,
Gautam V. Soni, Vincent Tabard-Cossa, Meni Wanunu, Matthew Wiggin and Jeffery A. Schloss, The potential and challenges of nanopore sequencing, Nat. Biotechnol, 26, 11461153 (2008).
Sudha Rajamani, Alexander Vlassov, Seico Benner, Amy
Coombs, Felix Olasagasti and David Deamer, Lipid-assisted
synthesis of RNA-like polymers from mononucleotides,
Orig. Life Evol. Biosph, 38, 57-74 (2008).
Trishool Namani and David W. Deamer, Stability of Model Membranes in Extreme Environments, Origins Life Evol.
Biospheres, 38, 329-341 (2008).
EINARSDOTTIR, OLOF (b.1956) Professor. B.S,
1980, University of Iceland, Reykjavik, Iceland; Ph.D,
1986, Colorado State University. Director’s Postdoctoral
Fellow, 1986-1988, Los Alamos National Laboratory.
Bioinorganic Chemistry; Biophysics/Biophysical Chemistry. Bioenergetics; heme-copper oxidases; the mechanism of electron transfer and proton translocation in respiration; exploration of photodissociable synthetic and
biological O2 and NO carriers; synthesis and characterization of chemical analogs of the active site of cytochrome oxidase. TEL: (831) 459-3155 FAX: (831) 4592935
Web: www.chemistry.ucsc.edu/faculty/einarsdottir.html
Email: olof@chemistry.ucsc.edu
I. Szundi, J. Ray and Ó. Einarsdóttir, Flash photolysis of
fully reduced and mixed-valence co-bound rhodobacter
sphaeroides cytochrome c oxidase: Heme-heme spectral
shifts, Biochemistry, 46, 12568-12578 (2007).
K. N. White, I. Sen, I. Szundi, Y. R. Landaverry, L. E.
Bria, J. P. Konopelski, M. M. Olmstead and Ó. Einarsdóttir,
Synthesis and structural characterization of cross-linked histidine-phenol Cu(II)-complexes as models for the active site
of cytochrome C oxidase, Chem. Commun, 31, 3252-3254
(2007).
William J. McDonald and Olof Einarsdottir, Solvent Effects on the Vibrational Frequencies of the Phenolate Anion,
the para-Cresolate Anion, and Their Radicals, J. Phys. Chem.
A, 112, 11400-11413 (2008).
FLEGAL, A. RUSSELL (b.1946) Professor. B.A,
1968, University of California Santa Barbara; M.S, 1976,
California State University East Bay; Ph.D, 1979, Oregon State University. Research Fellow, 1979-1980, California Insitute of Technology. Environmental Chemistry;
Toxicology. Biochemical cycles of trace elements, stable
lead isotope geochemistry, mercury speciation and complexation. TEL: (831) 459-2093 FAX: (831) 459-3524
Web: www.etox.ucsc.edu/fac_res/flegal.html
Email: flegal@metx.ucsc.edu
Kuria Ndung’u, Sharon Hibdon and A. Russell Flegal,
Lead in vinegar: determination and possible sources, Am.
Lab. (Shelton, CT, U. S.), 39, 30,32,34 (2007).
Frank J. Black, Kenneth W. Bruland and A. Russell Flegal,
Competing ligand exchange-solid phase extraction method
for the determination of the complexation of dissolved inor-
3
ganic mercury (II) in natural waters, Anal. Chim. Acta, 598,
318-333 (2007).
Miguel Angel Huerta-Diaz, Ignacio Rivera-Duarte, Sergio
A. Sanudo-Wilhelmy and A. Russell Flegal, Comparative
distributions of size fractionated metals in pore waters sampled by in situ dialysis and whole-core sediment squeezing:
implications for diffusive flux calculations, Appl. Geochem,
22, 2509-2525 (2007).
Kristen N. Buck, John R. M. Ross, A. Russell Flegal and
Kenneth W. Bruland, A review of total dissolved copper and
its chemical speciation in San Francisco Bay, California, Environ. Res, 105, 5-19 (2007).
Christopher H. Conaway, John R. M. Ross, Richard Looker, Robert P. Mason and A. Russell Flegal, Decadal mercury
trends in San Francisco Estuary sediments, Environ. Res,
105, 53-66 (2007).
Allison C. Luengen, Peter T. Raimondi and A. Russell Flegal, Contrasting biogeochemistry of six trace metals during
the rise and decay of a spring phytoplankton bloom in San
Francisco Bay, Limnol. Oceanogr, 52, 1112-1130 (2007).
Celine Gallon, Jugdeep Aggarwal and A. Russell Flegal,
Comparison of Mass Discrimination Correction Methods and
Sample Introduction Systems for the Determination of Lead
Isotopic Composition Using a Multicollector Inductively
Coupled Plasma Mass Spectrometer, Anal. Chem. (Washington, DC, U. S.), 80, 8355-8363 (2008).
Christopher H. Conaway, Frank J. Black, Thomas M.
Grieb, Sujoy Roy and A. Russell Flegal, Mercury in the San
Francisco Estuary, Rev. Environ. Contam. Toxicol, 194, 2954 (2008).
and Theodore R. Holman, Substrate Specificity Changes for
Human Reticulocyte and Epithelial 15-Lipoxygenases Reveal
Allosteric Product Regulation, Biochemistry, 47, 7364-7375
(2008).
Ritimukta Sarangi, Rosalie K. Hocking, Michael L. Neidig, Maurizio Benfatto, Theodore R. Holman, Edward I. Solomon, Keith O. Hodgson and Britt Hedman, Geometric Structure Determination of N694C Lipoxygenase: A Comparative
Near-Edge X-Ray Absorption Spectroscopy and Extended XRay Absorption Fine Structure Study, Inorg. Chem. (Washington, DC, U. S.), 47, 11543-11550 (2008).
Klaus van Leyen, Ken Arai, Guang Jin, Victor Kenyon,
Bettina Gerstner, Paul A. Rosenberg, Theodore R. Holman
and Eng H. Lo, Novel lipoxygenase inhibitors as neuroprotective reagents, J. Neurosci. Res, 86, 904-909 (2008).
Allison Christine Luengen, Investigating the spring bloom
in San Francisco Bay: Links between water chemistry, metal
cycling, mercury speciation and phytoplankton community
composition. (D)
Frank J. Black, Method for investigating the complexation
of inorganic mercury, and factors controlling the photo-degration of monomethyl mercury in natural waters. (D)
Eefei Chen, Christina J. Abel, Robert A. Goldbeck and David S. Kliger, Non-Native Heme-Histidine Ligation Promotes
Microsecond Time Scale Secondary Structure Formation in
Reduced Horse Heart Cytochrome c, Biochemistry, 46,
12463-12472 (2007).
Christina J. Abel, Robert A. Goldbeck, Ramil F. Latypov,
Heinrich Roder and David S. Kliger, Conformational Equilibration Time of Unfolded Protein Chains and the Folding
Speed Limit, Biochemistry, 46, 4090-4099 (2007).
Eefei Chen, Trevor E. Swartz, Roberto A. Bogomolni and
David S. Kliger, A LOV Story: The Signaling State of the
Phot1 LOV2 Photocycle Involves Chromophore-Triggered
Protein Structure Relaxation, As Probed by Far-UV TimeResolved Optical Rotatory Dispersion Spectroscopy, Biochemistry, 46, 4619-4624 (2007).
Elsa C. Y. Yan, Jacqueline Epps, James W. Lewis, Istvan
Szundi, Aditi Bhagat, Thomas P. Sakmar and David S. Kliger, Photointermediates of the Rhodopsin S186A Mutant as a
Probe of the Hydrogen-Bond Network in the Chromophore
Pocket and the Mechanism of Counterion Switch, J. Phys.
Chem. C, 111, 8843-8848 (2007).
Eefei Chen, Vanessa Van Vranken and David S. Kliger,
The folding kinetics of the SDS-induced molten globule form
of reduced cytochrome c, Biochemistry, 47, 5450-5459
(2008).
Raymond M. Esquerra, Russell A. Jensen, Shyam Bhaskaran, Marlisa L. Pillsbury, Juan L. Mendoza, Benjamin W.
Lintner, David S. Kliger and Robert A. Goldbeck, The pH
Dependence of Heme Pocket Hydration and Ligand Rebinding Kinetics in Photodissociated Carbonmonoxymyoglobin,
J. Biol. Chem, 283, 14165-14175 (2008).
Terrie M. Williams, Mary Zavanelli, Melissa A. Miller,
Robert A. Goldbeck, Michael Morledge, Dave Casper, D.
Ann Pabst, William McLellan, Lucas P. Cantin and David S.
Kliger, Running, swimming and diving modifies neuroprotecting globins in the mammalian brain, Proc. R. Soc. B, 275,
751-758 (2008).
HOLMAN, THEODORE R. (b.1963) Professor.
B.A, 1986, University of California, San Diego; Ph.D,
1991, University of Minneapolis, Minneapolis. Helen
Hay Whitney Foundation Postdoctoral Fellowship, 1992,
Harvard Medical School; Postdoctoral Fellowship, 1994,
University of California, San Francisco. Biochemistry;
Bioinorganic Chemistry. Use of biochemistry and inorganic chemistry to probe the biological function of metalloproteins from a rigorous chemical perspective. Current areas are structure/function and inhibitor studies of
soybean and human lipoxygenases. TEL: (831) 459-5884
FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/holman.html
Email: tholman@chemistry.ucsc.edu
Alisha M. Thompson, Amit R. Reddi, Xiaoli Shi, Robert
A. Goldbeck, Pierre Moeenne-Loccoz, Brian R. Gibney and
Theodore R. Holman, Measurement of the Heme Affinity for
Yeast Dap1p, and Its Importance in Cellular Function, Biochemistry, 46, 14629-14637 (2007).
Joshua D. Deschamps, Jeffrey T. Gautschi, Stephanie
Whitman, Tyler A. Johnson, Nadine C. Gassner, Phillip
Crews and Theodore R. Holman, Discovery of platelet-type
12-human lipoxygenase selective inhibitors by high-throughput screening of structurally diverse libraries, Bioorg. Med.
Chem, 15, 6900-6908 (2007).
Yesseny Vasquez-Martinez, Rachana V. Ohri, Victor Kenyon, Theodore R. Holman and Silvia Sepulveda-Boza, Structure-activity relationship studies of flavonoids as potent inhibitors of human platelet 12-hLO, reticulocyte 15-hLO-1,
and prostate epithelial 15-hLO-2, Bioorg. Med. Chem, 15,
7408-7425 (2007).
Michael L. Neidig, Aaron T. Wecksler, Gerhard Schenk,
Theodore R. Holman and Edward I. Solomon, Kinetic and
Spectroscopic Studies of N694C Lipoxygenase: A Probe of
the Substrate Activation Mechanism of a Nonheme Ferric
Enzyme, J. Am. Chem. Soc, 129, 7531-7537 (2007).
Claudia M. Boot, Nadine C. Gassner, Jennifer E. Compton,
Karen Tenney, Craig M. Tamble, R. Scott Lokey, Theodore
R. Holman and Phillip Crews, Pinpointing pseurotins from a
marine-derived Aspergillus as tools for chemical genetics using a synthetic lethality yeast screen, J. Nat. Prod, 70, 16721675 (2007).
Nadine C. Gassner, Craig M. Tamble, Jonathan E. Bock,
Naomi Cotton, Kimberly N. White, Karen Tenney, Robert P.
St. Onge, Michael J. Proctor, Guri Giaever, Ronald W.
Davis, Phillip Crews, Theodore R. Holman and R. Scott Lokey, Accelerating the Discovery of Biologically Active Small
Molecules Using a High-Throughput Yeast Halo Assay, J.
Nat. Prod, 70, 383-390 (2007).
Paul Ralifo, Laura Sanchez, Nadine C. Gassner, Karen
Tenney, R. Scott Lokey, Theodore R. Holman, Frederick A.
Valeriote and Phillip Crews, Pyrroloacridine Alkaloids from
Plakortis quasiamphiaster: Structures and Bioactivity, J. Nat.
Prod, 70, 95-99 (2007).
Cyril Jacquot, Aaron T. Wecksler, Chris M. McGinley, Erika N. Segraves, Theodore R. Holman and Wilfred A. van
der Donk, Isotope Sensitive Branching and Kinetic Isotope
Effects in the Reaction of Deuterated Arachidonic Acids with
Human 12- and 15-Lipoxygenases, Biochemistry, 47, 72957303 (2008).
Aaron T. Wecksler, Victor Kenyon, Joshua D. Deschamps
Alisha M. Thompson, Biochemical characterization of the
heme binding protein dap1p. (D)
KLIGER, DAVID S. (b.1943) Professor. B.S, 1965,
Rutgers University; Ph.D, 1970, Cornell University.
Postdoctoral Fellowship, 1970-1971, Harvard University. Biophysics/Biophysical Chemistry; Photochemistry.
Time-resolved spectroscopic studies of transient species;
photochemistry; biophysics; studies of the mechanism of
visual transduction and heme protein functions; protein
and peptide folding. TEL: (831) 459-2106 FAX: (831)
459-2760
Web: www.chemistry.ucsc.edu/faculty/kliger.html
Email: kliger@chemistry.ucsc.edu
Jacqueline Epps, Effects pf different environments on rhodopsin photochemistry. (D)
KONOPELSKI, JOSEPH P. (b.1951) Professor.
B.A, 1973, The Johns Hopkins University; M.A, 1973,
The Johns Hopkins University; Ph.D, 1980, Stanford
University. Postdoctoral Fellowship, 1981, Universite
Louis Pasteur, Strasbourg, France; U.S.-France Exchange of Scientist Fellow, 1982, Universite Louis Pasteur, Strasbourg, France; Postdoctoral Fellowship, 19831984, University of Pennsylvania. Organic Chemistry;
Synthesis. Natural products synthesis and synthetic methodology; asymmetric synthesis; heterocyclic chemistry;
bioorganic chemistry. TEL: (831) 459-4676 FAX: (831)
459-2935
Web: www.chemistry.ucsc.edu/faculty/konopelski.html
Email: joek@chemistry.ucsc.edu
Kimberly N. White, Indranil Sen, Istvan Szundi, Yakira R.
Landaverry, Lauren E. Bria, Joseph P. Konopelski, Marilyn
M. Olmstead and Oloef Einarsdottir, Synthesis and structural
characterization of cross-linked histidine-phenol Cu(II) complexes as cytochrome c oxidase active site models, Chem.
Commun. (Cambridge, U. K.), 3252-3254 (2007).
Jibo Xia, Lauren E. Brown and Joseph P. Konopelski,
Welwistatin Support Studies: Expansion and Limitation of
Aryllead(IV) Coupling Reactions, J. Org. Chem, 72, 68856890 (2007).
Wei Chen, Shaowei Chen, Feizhi Ding, Haobin Wang,
Lauren E. Brown and Joseph P. Konopelski, NanoparticleMediated Intervalence Transfer, J. Am. Chem. Soc, 130,
12156-12162 (2008).
4
CALIFORNIA, SANTA CRUZ
Brian S. Gerstenberger, Jinzhen Lin, Yvette S. Mimieux,
Lauren E. Brown, Allen G. Oliver and Joseph P. Konopelski,
Structural Characterization of an Enantiomerically Pure Amino Acid Imidazolide and Direct Formation of the ␤-Lactam
Nucleus from an ␣-Amino Acid, Org. Lett, 10, 369-372
(2008).
Jinzhen Lin, Brian S. Gerstenberger, Nhu Y. T. Stessman
and Joseph P. Konopelski, Diazonamide Support Studies:
Stereoselective Formation of the C10 Chiral Center in both
the CDEFG and AEFG Fragments, Org. Lett, 10, 3969-3972
(2008).
Brian S. Gerstenberger, Progress towards the total synthesis of diazonamide a and related new methodology. (D)
Jibo Xia, Progress toward the total synthesis of N-methylwelwitindolinone C isothiocyanate: Expansion and limitation
of aryllead(IV) coupling reactions. (D)
Yakira R. Landaverry, Histidine-tyrosine side chain bonding: 1) Synthesis of cytochrome C oxidase active site model
systems. 2) Synthetic methodology for the synthesis of the
core histidine-tyrosine dipeptide assembly of the natural
products aciculitins A-C, progress towa. (D)
LI, YAT (b.1977) Assistant Professor. B.Sc, 1999, The
University of Hong Kong; Ph.D, 2002, The University of
Hong Kong. Postdoctoral Fellow, 2003-2007, Harvard
University. Nanochemistry; Solid State Chemistry. Semiconductor nanowires and nanowire heterostructures;
Metal-Organic Chemical Vapor Deposition (MOCVD)
and Chemical Vapor Deposition (CVD); nanophotonics:
nanowire-based multicolor light emitting and laser
diodes; nanoelectronics: nanoscale field-effect transistors
and high electron mobility transistors. TEL: (831) 4591952 FAX: (831) 459-2935
Web: chemistry.ucsc.edu/faculty/Li
Email: yli@chemistry.ucsc.edu
Andrew B. Greytak, Carl J. Barrelet, Yat Li and Charles
M. Lieber, Semiconductor nanowire laser and nanowire
waveguide electro-optic modulators, Appl. Phys. Lett, 87,
151103 (2005).
Silvija Gradecak, Fang Qian, Yat Li, Hong-Gyu Park and
Charles M. Lieber, GaN nanowire lasers with low lasing
thresholds, Appl. Phys. Lett, 87, 173111 (2005).
Fang Qian, Silvija Gradecak, Yat Li, Cheng-Yen Wen and
Charles M. Lieber, Core/multishell nanowire heterostructures
as multicolor, high-efficiency light-emitting diodes, Nano
Lett, 5, 2287-2291 (2005).
Yat Li, Fang Qian, Jie Xiang and Charles M. Lieber, Electronic and optoelectronic properties of nanowires, Material
Today, 9, 18-27 (2006).
Yat Li, Jie Xiang, Fang Qian, Silvija Gradecak, Yue Wu,
Hao Yan, Douglas A. Blom and Charles M. Lieber, Dopantfree GaN/AlN/AlGaN radial nanowire heterostructures as
high electron mobility transistors, Nano Lett, 6, 1468-1471
(2006).
Hong-Gyu Park, Fang Qian, Carl J. Barrelet and Yat Li,
Microstadium single-nanowire laser, Appl. Phys. Lett, 91,
251115/1-251115/3 (2007).
Xiaocheng Jiang, Qihua Xiong, Sungwoo Nam, Fang Qian,
Yat Li and Charles M. Lieber, InAs/InP Radial Nanowire
Heterostructures as High Electron Mobility Devices, Nano
Lett, 7, 3214-3218 (2007).
Fang Qian, Yat Li, Silvija Gradecak, Hong-Gyu Park, Yajie Dong, Yong Ding, Zhong Lin Wang and Charles M. Lieber, Multi-quantum-well nanowire heterostructures for wavelength-controlled lasers, Nat. Mater, 7, 701-706 (2008).
LININGTON, ROGER G. (b.1975) Assistant Professor. B.Sc, 1998, University of Leeds, UK; Ph.D, 2004,
University of British Columbia, Canada. Postdoctoral
Researcher, 2005-2007, Scripps Institution of Oceanography. Chemical Biology; Organic Chemistry. Marine
natural products, drugs for neglected diseases, chemical
biology, chemical probes. TEL: (831) 459-3014 FAX:
(831) 459-2935
Web: chemistry.ucsc.edu/faculty/linington.html
Email: rogerl@chemistry.ucsc.edu
Roger G. Linington, Jose Gonzalez, Luis-David Urena,
Luz I. Romero, Eduardo Ortega-Barria and William H. Gerwick, Venturamides A and B: Antimalarial Constituents of
the Panamanian Marine Cyanobacterium Oscillatoria sp, J.
Nat. Prod, 70, 397-401 (2007).
Kerry L. McPhail, Jhonny Correa, Roger G. Linington,
Jose Gonzalez, Eduardo Ortega-Barria, Todd L. Capson and
William H. Gerwick, Antimalarial Linear Lipopeptides from
a Panamanian Strain of the Marine Cyanobacterium Lyngbya
majuscula, J. Nat. Prod, 70, 984-988 (2007).
Roger G. Linington, Daniel J. Edwards, Cynthia F. Shuman, Kerry L. McPhail, Teatulohi Matainaho and William H.
Gerwick, Symplocamide A, a Potent Cytotoxin and Chymotrypsin Inhibitor from the Marine Cyanobacterium Symploca
sp, J. Nat. Prod, 71, 22-27 (2008).
LOKEY, R. SCOTT (b.1967) Associate Professor.
B.S, 1989, Trinity University; Ph.D, 1997, University of
Texas, Austin. Post-doctoral fellow, 1997-1998, Genentech, Inc; Post-doctoral fellow, 1998-2001, Harvard
Medical School. Bioorganic Chemistry; Chemical Biology. Actin cell biology. Diversity-oriented synthesis of
cyclic peptide libraries for phenotype-based screening.
Chemical genetics. TEL: (831) 459-1307 FAX: (831)
459-2935
Web: www.chemistry.ucsc.edu/faculty/lokey.html
Email: lokey@chemistry.ucsc.edu
Laura A. Schuresko and R. Scott Lokey, A practical solidphase synthesis of Glu7-phalloidin and entry into fluorescent
F-actin-binding reagents, Angew. Chem., Int. Ed, 46, 35473549 (2007).
Michael T. Nehil, Craig M. Tamble, David J. Combs,
Douglas R. Kellogg and R. Scott Lokey, Uncovering genetic
relationships using small molecules that selectively target
yeast cell cycle mutants, Chem. Biol. Drug Des, 69, 258-264
(2007).
Claudia M. Boot, Nadine C. Gassner, Jennifer E. Compton,
Karen Tenney, Craig M. Tamble, R. Scott Lokey, Theodore
R. Holman and Phillip Crews, Pinpointing pseurotins from a
marine-derived Aspergillus as tools for chemical genetics using a synthetic lethality yeast screen, J. Nat. Prod, 70, 16721675 (2007).
Nadine C. Gassner, Craig M. Tamble, Jonathan E. Bock,
Naomi Cotton, Kimberly N. White, Karen Tenney, Robert P.
St. Onge, Michael J. Proctor, Guri Giaever, Ronald W.
Davis, Phillip Crews, Theodore R. Holman and R. Scott Lokey, Accelerating the Discovery of Biologically Active Small
Molecules Using a High-Throughput Yeast Halo Assay, J.
Nat. Prod, 70, 383-390 (2007).
Paul Ralifo, Laura Sanchez, Nadine C. Gassner, Karen
Tenney, R. Scott Lokey, Theodore R. Holman, Frederick A.
Valeriote and Phillip Crews, Pyrroloacridine Alkaloids from
Plakortis quasiamphiaster: Structures and Bioactivity, J. Nat.
Prod, 70, 95-99 (2007).
Rushia A. Turner, Allen G. Oliver and R. Scott Lokey,
Click Chemistry as a Macrocyclization Tool in the SolidPhase Synthesis of Small Cyclic Peptides, Org. Lett, 9, 50115014 (2007).
David J. Combs and R. Scott Lokey, Extended peptoids: a
new class of oligomers based on aromatic building blocks,
Tetrahedron Lett, 48, 2679-2682 (2007).
Laura Schuresko, From toadstool to test tube: A phallotoxin tale. (D)
Taha Rezai, The passive membrane permeability of cyclic
peptides. (D)
MASCHARAK, PRADIP K. (b.1953) Professor.
B.Sc.(Hons.in Chem), 1971, University of Burdwan, India; M.S. (Inorg.Chem.Special), 1973, University of
Burdwan, India; Ph.D, 1979, Indian Institute of Technology, Kanpur, India. Postdoctoral Fellowship, 1980, Stanford University; Postdoctoral Fellowship, 1981-1982,
Harvard University; Bristol-Myers Research Associate,
1983-1984, Massachusetts Institute of Technology
(MIT). Bioinorganic Chemistry; Medicinal and/or Pharmaceutical Chemistry. Synthetic analogue approach to
active sites of metalloenzymes; studies on drug-receptor
interactions at a molecular level; alkane oxidation by designed metal complexes as catalysts; synthesis of designed NO-donors for photodynamic therapy. TEL:
(408) 459-4251 FAX: (408) 459-2935
Web: www.chemistry.ucsc.edu/faculty/mascharak.html
Email: pradip@chemistry.ucsc.edu
Aura A. Eroy-Reveles, C. Gianna Hoffman-Luca and Pradip K. Mascharak, Formation of a triply bridged ␮-oxo diiron
(iii) core stabilized by two deprotonated carboxamide groups
upon photorelease of NO from a {Fe-NO}6 iron nitrosyl,
Dalton Trans, 5268-5274 (2007).
Michael J. Rose, Apurba K. Patra, Eric A. Alcid, Marylin
M. Olmstead and Pradip K. Mascharak, Ruthenium Nitrosyls
Derived from Polypyridine Ligands with Carboxamide or
Imine Nitrogen Donor(s): Isoelectronic Complexes with Different NO Photo-lability, Inorg. Chem. (Washington, DC, U.
S.), 46, 2328-2338 (2007).
Genevieve M. Halpenny, Marilyn M. Olmstead and Pradip
K. Mascharak, Incorporation of a Designed Ruthenium Nitrosyl in PolyHEMA Hydrogel and Light-Activated Delivery
of NO to Myoglobin, Inorg. Chem. (Washington, DC, U. S.),
46, 6601-6606 (2007).
Michael J. Rose, Marilyn M. Olmstead and Pradip K. Mascharak, Photosensitization via Dye Coordination: A New
Strategy to Synthesize Metal Nitrosyls That Release NO under Visible Light, J. Am. Chem. Soc, 129, 5342-5343 (2007).
Michael J. Rose, Marilyn M. Olmstead and Pradip K. Mascharak, Photoactive ruthenium nitrosyls derived from quinoline- and pyridine-based ligands: Accelerated photorelease of
NO due to quinoline ligation, Polyhedron, 26, 4713-4718
(2007).
Michael J. Rose and Pradip K. Mascharak, A photosensitive {Ru-NO}6 nitrosyl bearing dansyl chromophore: novel
NO donor with a fluorometric on/off switch, Chem. Commun. (Cambridge, U. K.), 3933-3935 (2008).
Michael J. Rose and Pradip K. Mascharak, Photoactive ruthenium nitrosyls: Effects of light and potential application
as NO donors, Coord. Chem. Rev, 252, 2093-2114 (2008).
Michael J. Rose and Pradip K. Mascharak, Fiat Lux: selective delivery of high flux of nitric oxide (NO) to biological
targets using photoactive metal nitrosyls, Curr. Opin. Chem.
Biol, 12, 238-244 (2008).
Aura A. Eroy-Reveles, Yvonne Leung, Christine M. Bea-
vers, Marilyn M. Olmstead and Pradip K. Mascharak, NearInfrared Light Activated Release of Nitric Oxide from Designed Photoactive Manganese Nitrosyls: Strategy, Design,
and Potential as NO Donors, J. Am. Chem. Soc, 130, 44474458 (2008).
Michael J. Rose, Nicole L. Fry, Rebecca Marlow, Lindsay
Hinck and Pradip K. Mascharak, Sensitization of Ruthenium
Nitrosyls to Visible Light via Direct Coordination of the Dye
Resorufin: Trackable NO Donors for Light-Triggered NO
Delivery to Cellular Targets, J. Am. Chem. Soc, 130, 88348846 (2008).
Aura Alegra Eroy-Reveles, Synthesis of photoactive manganese nitrosyl compounds and materials for the light controlled release of nitric oxide. (D)
MILLHAUSER, GLENN L. (b.1956) Professor. B.S,
1980, California State University Los Angeles; Ph.D,
1986, Cornell University. NIH Fellowship, 1988, Cornell
University. Biophysics/Biophysical Chemistry; Neuroscience. Biophysical chemistry, prions, agouti-related protein, melanocortin receptors, electron spin resonance;
time-domain ESR; nuclear magnetic resonance. TEL:
(831) 459-2176 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/millhauser.html
Email: glennm@chemistry.ucsc.edu
P. McCarthy, M. Chattopadhyay, G. L. Millhauser, N. V.
Tsarevsky, L. Bombalski, K. Matyjaszewski, D. Shimmin, N.
Avdalovic and C. Pohl, Nanoengineered analytical immobilized metal affinity chromatography stationary phase by atom
transfer radical polymerization: Separation of synthetic prion
peptides, Anal. Biochem, 366, 1-8 (2007).
Glenn L. Millhauser, Copper and the prion protein: methods, structures, function, and disease, Annu. Rev. Phys.
Chem, 58, 299-320 (2007).
Leo Seballos, Nicole Richards, Daniel J. Stevens, Mira Patel, Laura Kapitzky, Scott Lokey, Glenn Millhauser and Jin
Z. Zhang, Competitive binding effects on surface-enhanced
Raman scattering of peptide molecules, Chem. Phys. Lett,
447, 335-339 (2007).
Bin Yu and Glenn L. Millhauser, Chemical disulfide mapping identifies an inhibitor cystine knot in the agouti signaling protein, FEBS Lett, 581, 5561-5565 (2007).
Eric D. Walter, Daniel J. Stevens, Micah P. Visconte and
Glenn L. Millhauser, The Prion Protein is a Combined Zinc
and Copper Binding Protein: Zn2+ Alters the Distribution of
Cu2+ Coordination Modes, J. Am. Chem. Soc, 129, 1544015441 (2007).
Jijun Dong, Jesse D. Bloom, Vladimir Goncharov, Madhuri Chattopadhyay, Glenn L. Millhauser, David G. Lynn,
Thomas Scheibel and Susan Lindquist, Probing the Role of
PrP Repeats in Conformational Conversion and Amyloid Assembly of Chimeric Yeast Prions, J. Biol. Chem, 282, 3420434212 (2007).
Sophie I. Candille, Christopher B. Kaelin, Bruce M. Cattanach, Bin Yu, Darren A. Thompson, Matthew A. Nix, Julie
A. Kerns, Sheila M. Schmutz, Glenn L. Millhauser, Gregory
S. Barsh, C. C. Little and J. A. Kerns, A ␤-Defensin Mutation Causes Black Coat Color in Domestic Dogs, Science
(Washington, DC, U. S.), 318, 1418-1423 (2007).
C. B. Kaelin, S. I. Candille, B. Yu, P. Jackson, D. A.
Thompson, M. A. Nix, J. Binkley, G. L. Millhauser and G. S.
Barsh, New ligands for melanocortin receptors, Int. J. Obes,
32, S19-S27 (2008).
Jean Ruehl, Nicole L. Hill, Eric D. Walter, Glenn L. Millhauser and Rebecca Braslau, A proximal bisnitroxide initiator: Studies in low-temperature nitroxide-mediated polymerizations, Macromolecules, 41, 1972-1982 (2008).
Bin Yu, Scaffold study of ASIP and AgRP: Antagonists of
melanocortin system. (D)
Daniel J. Stevens, Metal binding behavior of the prion protein and relevance to disease progression. (D)
OLIVER, SCOTT R. J. (b.1969) Associate Professor.
B.Sc, 1992, University of Toronto; Ph.D, 1997, University of Toronto. NSERC Postdoctoral Fellowship, 19971999, Harvard University. Materials Chemistry; Materials Science. Nanoporous materials for catalysis; polymer
templation for dye-sensitized solar cells. TEL: (831)
459-5448 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/oliver.html
Email: soliver@chemistry.ucsc.edu
Xiaojuan Fan, David L. Rogow, Claudia H. Swanson, Akhilesh Tripathi and Scott R. J. Oliver, Contact printed Co/insulator/Co molecular junctions, Appl. Phys. Lett, 90, 163114/
1-163114/3 (2007).
David L. Rogow, Gustavo Zapeda, Claudia H. Swanson,
Xiaojuan Fan, Charles F. Campana, Allen G. Oliver and
Scott R. J. Oliver, A Metal-Organic Framework Containing
Cationic Inorganic Layers: Pb2F2[C2H4(SO3)2], Chem. Mater,
19, 4658-4662 (2007).
Onyango M. Tedmann, Stanley K. Madan, Peter Y. Zavalij
and Scott R. J. Oliver, Crystal structure and fluorescence of a
europium(III) complex: EuCl3(2,2’-bipyridine-N,N’-dioxide)
·2CH3OH, Inorg. Chim. Acta, 360, 3408-3413 (2007).
Xiaojuan Fan, David P. Demaree, Jessica M. St. John, Akhilesh Tripathi and Scott R. J. Oliver, Double-layer porous
CALIFORNIA, SANTA CRUZ
TiO2 electrodes for solid-state dye-sensitized solar cells,
Appl. Phys. Lett, 92, 193108/1-193108/3 (2008).
Claudia H. Swanson, Harris A. Shaikh, David L. Rogow,
Allen G. Oliver, Charles F. Campana and Scott R. J. Oliver,
Antimony Oxide Hydroxide Ethanedisulfonate: a Cationic
Layered Metal Oxide for Lewis Acid Applications, J. Am.
Chem. Soc, 130, 11737-11741 (2008).
RUBIN, SETH M. (b.1976) Assistant Professor. B.A,
1998, Columbia University; Ph.D, 2003, University of
California, Berkeley. Postdoctoral Fellow, 2003-2006,
Memorial Sloan-Kettering Cancer Center. Biochemistry;
Structural Biology. Biochemistry and biophysical chemistry; molecular mechanisms of cell cycle regulation, nuclear magnetic resonance, x-ray crystallography. TEL:
(831) 459-1921 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/srubin.html
Email: srubin@ucsc.edu
No publication information submitted for this edition.
SCHLEICH, THOMAS W. (b.1938) Professor. B.S,
1960, Cornell University; Ph.D, 1966, Rockefeller University. Resident Associate, 1967, Dartmouth College;
Resident Associate, 1968; Helen Hay Whitney Foundation Fellowship, 1969, University of Oregon. Biophysics/
Biophysical Chemistry; NMR Spectroscopy. In vivo magnetic resonance spectroscopy; magnetic resonance imaging; development of NMR techniques for metabolite
spectral editing and quantitation; development of NMR
techniques for metabolite rotational diffusion in vivo.
Application of MRS and MRI to human muscle pathophysiology. TEL: (831) 459-2067 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/schleich.html
Email: schleich@chemistry.ucsc.edu
No publication information submitted for this edition.
SCOTT, WILLIAM G. (b.1963) Associate Professor.
B.S, 1985, Bates College; Ph.D, 1992, University of California, Berkeley. American Cancer Society Fellowship,
1993-1996, M. R. C. Laboratory of Molecular Biology,
Cambridge, UK. Crystallography; Structural Biology.
Structural basis of ribozyme catalysis and the origin of
life. TEL: (831) 459-5367 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/scott.html
Email: wgscott@chemistry.ucsc.edu
William G. Scott, Morphing the minimal and full-length
hammerhead ribozymes: implications for the cleavage mechanism, Biol. Chem, 388, 727-735 (2007).
William G. Scott, Ribozymes, Curr. Opin. Struct. Biol, 17,
280-286 (2007).
Tai-Sung Lee, Carlos Silva-Lopez, Monika Martick, William G. Scott and Darrin M. York, Insight into the Role of
Mg2+ in Hammerhead Ribozyme Catalysis from X-ray Crystallography and Molecular Dynamics Simulation, J. Chem.
Theory Comput, 3, 325-327 (2007).
Michael P. Robertson and William G. Scott, The structural
basis of ribozyme-catalyzed RNA assembly, Science (Washington, DC, U. S.), 315, 1549-1553 (2007).
Michael P. Robertson and William G. Scott, A general
method for phasing novel complex RNA crystal structures
without heavy-atom derivatives, Acta Crystallogr., Sect. D:
Biol. Crystallogr, D64, 738-744 (2008).
Tai-Sung Lee, Carlos Silva Lopez, George M. Giambasu,
Monika Martick, William G. Scott and Darrin M. York, Role
of Mg2+ in hammerhead ribozyme catalysis from molecular
simulation, J. Am. Chem. Soc, 130, 3053-3064 (2008).
Monika Martick, Lucas H. Horan, Harry F. Noller and
William G. Scott, A discontinuous hammerhead ribozyme
embedded in a mammalian messenger RNA, Nature (London, U. K.), 454, 899-902 (2008).
Young-In Chi, Monika Martick, Monica Lares, Rosalind
Kim, William G. Scott and Sung-Hou Kim, Capturing hammerhead ribozyme structures in action by modulating general
base catalysis, PLoS Biol, 6, 2060-2068 (2008).
William G. Scott, Hammerhead ribozyme crystal structures
and catalysis, Ribozymes RNA Catal, 48-65 (2008).
Daniel J. Koslover, Anastasia J. Callaghan, Maria J. Marcaida, Elspeth F. Garman, Monika Martick, William G. Scott
and Ben F. Luisi, The Crystal Structure of the Escherichia
coli RNase E Apoprotein and a Mechanism for RNA Degradation, Structure (Cambridge, MA, U. S.), 16, 1238-1244
(2008).
SINGARAM, BAKTHAN (b.1950) Professor. B.Sc,
1969, University of Madras, India; M.Sc, 1971, University of Madras; Ph.D, 1977, University of Madras. Postdoctoral Fellowship, 1977-1980, Purdue University;
Postdoctoral Fellowship, 1980-1982, University College,
Swansea, U. K; Associate Research Scientist, 19821989, Purdue University. Organic Chemistry. Exploratory synthetic organic chemistry; asymmetric synthesis;
development of synthetic methods and organometallic
reagents for the synthesis of optically active organic
compounds of biological and medicinal significance; utilization of modified hydrides. TEL: (831) 459-3154
FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/singaram.html
Email: singaram@chemistry.ucsc.edu
David B. Cordes, Aaron Miller, Soya Gamsey and Bakthan
Singaram, Simultaneous use of multiple fluorescent reporter
dyes for glucose sensing in aqueous solution, Anal. Bioanal.
Chem, 387, 2767-2773 (2007).
Soya Gamsey, Aaron Miller, Marilyn M. Olmstead, Christine M. Beavers, Lacie C. Hirayama, Sulolit Pradhan, Ritchie
A. Wessling and Bakthan Singaram, Boronic Acid-Based Bipyridinium Salts as Tunable Receptors for Monosaccharides
and ␣-Hydroxycarboxylates, J. Am. Chem. Soc, 129, 12781286 (2007).
Lubov Pasumansky, Christopher J. Collins, Lawrence M.
Pratt, Ngan Van Nguyen, B. Ramachandran and Bakthan
Singaram, Solvent and Temperature Effects on the Reduction
and Amination Reactions of Electrophiles by Lithium Dialkylaminoborohydrides, J. Org. Chem, 72, 971-976 (2007).
Christian T. Goralski, Dennis L. Hasha, Bakthan Singaram
and Derek Steiner, Scale-Up of the Preparation of
(1R,2R,4S)-1-Methyl-4-(1-methylethenyl)-2-(4-morpholinyl)
cyclohexanol, Org. Process Res. Dev, 11, 776-779 (2007).
Zachary Sharrett, Soya Gamsey, Jonathan Fat, Daniel Cunningham-Bryant, Ritchie A. Wessling and Bakthan Singaram, The effect of boronic acid acidity on performance of
viologen-based boronic acids in a two-component optical
glucose-sensing system, Tetrahedron Lett, 48, 5125-5129
(2007).
Scott Eagon, Jinsoo Kim, Katie Yan, Dustin Haddenham
and Bakthan Singaram, Asymmetric reductions using the chiral boronic ester TarB-H: a practical and inexpensive procedure for synthesizing chiral alcohols, Tetrahedron Lett, 48,
9025-9029 (2007).
Alexander Schiller, Boaz Vilozny, Ritchie A. Wessling
and Bakthan Singaram, Recognition of phospho sugars and
nucleotides with an array of boronic acid appended bipyridinium salts, Anal. Chim. Acta, 627, 203-211 (2008).
Lubov Pasumansky, Dustin Haddenham, Jacob W. Clary,
Gary B. Fisher, Christian T. Goralski and Bakthan Singaram,
Lithium aminoborohydrides 16. Synthesis and Reactions of
Monomeric and Dimeric Aminoboranes, J. Org. Chem, 73,
1898-1905 (2008).
Caitlin M. Binder, Darryl D. Dixon, Erik Almaraz, Marcus
A. Tius and Bakthan Singaram, A simple procedure for C-C
bond cleavage of aromatic and aliphatic epoxides with aqueous sodium periodate under ambient conditions, Tetrahedron
Lett, 49, 2764-2767 (2008).
Zachary Sharrett, Soya Gamsey, Paul Levine, Dan Cunningham-Bryant, Boaz Vilozny, Alexander Schiller, Ritchie
A. Wessling and Bakthan Singaram, Boronic acid-appended
bis-viologens as a new family of viologen quenchers for glucose sensing, Tetrahedron Lett, 49, 300-304 (2008).
Terra D. Haddad, Lacie C. Hirayama, Philip Taynton and
Bakthan Singaram, Asymmetric indium-mediated Barbiertype allylation reactions with ketones to form homoallylic alcohol products, Tetrahedron Lett, 49, 508-511 (2008).
Lacie Hirayama, Novel reactions of organoindium compounds: The synthesis of chiral alcohols, allylboron reagents
and identification of the reactive intermediates. (D)
Zachary Sharrett, Design and synthesis of substituted boronic acid containing mono-viologen and bis-viologen
quenchers: Optimization of the two-component saccharide
sensing system. (D)
SMITH, DONALD R. (b.1957) Professor. B.A, 1980,
University of California, Santa Cruz; M.A, 1985, San
Francisco State University; Ph.D, 1991, University of
California, Santa Cruz. Postdoctoral Fellow in Toxicology, 1992-1993, University of Maryland Medical School.
Neuroscience; Toxicology. Fundamental mechanisms underlying the responses and adaptations of organisms to
toxic exposures; efficacy of clinical treatments for metal
toxicity; toxicology and metabolism of metals. TEL:
(831) 459-5041 FAX: (831) 459-3524
Web: natsci.ucsc.edu/acad/etox/faculty.html
Email: smith@etox.ucsc.edu
Diane E. Stangle, Donald R. Smith, Stephane A. Beaudin,
Myla S. Strawderman, David A. Levitsky and Barbara J.
Strupp, Succimer chelation improves learning, attention, and
arousal regulation in lead-exposed rats but produces lasting
cognitive impairment in the absence of lead exposure, Environ. Health Perspect, 115, 201-209 (2007).
Myra E. Finkelstein, Keith A. Grasman, Donald A. Croll,
Bernie R. Tershy, Bradford S. Keitt, Walter M. Jarman and
Donald R. Smith, Contaminant-associated alteration of immune function in black-footed albatross (Phoebastria nigripes
), a North Pacific predator, Environ. Toxicol. Chem, 26,
1896-1903 (2007).
Daniel R. Crooks, Manik C. Ghosh, Michelle Braun-Sommargren, Tracey A. Rouault and Donald R. Smith, Manganese targets m-aconitase and activates iron regulatory protein
2 in AF5 GABAergic cells, J. Neurosci. Res, 85, 1797-1809
(2007).
Stephane A. Beaudin, Diane E. Stangle, Donald R. Smith,
David A. Levitsky and Barbara J. Strupp, Succimer chelation
normalizes reactivity to reward omission and errors in leadexposed rats, Neurotoxicol. Teratol, 29, 188-202 (2007).
Daniel R. Crooks, Nicholas Welch and Donald R. Smith,
Low-level manganese exposure alters glutamate metabolism
in GABAergic AF5 cells, NeuroToxicology, 28, 548-554
(2007).
5
Molly E. Church, Roberto Gwiazda, Donald R. Smith,
Robert W. Risebrough, Kelly Sorenson, C. Page Chamberlain, Sean Farry, William Heinrich and Bruce A. Rideout,
Response to Comment on “Ammunition is the Principal
Source of Lead Accumulated by California Condors Re-Introduced to the Wild, Environ. Sci. Technol, 42, 1809-1811
(2008).
STONE, MICHAEL D. (b.1975) Assistant Professor.
B.A, 1997, University of Pennsylvania; Ph.D, 2003, University of California, Berkeley. Postdoctoral Fellowship,
2004-2007, Harvard University. Biochemistry; Biophysics/Biophysical Chemistry. Single-molecule biophysics
and enzymology; dynamics of protein-nucleic acid interactions and mechanism of biological motors; structure,
function, and assembly of the telomerase ribonucleoprotein, Fluorescence Resonance Energy Transfer (FRET),
optical/magnetic trapping, sub-diffraction optical imaging of telomeres and the nucleus. TEL: (831) 459-2845
FAX: (831) 459-2935
Web: chemistry.ucsc.edu/faculty/Stone.html
Email: mstone@chemistry.ucsc.edu
J. Gore, Z. Bryant, M. D. Stone, M. Nollmann, N. R. Cozzarelli and C. Bustamante, Mechanochemical analysis of
DNA gyrase using rotor bead tracking, Nature, 439, 100-104
(2006).
Marcelo Noellmann, Michael D. Stone, Zev Bryant, Jeff
Gore, Nancy J. Crisona, Seok-Cheol Hong, Sylvain Mitelheiser, Anthony Maxwell, Carlos Bustamante and Nicholas
R. Cozzarelli, Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque, Nat. Struct. Mol.
Biol, 14, 264-271 (2007).
Michael D. Stone, Mariana Mihalusova, Catherine M.
O’Connor, Ramadevi Prathapam, Kathleen Collins and
Xiaowei Zhuang, Stepwise protein-mediated RNA folding
directs assembly of telomerase ribonucleoprotein, Nature
(London, U. K.), 446, 458-461 (2007).
SWITKES, EUGENE (b.1943) Professor. A.B, 1965,
Oberlin College; M.A, 1970, Harvard University; Ph.D,
1970, Harvard University. NSF Postdoctoral Fellowship,
1970-1971, Cambridge University. Physical Chemistry;
Theoretical Chemistry. Electronic structure of molecules;
mechanism of visual accommodation; visual information
processing; color vision; diabetes; evoked potentials.
TEL: (831) 459-2000 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/switkes.html
Email: switkes@chemistry.ucsc.edu
switkes@ucsc.edu
E. Switkes, Contrast salience across three-dimensional
chromoluminance space, Vision Research, 48, 1812-1819
(2008).
WIPKE, W. TODD (b.1940) Professor. B.S, 1962,
University of Missouri, Columbia; Ph.D, 1965, University of California, Berkeley. Postdoctoral Fellowship,
1967-1969, Harvard University; Assistant Professor,
1969-1975, Princeton University; Associate Professor,
1975-1981, University of California, Santa Cruz; Alexander von Humboldt Fellowship, 1987-1988, Technical
University, Munich. Bioinformatics; Computational
Chemistry. Computer-assisted design of combinatorial
chemistry; computer design of drugs; molecular engineering; supramolecular chemistry; computer-assisted instruction. TEL: (831) 459-2397 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/wipke.html
Email: wipke@chemistry.ucsc.edu
No publication information submitted for this edition.
ZHANG, JIN Z. (b.1962) Professor. B.S, 1983, Fudan
University, Shanghai, China; Ph.D, 1989, University of
Washington, Seattle. Postdoctoral Fellow, 1989-1992,
University of California, Berkeley. Materials Chemistry;
Physical Chemistry. Design, synthesis, characterization
and applications of semiconductor, metal and metal oxide nanomaterials; femtosecond laser spectroscopy and
ultrafast dynamics at liquid-solid interfaces; sensing and
detection of cancer biomarkers; surface-enhanced Raman
scattering (SERS); charge and energy transfer on surface
and at interfaces; solar energy conversion and hydrogen
generation. TEL: (831) 459-3776 FAX: (831) 459-2935
Web: www.chemistry.ucsc.edu/faculty/zhang.html
Email: zhang@chemistry.ucsc.edu
Yi Zhang, C. Shi, C. Gu, L. Seballos and J. Z. Zhang, Liquid core photonic crystal fiber sensor based on surface enhanced raman scattering, Appl. Phys. Lett, 90, 193504193506 (2007).
Yi Zhang, Chao Shi, Claire Gu, Leo Seballos and Jin Z.
Zhang, Liquid core photonic crystal fiber sensor based on
surface enhanced Raman scattering, Appl. Phys. Lett, 90,
193504/1-193504/3 (2007).
Philip Measor, Leo Seballos, Dongliang Yin, Jin Z. Zhang,
Evan J. Lunt, Aaron R. Hawkins and Holger Schmidt, Onchip surface-enhanced Raman scattering detection using integrated liquid-core waveguides, Appl. Phys. Lett, 90, 211107/
1-211107/3 (2007).
6
CALIFORNIA, SANTA CRUZ
S. M. Dybiec, A. Chornokur, S. Ostapenko, A. Wolcott, D.
Ortiz, J. Z. Zhang, A. Zajac, C. Phelan and T. Sellers, Photoluminescence spectroscopy of bio-conjugated CdSe/ZnS
quantum dots, Appl. Phys. Lett, 90, 263112 (2007).
Nadejda Rozanova, Jin Z. Zhang and Diane E. Heck, Catalytic therapy of cancer with porphyrins and ascorbate, Cancer Lett. (Amsterdam, Neth.), 252, 216-224 (2007).
Leo Seballos, Nicole Richards, Daniel J. Stevens, Mira Patel, Laura Kapitzky, Scott Lokey, Glenn Millhauser and Jin
Z. Zhang, Competitive binding effects on surface-enhanced
Raman scattering of peptide molecules, Chem. Phys. Lett,
447, 335-339 (2007).
Nadejda Rozanova (Torshina), Jin Z. Zhang and Diane E.
Heck, Catalytic therapy of cancer with ascorbate and extracts
of medicinal herbs, Evidence-based Complementary and Alternative Medicine, 4, 1-10 (2007).
Adam M. Schwartzberg, Tammy Y. Olson, Chad E. Talley
and Jin Z. Zhang, Gold nanotubes synthesized via magnetic
alignment of cobalt nanoparticles as templates, J. Phys.
Chem. C, 111, 16080-16082 (2007).
A. M. Schwartzberg, C. D. Grant, Tony van Buuren and J.
Z. Zhang, Reduction of HAuCl4 by Na2S revisited: The case
for Au nanoparticle aggregates and against Au2S/Au core/
shell particles, J. Phys. Chem. C, 111, 8892-8901 (2007).
Fanxin Wu, Jung Ho Yu, Jin Joo, Taeghwan Hyeon and Jin
Z. Zhang, Ultrafast electronic dynamics of monodisperse PbS
and CdS nanoparticles/nanorods: Effects of size on nonlinear
relaxation, Opt. Mater, 29, 858-866 (2007).
Fanxin Wu, Jung Ho Yu, Jin Joo, Taeghwan Hyeon and Jin
Z. Zhang, Ultrafast electronic dynamics of monodisperse PbS
and CdS nanoparticles/nanorods: effects of size on nonlinear
relaxation, Opt. Mater. (Amsterdam, Neth.), 29, 858-866
(2007).
Zilu Wu, Anindya Ghosh-Roy, Mehmet Fatih Yanik, Jin Z.
Zhang, Yishi Jin and Andrew D. Chisholm, Caenorhabditis
elegans neuronal regeneration is influenced by life stage,
ephrin signaling, and synaptic branching, Proc. Natl. Acad.
Sci. U. S. A, 104, 15132-15137 (2007).
Leo Seballos, Rebecca Newhouse, Jin Z. Zhang, Eric
Majzoub and Ewa Roennebro, Temperature-dependent Raman scattering study of LiAlH4 and Li3AlH6, Proc. SPIE-Int.
Soc. Opt. Eng, 6650, 66500N/1-66500N/6 (2007).
Rebecca Newhouse, Leo Seballos, J. Z. Zhang, Eric
Majzoub and Ewa Ronnebro, Temperature dependent Raman
scattering study of LiAlH4 and Li3AlH6, SPIE Proc, 6650,
0N1-0N6 (2007).
Y. Zhang, C. Shi, C. Gu, B. Chen, L. Seballos, A. M.
Schwartzberg and J. Z. Zhang, Molecular probes based on
microstructured fibers and surface enhanced raman scattering, SPIE Proc, 6698, 0U1-0U11 (2007).
Kenneth L. Knappenberger, Jr., Daryl B. Wong, Wei Xu,
Adam M. Schwartzberg, Abraham Wolcott, Jin Z. Zhang and
Stephen R. Leone, Excitation-Wavelength Dependence of
Fluorescence Intermittency in CdSe Nanorods, ACS Nano, 2,
2143-2153 (2008).
J. Z. Zhang and C. D. Grant, Optical and dynamic properties of semiconductor nanomaterials, Ann. Rev. of Nano Research, 2, 1 (2008).
Chao Shi, He Yan, Claire Gu, Debraj Ghosh, Leo Seballos,
Shaowei Chen, Jin Z. Zhang and Bin Chen, A double substrate “sandwich” structure for fiber surface enhanced Raman
scattering detection, Appl. Phys. Lett, 92, 103107/1-103107/3
(2008).
Chao Shi, Chao Lu, Claire Gu, Lei Tian, Rebecca Newhouse, Shaowei Chen and Jin Z. Zhang, Inner wall coated
hollow core waveguide sensor based on double substrate surface enhanced raman scattering, Appl. Phys. Lett, 93, 153101
(2008).
Nadejda Rozanova and Jin Z. Zhang, Metal and magnetic
nanostructures for cancer detection, imaging and therapy, J.
Biomed. Nanotechnol, 4, 377-399 (2008).
Tammy Y. Olson and Jin Z. Zhang, Structural and optical
properties and emerging applications of metal nanomaterials,
J. Mater. Sci. Technol, 24, 443-446 (2008).
C. Shi, Y. Zhang, C. Gu, B. Chen, L. Seballos, T. Olson
and J. Z. Zhang, Molecular fiber sensors based on surface enhanced raman scattering (SERS), J. Nanosci. Nanotech, 9,
2234-2246 (2008).
F. Wu, J. Zaug, C. E. Young and J. Z. Zhang, Pressure-induced phase transition in Thiol-capped CdTe Nanoparticles,
J. Nanosci. Nanotech, 8, 6528-6532 (2008).
A. Escobedo Morales, R. Aceves, U. Pal and J. Z. Zhang,
Low temperature photoluminescence characteristics of chemically synthesized indium doped zinc oxide nanostructures, J.
Nanosci. Nanotech, 8, 6538-6544 (2008).
Adam M. Schwartzberg and Jin Z. Zhang, Novel Optical
Properties and Emerging Applications of Metal Nanostructures, J. Phys. Chem. C, 112, 10323-10337 (2008).
Tzarara Lopez-Luke, Abraham Wolcott, Li-ping Xu,
Shaowei Chen, Zhenhai Wen, Jinghong Li, Elder De La Rosa
and Jin Z. Zhang, Nitrogen-Doped and CdSe Quantum-DotSensitized Nanocrystalline TiO2 Films for Solar Energy Conversion Applications, J. Phys. Chem. C, 112, 1282-1292
(2008).
T. Lopez-Luke, A. Wolcott, Liping Xu, Shaowei Chen,
Zhenhai Wen, Jinghong Li, Elder de La Rosa-Cruz and J. Z.
Zhang, Nitrogen doped and CdSe quantum dot sensitized nanocrystalline TiO2 films for solar energy conversion applications, J. Phys. Chem. C, 112, 1282-1292 (2008).
Tammy Y. Olson, Adam M. Schwartzberg, Christine A.
Orme, Chad E. Talley, Breanna O’Connell and Jin Z. Zhang,
Hollow Gold-Silver Double-Shell Nanospheres: Structure,
Optical Absorption, and Surface-Enhanced Raman Scattering, J. Phys. Chem. C, 112, 6319-6329 (2008).
Geng Wang, Da Chen, Hao Zhang, Jin Z. Zhang and Jinghong Li, Tunable Photocurrent Spectrum in Well-Oriented
Zinc Oxide Nanorod Arrays with Enhanced Photocatalytic
Activity, J. Phys. Chem. C, 112, 8850-8855 (2008).
Marites P. Melancon, Wei Lu, Zhi Yang, Rui Zhang, Zhi
Cheng, Andrew M. Elliot, Jason Stafford, Tammy Olson, Jin
Z. Zhang and Chun Li, In vitro and in vivo targeting of hollow gold nanoshells directed at epidermal growth factor receptor for photothermal ablation therapy, Mol. Cancer Ther,
7, 1730-1739 (2008).
Chao Shi, Yi Zhang, Claire Gu, Leo Seballos and Jin Z.
Zhang, Manipulation and light-induced agglomeration of carbon nanotubes through optical trapping of attached silver nanoparticles, Nanotechnology, 19, 215304/1-215304/6 (2008).
J. Z. Zhang and C. Noguez, Plasmonic optical properties
and applications of metal nanomaterials, Plasmonics, 3, 127150 (2008).
Chao Shi, Yi Zhang, Claire Gu, Leo Seballos and Jin Z.
Zhang, Low concentration biomolecular detection using liquid core photonic crystal fiber (LCPCF) SERS sensor, Proc.
SPIE, 6852, 685204/1-685204/8 (2008).
A. Wolcott, W. A. Smith, T. R. Kuykendallc, Y. P. Zhao
and J. Z. Zhang, Photoelectrochemical generation of hydrogen from water splitting based on dense and aligned TiO2
nanorod arrays, Small, 5, 104-111 (2008).
Leo B. Seballos, Raman and surface enhanced raman scattering of biomolecules and materials for hydrogen storage
and delivery. (D)