Preparations for Genetically Modified Anopheles gambiae s.s. Mosquitoes for Malaria Control in Uganda. Birungi K1, Kayondo J1., Masembe C2., Mukwaya L.G1., and Birungi J1. 1Uganda Virus Research Institute (UVRI), Division of Entomology, P.O. Box 49 Entebbe University Kampala, College of Biological Sciences, P.O. Box 7062 Kampala 2Makerere Contact person: Birungi Krystal Email: KBirungi@uvri.go.ug, Phone: 0792 504 071 BACKGROUND: Malaria is a vector borne disease that still remains of public health concern worldwide. Despite control initiatives including insecticide residual spraying, use of insecticide treated nets, intermittent preventive therapy in pregnancy and artemisinin-based combination therapy in Uganda, the malaria burden still remains. The development of genetically modified mosquitoes (GMMs) is another attempt for malaria control. A GMM has been developed for the Anopheles gambiae s.s. mosquito, an important vector of malaria worldwide and a predominant vector in Uganda. In order to evaluate GMM effectiveness in Uganda, well characterized confined potential field sites need to be identified. This paper discusses essential preparations for release of GMMs to be undertaken, which include; (i) Observe An. gambiae s.s distribution patterns, (ii) Determine Anopheline species diversity and abundance and how the species composition varies seasonally (iii) determine genetic gene flow rates between selected island populations. This will identify suitable field sites for confined release of genetically modified An gambiae s.s. METHODS:The study will be carried out on four selected islands; Nsadzi, Buvu, Jana and Serinya islands. Anopheline mosquitoes will be sampled. Adult mosquitoes will be collected both indoors and outdoors from randomly selected houses for a period of two years. Larvae and pupae will also be collected from breeding habitats and sent to the insectary for rearing. Adults will be identified using morphological and molecular characteristics. The species number and abundance per sampling will be documented. Daily records of climatic conditions will be obtained from the Meteorological department. Variations in abundance due to environmental conditions and the association between An gambiae s.s and other Anopheline species will be computed. Confirmed An gambiae s.s from the different islands will be genotyped to determine extent of gene flow between the islands. CONCLUSION: This study will contribute to another step in the direction of malaria control.