Intro to Genetics What genetic traits do you have? Widow’s peak vs. straight hairline Attached earlobes vs. free Gapped vs. ungapped front teeth Do any of these traits run in your family? Where do these traits come from? Who do we inherit them from? Can you think of any other traits we could inherit? Genes are passed from one generation to the next, but they are not all expressed in every generation. i.e. Eye color I. The Work of Gregor Mendel A. What is an inheritance? 1. To most people, it is money or property left to them by a relative who has passed away. That is an important type of inheritance but the inheritance we care about is your genes. 2. Every living thing – plant or animal, microbe or human – has a set of characteristics inherited from its parent or parents. 3. As a result of people wanting to know how and why they became the person they did, genetics has been accepted as the exciting scientific study of heredity. B. Gregor Mendel’s Peas 1. Gregor Mendel Austrian monk who was very important in understanding biological inheritance. a) b) He was born in 1822. After becoming a priest, Mendel spent several years studying science and mathematics at the University of Vienna. c) He then spent 14 years working in the monastery and teaching and gardening. d) He began to study what we know as genetics with ordinary peas. e) He first began to understand fertilization within pea plants. During sexual reproduction, male and female reproductive cells join which is known as fertilization. f) Fertilization produced a new cell, which develops into a tiny embryo. (1) Pea flowers are normally self-pollinating, which means that sperm cells in pollen fertilize the egg cells in the same flower. The seeds that are produced by self-pollination inherit all of their characteristics from the single plant. (2) When Mendel first started he had several stocks of pea plants. These peas were true-breeding, meaning that if they were allowed to self-pollinate, they would produce offspring identical to themselves. (3) Mendel forced the plants to cross-pollinate, which allowed seeds to have two different plants as parents. This made it possible for Mendel to cross-breed plants with different characteristics, and then to study the results (4) C. Genes and Dominance 1. Mendel studied seven different pea plant traits. 2. A trait is a specific characteristic, such as seed color or plant height, that varies from one individual to another. 3. We call each original pair of plants the P (parental) generation. The offspring are called the F1 generation. 4. The offspring of crosses between parents with different traits are called hybrids. 5. Did the characters of the parent plants blend in the offspring? Not at all. To his surprise all the offspring has the character of only one of the parents. 6. From this set of experiments, Mendel drew two conclusions. 1st - Biological inheritance is determined by factors that are passed from one generation to the next, which we now call genes. a) 2nd – Principle of Dominance, which states that some alleles are dominant and others are recessive. b) (1) The different forms of a gene are called alleles An organism with a dominant allele for a particular form of the trait will always exhibit that form of the trait. (2) An organism with a recessive allele for a particular form of a trait will exhibit that form only when the dominant allele for the trait is not present. (3) D. Segregation 1. Had the recessive allele disappeared, or were they still present in the F1 plants? To answer this question Mendel allowed all seven kinds of F1 hybrid plants an F1 generation by self-pollination. 2. The F1 Cross When Mendel compared the F2 plants, he discovered that the traits controlled by the recessive alleles had reappeared! a) Roughly ¼ of the F2 plants showed the trait controlled by the recessive allele. b) 3. Explaining the F1 Cross a) Segregation – separation of alleles during gamete formation b) Gametes – specialized cell involved in sexual reproduction When each F1 plant flowers and produces gametes, the two alleles segregate from each other so that each gamete carries only a single copy of each gene. Therefore, each F1 plant produces two types of gametes – those with the allele for tallness and those with the allele for shortness. c) II. Probability and Punnett Squares A. Whenever Mendel preformed a cross with pea plants, he carefully categorized and counted the many offspring. Every time Mendel repeated a particular cross, he obtained similar results. B. Mendel realized that the principles of probability could be used to explain the results of genetic crosses. C. Genetics and Probability 1. The likelihood that a particular event will occur is called probability. 2. Consider an ordinary event like flipping a coin. There are two possible outcomes: a) Heads up b) Tails up 3. The chances, or probabilities, of either outcome are equal. Therefore, the probability that a single coin flip will come up heads is 1 chance in 2, this is 1/2, or 50%. 4. If you flip a coin 5 times in a row, what is the probability that it will land heads up every time? 5. Because each coin flip is an independent event, the probability of each coin’s landing heads up is ½. Therefore, the probability of flipping 5 heads in a row is: a) ½ x ½ x ½ x ½ x ½ = 1/32 6. The principles of probability can be used to predict the outcomes of genetic crosses. III. Exploring Mendelian Genetics A. Does one pair or alleles affect the segregation of another pair of alleles? B. For example, does the gene that determines weather a seed is round or wrinkled have anything to do with the gene for seed color? C. Independent Assortment 1. The Two-Factor Cross: F1 Mendel crossed true-breeding plants that produced only round yellow peas (genotype RRYY) with plants that produced wrinkled green peas (genotype rryy). All of the offspring produced round yellow peas. a) b) A Punntt square for this cross is shown in Fig. 11-9 p 270. This cross does not indicate whether genes assort, or segregate, independently. But it produces the hybrid plants he needed for the next generation. c) 2. The Two-Factor Cross: F2 Mendel knew that the F1 plants had genotypes of RrYy – all heterozygous for both the seed shape and seed color. a) When crossing the F2 generation would the two dominate alleles always stay together? Or would they “segregate independently” so that any combinations of alleles was possible? b) c) In Mendel’s experiment, the F2 plants produced 556 seeds. Mendel compared the variation in the seeds. He observed that 315 seeds were round and yellow and another 32 were wrinkled and green, the two parental phenotypes. However 209 of the seeds had combinations of phenotypes not found in either parent. d) This clearly meant that the alleles for seed shape segregated independently of those for seed color – a principle known as independent assortment. e) Mendel’s experimental results were very close to the 9:3:3:1 ratio that the Punnett square predicted. f) The principle of independent assortment states that genes for different traits can segregate independently during the formation of gametes. Independent assortment help account for the many genetic variations observed in plants, animals, and other organisms. g) D. A Summary of Mendel’s Principles 1. Mendel’s principles from the basis of the modern science of genetics. These principles can be summarized as follows: The inheritance of biological characteristics is determined by individual units known as genes. Genes are passed from parents to their offspring. a) In cases in which two or more forms (alleles) of the gene for a single trait exist, some forms of the gene may be dominant and other may be recessive. b) In most sexually reproducing organism, each adult has two copies of each gene—one from each parent. These genes are segregated from each other when gametes are formed. c) The alleles for different genes usually segregate independently of one another. d) E. Beyond Dominant and Recessive Alleles 1. Not all genes show simple patterns of dominant and recessive alleles. In most organisms, genetics is more complicated, because the majority of genes have more then two alleles. 2. Some alleles are neither dominant nor recessive, and many traits are controlled by multiple alleles or multiple genes. 3. Incomplete Dominance A cross between two four o’clock plants shows one of these complications. The F1 generation produced by a cross between red-flowered (RR) and white-flowered (WW) plants consists of pink-colored flowers (RW). a) b) Which allele is dominant in this case? Neither one. This is a case of incomplete dominance. Incomplete dominance is a case in which one allele is not completely dominant over another. c) 4. Codominance A similar situation is codominance, in which both alleles contribute to the phenotype. a) For example, in certain varieties of chicken, the allele for black feathers is codominant with the allele for white feathers. Heterozygous chickens have speckled black and white feathers. b) Many human genes show codominance, also, including one for a protein that controls cholesterol levels in the blood. People with the heterozygose form of the gene produce two different forms of the protein, each with a different effect on cholesterol levels. c) 5. Multiple Alleles Many genes have more than two alleles and are therefore said to have multiple alleles. a) This means that more than two possible alleles exist in a population. b) Rabbit coat color is the best example. A rabbit’s coat color is determined by a single gene that have a least four different alleles, each one producing a different coat color possibility. c) F. Applying Mendel’s Principles 1. American geneticist Thomas Hunt Morgan in the 1900s decided to work on a tiny insect that kept showing up, uninvited, in his laboratory, known as a common fruit fly, Drosophila melanogaster 2. Drosophila was an ideal organism for genetics because it could produce plenty of offspring quickly. A single pair of flies could produce as many as 100 offspring. 3. Mendel’s principles applied to Drosophila and also humans. G. Genetics and the Environment 1. The characteristics of any organism, whether bacterium, fruit fly, or humans, are not determined solely by the genes it inherits. Rather, characteristics are determined by interaction between genes and the environment. IV. Meiosis A. Genes are located on chromosomes in the cell nucleus. B. Mendel’s principles of genetics 1. Organisms must inherit a single copy of every gene from each of it’s “parents.” 2. When an organism produces its own gametes, those 2 sets of genes must be separated from each other so that each gamete contains just one set of genes. C. Chromosome Numbers 1. Fruit fly, Drosophila has 8 chromosomes. Four from the male parent, 4 from female parent. 2. These 2 sets of chromosomes are homologous, meaning that each of the 4 chromosomes that came from the male parent have a corresponding chromosome that came from the female parent. 3. A cell that contains both sets of homologous chromosomes is said to be diploid, which means “two sets.” This is represented by the symbol 2N. Thus for Drosophila the diploid number is 8 which can be written 2N=8. a) 4. Gametes of sexually reproducing organisms contain only a single set of chromosomes, and therefore only a single set of genes which are called haploid, meaning “one set.” D. Phases of Meiosis 1. How are haploid (N) gamete cells produced from diploid (2N) cells? 2. Meiosis is a process of reduction division in which the number of chromosomes per cell is cut in half through the separation of homologous chromosomes in a diploid cell. 3. Meiosis usually involves two distinct divisions, called meiosis I and meiosis II. By the end of meiosis II, the diploid cell that entered meiosis has become 4 haploid cells a) 4. Meiosis I Prior to meiosis I, each chromosome is replicated. The cells then begin to divide in a way that looks similar to mitosis. a) In mitosis, the 4 chromosomes line up individually in the center of the cell. The 2 chromatids that make up each chromosome then separate from each other. b) In prophase of meiosis I each chromosomes pairs with its corresponding homologous chromosome to form a structure called a tetrad. There are 4 chromatids in a tetrad. c) As homologous chromosomes pair up and form tetrads in meiosis I, they exchange portions of their chromatids in a process called crossing-over. d) Crossing-over results in the exchange of alleles between homologous chromosomes and produced new combinations of alleles. (1) Then the homologous chromosomes separate, and two new cells are formed. e) Because each pair of homologous chromosomes was separated, neither of the daughter cells has the two complete sets of chromosomes that it would have in a diploid cell. f) The two cells produced by meiosis I have sets of chromosomes and alleles that are different from each other and from the diploid cell that entered meiosis I. g) 5. Meiosis II The two cells produced by meiosis I now enter a second meiotic division. Unlike the first division, neither cell goes through a round of chromosome replication before entering meiosis II. a) b) Each of the cell’s chromosomes has 2 chromatids. During metaphase II of meiosis, chromosomes line up in the center of the cell. c) d) Anaphase II the paired chromatids separate. Those four daughter cells now contain the haploid number (N) – just 2 chromosomes each. e) E. Gamete Formation 1. In males, meiosis results in four equal-sized gametes, called sperm. 2. In females, only one large egg cell results from meiosis. The other three cells, called polar bodies, usually are not involved in reproduction. F. Comparing Mitosis and Meiosis 1. Mitosis results in the production of two genetically identical diploid cells, whereas meiosis produces four genetically different haploid cells. V. Linkage and Gene Maps A. Gene Linkage 1. After identifying more than 50 Drosophila genes, Morgan discovered that many of them appeared to be “linked” together in ways that, at first glance, seemed to violate the principle of independent assortment. 2. For example, a fly with reddish-orange eyes and miniature wings was used in a series of crosses. The results showed that the genes for those traits were almost always inherited together and only rarely became separated from each other. 3. It was discovered that the linkage groups sort independently, but all of the genes in one group were inherited together. 4. It is the chromosomes, however, that sort independently, not individual genes. B. Gene Maps 1. If two genes are found on the same chromosome, it does not mean that they are linked together forever. 2. Crossing-over during meiosis sometimes separates genes that had been on the same chromosome onto homologous chromosomes. 3. The rate at which linked genes were separated and recombined can be used to produce a “map” of distances between genes.