BIO 132 – PRINCIPLES OF BIOLOGY II COURSE OUTLINE Spring 2015 ( Dates subject to change) DATE: Jan 20 (required attendance) LECTURE TOPICS: Course Introduction Introduction to Charles Darwin’s On the Origin of Species Introduction to today’s influential journals: Nature, Science, and the New England Journal of Medicine Introduction to evolutionary tree homework Distribute potential exam questions for Exam I: Grandma Johnson DQCs Rainforest question #6 DQCs Energy Pyramid DQCs Update email address in BlackBoard and on “MyCecil” DATE: Jan 23 LECTURE TOPICS: 1. Molecular ecology: Carbon, Water, Oxygen, and Nitrogen cycling Work in groups to answer the questions in study guides: Grandma Johnson Rainforest question #6 2. Energy flow in ecosystems Work in groups to answer the questions in the study guide: Energy Pyramid DQCs Review concepts learned in BIO 131. Refer to the following lecture notes and study guides located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction DATE: Jan 27 LECTURE TOPICS: Review of (1) Molecular ecology: Carbon, Water, Oxygen, and Nitrogen cycling; and (2) Energy flow in ecosystems. Ask questions pertaining to study guides: Grandma Johnson Rainforest question #6 Energy Pyramid DQCs 1 Prior preparation: Answer questions in the study guides: Grandma Johnson Rainforest question #6 Energy Pyramid DQCs Review concepts learned in BIO 131. Refer to the following lecture notes and study guides located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction (Jan. 30) (last day to drop for full refund) DATE: Jan 30 (required attendance) EXAM I: Matter cycling and energy flow in ecosystems Distribute potential exam questions for Exam II. Distribute workbooks for Ecology Presentation Project. Prior preparation: Potential exam questions for Exam I: Grandma Johnson DQCs Rainforest question #6 DQCs Energy Pyramid DQCs Organize your notes and bring them to class along with your textbook. You may request 5 minutes of open book/notes. DATES: Feb 3, 6 and 10 (required attendance) LECTURE TOPIC: Computer Simulation Project on population ecology, community ecology, or biomes (ecosystem ecology) Read at least 3 workbook introductions and become familiar with the rest of the workbook content. Choose the topic of greatest interest. Prepare to describe your choice and its merits as a project topic. Choose a team and begin working on your project. As a team, complete your computer simulation and presentation. Some work on the project may need to be completed outside of class. 2 DATES: Feb 13 and 17 (required attendance) LECTURE TOPIC: Computer Simulation Project Presentations on population ecology, community ecology, or biomes (ecosystem ecology) Critique presentations by classmates. (2 Participation grades) DATE: Feb 20 and 24 (required attendance) LECTURE TOPICS: Ecosystems & Environmental Concerns: “An Inconvenient Truth” DVD. A substitute assignment will be offered to those familiar with the DVD. (Participation grade) Prior preparation and key terms to study: Read your text material related to climate change. Study the environmental science term “Tragedy of the Commons.” DATE: Feb 27 (required attendance) LECTURE TOPICS: Charles Darwin and the Evolutionary Tree of Life View the BBC “Life on Earth” narrated by David Attenborough, DVD chapter 1 - 3 and complete the study guide Life on Earth Discuss 1st chapter of On the Origin of Species, “Variation under Domestication” (Homework grade and Participation grade) Prior preparation: Homework Due: Locate and bring to class a copy of Charles Darwin’s On the Origin of Species. You may either bring a hard copy or an electronic copy saved to your laptop, tablet, electronic reader, or other electronic device that allows you to access the book while in class (wireless Internet will be available). (Homework grade) Read the 1st chapter of On the Origin of Species Highlight important passages and/or take notes. Be prepared to discuss the book chapter. (Participation grade) Questions to consider: Was the content what I expected to read in Darwin’s On the Origin of Species? How relevant is the content to today’s readers? Does modern scientific knowledge of evolution support his statements? How well does he present his arguments? Are there particular passages that caught your attention? Why? Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Mendelian Inheritance Evolution Write working definitions for the following terms: Evolution 3 Character (a.k.a. trait, factor, or phenotype) Derived similarity Ancestral (a.k.a. primitive) trait Mutations Alleles DATE: MARCH 3 and 6 (required attendance) LECTURE TOPICS: Microevolution: Population Genetics 1. Lecture on Microevolution: Population Genetics 2. View the BBC “Challenges of Life” narrated by David Attenborough, DVD chapters 2-3 and complete the study guide. Discuss your answers (Participation grade). Prior preparation and key terms to study: Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Mendelian Inheritance Evolution Review your working definitions for the following terms: Evolution Character (a.k.a. trait, factor, or phenotype) Derived similarity Ancestral (a.k.a. primitive) trait Mutations Alleles DATE: March 10 and 13 (required attendance) LECTURE TOPICS: Evolutionary Trees: Illustrations of Biological Unity and Diversity. 1. Discussion of 2nd chapter of On the Origin of Species, “Variation under Nature” (Participation grade) Prior preparation and key terms to study: Read the 2nd chapter of On the Origin of Species, “Variation under Nature.” Highlight important passages and/or take notes. Be prepared to discuss the book chapter. Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Mendelian Inheritance Evolution Review your working definitions for the following terms: Evolution Character (a.k.a. trait, factor, or phenotype) Derived similarity 4 Ancestral (a.k.a. primitive) trait Mutations Alleles 2. Evolutionary Trees: Introduction to evolution, phylogeny and modern systematics. Prior preparation and key terms to study: Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Cell Reproduction Mendelian Inheritance Take textbook notes on the following terms: Evolution Phylogeny Systematics Most Recent Common Ancestor Character (a.k.a. trait, factor, or phenotype) Derived similarity Convergent evolution Ancestral (a.k.a. primitive) trait Monophyletic Polyphyletic Paraphyletic Clades Nodes Parsimony Mitochondrial DNA Nuclear DNA Mutations Alleles DATE: March 16 - 21 VACATION Good time to study for next exam. DATE: March 24 and 27 (required attendance) LECTURE TOPICS: Evolutionary Trees: Illustrations of Biological Unity and Diversity Analyses of sample trees from scientific articles (Participation grade and Homework grade) Prior preparation and key terms to study: Homework Due: Bring to class at least one news article based on peer-reviewed science that makes use of an evolutionary tree to illustrate a concept. The tree will need to be viewed by classmates and the professor, so save a copy to a flash-drive to be opened on 5 the classroom computer or make 4 paper copies prior to the start of class. Be prepared to discuss the article and its scientific merit. Be prepared to use appropriate terminology (listed below) to describe the tree(s) in the article. Review your working definitions of the following terms: Evolution Phylogeny Systematics Most Recent Common Ancestor Character (a.k.a. trait, factor, or phenotype) Derived similarity Convergent evolution Ancestral (a.k.a. primitive) trait Monophyletic Polyphyletic Paraphyletic Clades Nodes Parsimony Mitochondrial DNA Nuclear DNA Mutations Alleles DATE: Mar 31 (required attendance) LECTURE TOPICS: Exam II Prior preparation: Be prepared to answer all potential exam questions for Exam II. Review Darwin’s 1st and 2nd chapter of On the Origin of Species (Bring your copy to the exam. You may refer to it during the exam.) Organize your notes and bring them, along with your textbook, to class. You may request 10 minutes of open book/notes. Darwin may stay open during the entire exam. DATE: April 3 LECTURE TOPICS: Macroevolution: Ecological evolution Prior preparation and key terms to study: Review information in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction 6 Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : ORIGIN OF LIFE Kingdoms Archaebacteria, Eubacteria and Protista Evolutionary Tree (Apr 6) (Last day to withdraw without grade penalty) DATE: April 7 (required attendance) LECTURE TOPICS: Viruses and Immunization (Participation grade and Homework grade) Prior preparation and key terms to study: Review information in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Viruses and Immunization Homework Due: Bring to class at least one example of a virus in the news. The news article must be based on peer-reviewed science. News articles must be dated within the past two years. Scientifically peer-reviewed Internet sources are acceptable. Journalists publishing in reputable daily, weekly, or monthly newspapers or magazines that cite scientifically peer-reviewed sources are acceptable articles for class discussion. Examples of such sources include the journals Science, Nature, and the New England Journal of Medicine. Come prepared to discuss the content of your article. If printing your article, highlight the term “virus” or “viral,” the name (common or scientific) of the virus, the host it parasitizes, and at least one important or interesting characteristic of the virus. Be prepared to discuss the position of your virus strain in evolution and/or the ecosystem. Read the entire article, but print only the page(s) with this essential information. If bringing an electronic copy, discussing your article during class will earn credit for you. DATE: April 10 (required attendance) LECTURE TOPICS: Domain/Kingdom Archae, Domain/Kingdom Eubacteria and Domain Eukarya, Kingdom Protista (Participation grades and Homework grades) Review information in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life 7 Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : ORIGIN OF LIFE Kingdoms Archaebacteria, Eubacteria and Protista Evolutionary Tree Homework Due: After reading the lecture notes and related text material, bring to lecture three items, one item representing EACH of the three Kingdoms: Archaebacteria, Eubacteria, and Protista. Collect one organism OR bring a news article describing an "organism in the news" from EACH of the three Kingdoms: Archae, Eubacteria, and Protista for a total of THREE ITEMS. If bringing news articles, they must be dated within the past two years. Scientifically peer-reviewed Internet sources are acceptable. Journalists publishing in reputable daily, weekly, or monthly newspapers or magazines that cite scientifically peer-reviewed sources are acceptable articles for class discussion. Examples of such sources include the journals Science, Nature, and the New England Journal of Medicine. Come prepared to discuss the content of your article. In your article, highlight the name of the Kingdom in which the organism is classified, the name (common or scientific) of the organism, and at least one important or interesting characteristic of the organism. Be prepared to discuss the position of your organisms in evolution and/or the ecosystem (participation and homework grades). If bringing a microscopic organism, you may bring a sample of a habitat specific to a species and you must describe the species living in the habitat. You may also bring an Internet photo of the species to accompany the habitat sample. COLLECTING RULES: 1. Organism contained, but observable 2. Alive or freshly collected 3. Small quantities of each species 4. No endangered or threatened species (> 10 at site; familiar in other locations) 5. No violations of local, state, federal or international laws If bringing a microscopic organism, you may bring a sample of a habitat specific to a species and you must describe the species living in the habitat. You may also bring an Internet photo of the species to accompany the habitat sample. DATE: April 14 (required attendance) LECTURE TOPIC: Fungi Kingdom Fungi (participation grade and homework grade) 8 Fungi Homework Due: Bring at least one example from the Kingdom Fungi within the Domain of Eukaryotes (homework grade). The example may be a live specimen or a news article based on peer-reviewed science. News articles must be dated within the past two years. Scientifically peer-reviewed Internet sources are acceptable. Journalists publishing in reputable daily, weekly, or monthly newspapers or magazines that cite scientifically peer-reviewed sources are acceptable articles for class discussion. Come prepared to discuss the content of your article. In your article, highlight the name of the Kingdom, the name (common or scientific) of the species, and at least one important or interesting characteristic of your organism. Be prepared to discuss the position of your organisms in evolution and/or the ecosystem (participation grade). COLLECTING RULES: 1. Organism contained, but observable 2. Alive or freshly collected 3. Small quantities of each species 4. No endangered or threatened species (> 10 at site; familiar in other locations) 5. No violations of local, state, federal or international laws If bringing a microscopic organism, you may bring a sample of a habitat specific to a species and you must describe the species living in the habitat. You may also bring an Internet photo of the species to accompany the habitat sample. Prior preparation and key terms to study: Review information in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life Cell Structure and Function Metabolism Cell Reproduction ORIGIN OF LIFE Kingdoms Archaebacteria, Eubacteria and Protista Life on Earth Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : “Evolutionary Tree” and “Plant/Animal Evolution” Kingdom Fungi DATE: April 17 (required attendance – OUTDOOR lecture and lab combined) LECTURE TOPIC: Plant Kingdom Homework Due: Plants (homework grade) Prior preparation and key terms to study: Review information in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Characteristics and Study of Life Chemistry of Life 9 Cell Structure and Function Metabolism Cell Reproduction ORIGIN OF LIFE Kingdoms Archaebacteria, Eubacteria and Protista Life on Earth Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : “Evolutionary Tree” and “Plant/Animal Evolution” Kingdom Plantae Plant Homework Due: After reading the lecture notes and related text material, collect 2 of the following 6 (homework grade): a. fresh flower b. fresh cone, male c. fresh cone, female d. fresh fruit, sliced to reveal seeds e. fertile fern frond f. 1 inch square patch of moss with both gametophyte and sporophyte generations attached For Extra Credit, bring an example of each of the six items above. Be prepared to discuss where each of these fits in the evolution of plants and what animals co-evolved with each. DATE: April 21 LECTURE TOPICS: Domain Eukarya Kingdom Animalia (The Primitive Phyla) View the DVD: “Introduction to the Invertebrates” and complete the study guide. Prior preparation and key terms to study: Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : Evolution ORIGIN OF LIFE Kingdom Animalia (The Primitive Phyla) “Evolutionary Tree” and “Plant/Animal Evolution” DATE: April 24 LECTURE TOPICS: Domain Eukarya, Kingdom Animalia: The Protostomes View the DVD "Swarming Hordes" (16 min.) Chapter 4 of the BBC production “David Attenborough's Life on Earth” and complete the study guide. The Deuterostomes: Phylum Chordata View the “Life on Earth” DVD and complete associated study guides. Prior preparation and key terms to study: 10 Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : ORIGIN OF LIFE Kingdom Animalia (The Higher Phyla) “Evolutionary Tree” and “Plant/Animal Evolution” DATE: April 28 LECTURE TOPICS: Domain Eukarya Kingdom Animalia: The Deuterostomes Phylum Chordata Class Mammalia Order Primates View the “Life on Earth” DVD and complete associated study guides. Prior preparation and key terms to study: Study terms outlined in the following lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm : ORIGIN OF LIFE Kingdom Animalia (The Higher Phyla) Animalia Phylum Chordata The Mammals “Evolutionary Tree” and “Plant/Animal Evolution” DATE: May 1 (required attendance – OUTDOOR FIELDTRIP lecture and lab combined) LECTURE TOPIC Animal Behavior Project Identify at least 12 distinct behaviors of animals in the field as defined by the terminology in the study guide and/or your text book. Prior preparation and key terms to study: Study terms outlined in the Animal Behavior lecture notes located online at http://www.clab.cecil.edu/bolsen/BIO/132/BIO132_lecture_notes.htm Study the following terms in your text book: Symbiosis Mutualism Commensalism Parasitism Host Predator Prey Herbivore Carnivore Omnivore 11 Decomposer Autotroph Heterotroph FINAL EXAM (required attendance, except those with academic exemption) Prior preparation and key terms to study: Study all notes and text material covered during the course. This will be a multiplechoice exam. No essay questions are offered. DATE: May 5: If class prefers open text/note time during the exam, unanimous vote by students can move the exam from May 11 to May 5. DATE: May 11: This exam will be closed book/notes. 12